G61502


Basic Information

Item Value
gene id G61502
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 5570404 ~ 5573893 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU91050
aCTATTTTAtgttacacacttcaccttaaAGTTGTAAATAACCAAGTATATTCCTTAAAATGagataatgaaaatgaatctcAGTCAACACATGAAGACCCTCCCCGTCCCCAGCTATATGGTATCGTCCGGAAATACCTGTGAACGTCTCATTATTTGGTACGACTCATTATGCCACTGCATCAAACTGAGGGTCTACCACATATGGCAGAAGAGTGTGTATGAAGGATGGGCCTGTCATTTCCACAGCTCACAAGGACAAAcgcaacattttttatttttaaagataataaagacATATGAGGACTGATTCCATGTCAGCTTACAGATCTATGTATTCCAGTGTCCTTAAACACGACGCCAAATCTGAATATCCCTCTTTAGGACACATATAAACAACCGGCCCGACaaatcacacacatatacacacacacacacacacacagagctcaaGGGTGTGTTTGTTACAAAGAACAGACAGACGTACCCATCAATATCGATGATTAACTGGAAACAGTCACAGTACAACCCAACCTCAAATAAACCATGACGACACAAGGTTAAACCATGGTGACTTTGCCAACATGTCCAGTTAAAGCTTCTTAAAATAGAAgtctttaattaaataagatTCTGTTTAATCTAAACAATATCCTAATCTACACCTGATTCTACTTTCATTAAAAGATTACTCCCTACCATGTCAAGTCAAACTTATTTTTACTAGTGGTCGGCcaatactgtttttgtttttgacagccGATGCCAATATCTTGGAAAGCAGGGCTGATGGCCATtatcttaaattatattaagtAAATTGCATGGCAATCAATATGCTTTCACACAATGAGTTTCAATATGTGTTGacacaaattacttttttgaacCCATTGATACAACATGGCACTGAGAAAAGAAATGCGTAGAAACGTTATTCTTTGACGCCAGGAACCGATGAATAAtctactcacccccaagccatcctaggagtatatgaatttcttctttcagatgaacacagtctgaattaaaaaaaaaaacactggccaatttagtgttggaggtttcatggctaccattcattgattgcacattccaccagtaagagcagagaTTGAAGGTTTTAATAACAGAGAAttgcacagttttgcttaaaatattgcaatgcacacaacactatgggtgacatatcagagttcaaaagaggacacattgttggtgcacgtcttgctgcgcatctgtgacccagacagcaagtctttgtgatgtatcaagagccacggtatccagggtaatgtcagcataccaccgAGAAGGacgaaccacatccaacaggagtaactgtggacgtaagaggaagctgtctgaaagggatgtccgggTGCTAACCCAGATTGTATccagaaaacataaaaccacagatttcccaactcactgcagaattaaatgtgcacctcagCTCTCCTGTTTCCAACAAAACTGTCCGTCAGGGGCTCCACAGGATCAATATACATGGCCGGGGTGCTATAGCCAACCCTTTGGTCACTCGTGTCCAATGCCAAACGTCGGTTTCAATGGTGCCAGCAGAgaaaatcttgggctgtggacaatgtgaaacatgtattgttctctgatgagtccaaCTTCACTGTCTTTCACACATCCGGGAGAGTTAGGgtgtggagaagccccaaagaagcgtACCACCTAGACTgttgcatgcccagagtgaagcatgggaGTAgttcagtgatggtttgggctgcaatatcacGGCATTCCCTAGACccaatacttgtgctagatggaCGCATTACTGCCAAGGACTACagaaccattctggaggaccatgttCACCCAGTGGTTGAAACATTGCATCCTGAAGGCGGTGCcgtatcaggatgataatgcaccaatacacacagcaagactggtgacagagtggttaGATGAACATaaaagtgaagttgaacatctccTATAGCCTGCACAGTCACCTGATCTAAATATCATTGAGctactttggggtgttttggaggagcgcGTCAGGAAACgttcctccaccagcatcacatagtgacctggccactattctgcaagaagaataGCTCAAAATAtcactgtgcaggacttgtatctgtcattcccaagacCAATTGCAAAAGGAAGCCCTACACCATACTAGtgaattattgtggtctaaaaccaggcattttagtttcattgtccatttatttatatacacatctGTGGTTCAATGATCGCTTCATGCTCTTCTCCAAGCACACGGGAGTGTTTGATAGCTGCATCTATTAGCCGATCCACCGATAGACACTGAACAGCACTGTGTTGGCAGCAAATGGGCGTTTACAAAATGGTATCAGTCTGGCAAACTAATAACATTGACAAGCAAATAAAGTTGGATATAATATCACTGGGCACTAACACggtttacatttttgggtccTTAAACCGAGacttgttttataatgtatactGCTTTAAGTGAGTATACTGAATGTATGCAGGTAAAGTAGGACGTGCTTTAATATACTACTGAATGATAATCCAATGCACTGTACGTGCCACTTACAGCAccttcaaaagaaatgaaaggcTAAACTGTCATGAATATATTAGGTTTTTGATATACATCAGGGTGTGTCTGTATATGTTTTACAGTTGCTgcataatttgtaattaattattaatttagtaattaattcaagttattaatattattgggTGCTATAGTTCTTTTAAAAGAACCAGGGCTGACCAATCACATTACAGATCAGCTATGACATCCCTCTGATATTAAACTAAGAAGGAAAAGGTTGATGTGCAACTTAAAATACGcgttttgattttcattttctgcactTCCCTTTAGCTTTTCTTCACAAACGCACTCTTCCCCTCGTCCCCCGTCGGCGTGCTGCTCTAATTGGAGGACTCTGCCTGCAGATATCTACCCTCAGACTACAACGGAAGCGTACAATTAGTGTGGACATGTGCATTTGTTTGGCTCTCCACAAGCGCTCGGATAGTGCGCTATGCAGCAAATAAAACTAATCCACAGAGATAAAGTGAATAAAGGGCCTGATGCTGATAAGCCAAGACAGCTCTCCTCCTGCGCTGGGCTGTTTTCTGTGGGTGGCTAGTGGAGATATTGTTCATAAGACTGTGATGAGAAAGACAGATAGCGAGAGAGCTAAAGATGCTGCATCATTTGAAGCAGGGGTGGGAATCTTCAGGCACTTCACGATCCGATTCGGATTCTGGGAGTCACTATTCGATTCCAAAACGATTCTAGATCAACATTTTTCACCCAGTTAAATCTTCTGCACAAATGCATCCTTACAACTTAACATCTTAAACAACACTGGGGTTTCCA

Function

GO:

id name namespace
GO:0005886 plasma membrane cellular_component
GO:0071944 cell periphery cellular_component

KEGG:

id description
ko05031 Amphetamine addiction
ko05033 Nicotine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
TU91050 True 3400 lncRNA 0.41 2 5570404 5573893

Neighbor

gene id symbol gene type direction distance location
unc45b unc45b coding downstream 95610 5466567 ~ 5474794 (-)
LOC122350623 LOC107725301,LOC107664996,LOC107674340,LOC107598970,LOC107734523 coding downstream 105681 5458354 ~ 5464723 (-)
tasor2 LOC107664996,LOC107725301,LOC107598970,LOC107566806 coding downstream 112224 5446068 ~ 5458180 (-)
plekha2 si:ch211-204d2.4,LOC107599050,LOC107725306,LOC107734508,LOC107566813,LOC107683853 coding downstream 126824 5437353 ~ 5443580 (-)
asb13b asb13b,asb13,LOC107725307,LOC107599049,LOC107664994,LOC107734516,LOC106561665 coding downstream 133574 5431949 ~ 5436830 (-)
fnbp1a fnbp1a,fnbp1,LOC107757295 coding upstream 44656 5618549 ~ 5638757 (-)
anapc7 anapc7,LOC107674331,LOC107664992 coding upstream 113377 5687270 ~ 5692999 (-)
rapgef1a rapgef1a,LOC107598978,LOC107725290,LOC107757300,LOC107664972,LOC107674295 coding upstream 120039 5693932 ~ 5717191 (-)
med27 med27,LOC107557205,LOC107665006,LOC107757301,LOC107725311 coding upstream 161628 5735521 ~ 5782271 (-)
phf19 phf19,LOC107599052,LOC107757290,LOC107674297,LOC107557185 coding upstream 489375 6063268 ~ 6091611 (-)
G61476 NA non-coding downstream 204056 5323112 ~ 5366348 (-)
G61478 NA non-coding downstream 217947 5336987 ~ 5352457 (-)
G61459 NA non-coding downstream 304366 5143199 ~ 5266038 (-)
G61216 NA non-coding downstream 564838 4961583 ~ 5005566 (-)
G61215 pim1,LOC107584899,LOC107598956,LOC107734527,LOC107674355,LOC107653400,LOC107725309,LOC107391354 non-coding downstream 567521 5001567 ~ 5002883 (-)
G61507 NA non-coding upstream 9022 5582915 ~ 5584720 (-)
G61525 atp2a2,atp2a2a,LOC107674294,LOC107757297,LOC107557188 non-coding upstream 99748 5673641 ~ 5675178 (-)
G61526 atp2a2,LOC105014188,LOC108444117,LOC107397196,LOC107725304,LOC106585469,LOC106514585 non-coding upstream 102097 5675990 ~ 5676748 (-)
G61519 NA non-coding upstream 111267 5685160 ~ 5687209 (-)
G61538 NA non-coding upstream 166182 5740075 ~ 5740438 (-)
pip5k1bb pip5k1bb,LOC107664977,LOC105901155,LOC107566804,LOC108412809,LOC108265367,LOC108234418 other downstream 59461 5476213 ~ 5510943 (-)
nr1h5 nr1h5,LOC107653410,LOC107598964,LOC107725330,LOC107674374,LOC107734534,LOC107570978 other downstream 219125 5341394 ~ 5351279 (-)
LOC122349940 fnbp1,fnbp1a,LOC107720911,LOC107675683,LOC107661630,LOC107757295,LOC107674371 other downstream 362882 5195752 ~ 5207522 (-)
LOC122350811 NA other downstream 382483 5187254 ~ 5187921 (-)
G61071 LOC107601747,LOC107653424,LOC107734537,LOC107674377,LOC107578221 other downstream 1173330 4393213 ~ 4397074 (-)
c8h9orf116 LOC107757294 other upstream 31279 5605172 ~ 5609572 (-)
G61513 NA other upstream 40436 5614329 ~ 5617664 (-)
LOC122350596 LOC107557202,LOC107757303,LOC107725315,LOC107674335 other upstream 346068 5919961 ~ 5961106 (-)
LOC122350671 fibcd1,LOC107739453,LOC108428067,LOC102776889,LOC107596897,LOC107700935,LOC105015243,LOC106936583 other upstream 849849 6423742 ~ 6442982 (-)
LOC122350104 LOC107755295,LOC107665061,LOC107598999 other upstream 1240578 6814471 ~ 6816747 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_006522 NA non-coding NC_007124.7 CM002897.2 14950795 ~ 14981580 (-)
grasscarp (Ctenopharyngodon idella) G238754 NA non-coding CI01000055 null 2216637 ~ 2228752 (+)
mexican tetra (Astyanax mexicanus) G162181 NA non-coding NC_035914.1 CM008317.1 32609750 ~ 32610194 (-)