G61550 (endog)


Basic Information

Item Value
gene id G61550
gene name endog
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 5845963 ~ 5967122 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU91143
TTCCCAAAACCTGATACTTCACATACATTTTCCCGCCAGGTTCCTGTCTGCGGTGACACATTGCTCAGGTAGAAGGTGTCATCCATGGCTTTCTGACTCCATTTGTGATTGGCTGCTGCAGCCAGGTGACCCCTGTCAAATCCACTGCCCTTGTAATCCGCATTGCTCGATCTGTGGTAAACATGAACCGAGTCGTCCTCTTTGAATTCGCAGAACTTTCTGTCCGAGGTCCCGGTTACCGTGTCGGGGTTGAGCTGCTCTATGACCCAGGCCGCGGTCCTGTTTCTGGGGTCGTATGAGGTCACGTAAGACTCTCTGTTCTTGATGTTGGACAGGGAAGGAAAGCCGTACTTCATCACAGCCGTGGATCTGCTCACAGCGAGCTGTCCCGGCTGGTACGGGCTGATCTCTGACGCCGCGTCGACGCTCGGGATGGGGATGACCGGGACGCGGTCCAGCAGCCCGCCGCTGTGACTCGTCTCCCGTGTTTTGTTAAGGCGATCGCCGGTTGCTGTCAAGGTGGCACCGATGCCTATGCCAGCTGTCACCGACAGCCCGGATAATACCCACCGCGAGCGGAAGACACGATGCATCATTCACacttaataaatacagttaattaaattaaacgaaTAAAGTGCAGTTGTTTTCCCCACTGTATGTACATGACCCGCGTGAGTCGGTCTCACCGGTTAAACAAAC

Function

symbol description
endog Predicted to enable endoribonuclease activity and single-stranded DNA endodeoxyribonuclease activity. Predicted to be involved in apoptotic DNA fragmentation. Predicted to be active in mitochondrial inner membrane and nucleus. Orthologous to human ENDOG (endonuclease G).

NR:

description
PREDICTED: endonuclease G, mitochondrial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU91143 True 702 lncRNA 0.54 3 5845963 5967122

Neighbor

gene id symbol gene type direction distance location
med27 med27,LOC107557205,LOC107665006,LOC107757301,LOC107725311 coding downstream 63692 5735521 ~ 5782271 (-)
rapgef1a rapgef1a,LOC107598978,LOC107725290,LOC107757300,LOC107664972,LOC107674295 coding downstream 128772 5693932 ~ 5717191 (-)
anapc7 anapc7,LOC107674331,LOC107664992 coding downstream 152964 5687270 ~ 5692999 (-)
fnbp1a fnbp1a,fnbp1,LOC107757295 coding downstream 207206 5618549 ~ 5638757 (-)
unc45b unc45b coding downstream 371169 5466567 ~ 5474794 (-)
phf19 phf19,LOC107599052,LOC107757290,LOC107674297,LOC107557185 coding upstream 96146 6063268 ~ 6091611 (-)
traf1 traf1,LOC107599053,LOC107664983,LOC107709033,LOC107674383,LOC107557184 coding upstream 126929 6094051 ~ 6105276 (-)
LOC122351122 si:dkeyp-51b7.3,fibcd1,LOC107598982,LOC107665003,LOC107725318,LOC108438350,LOC107557183,LOC106585783 coding upstream 141470 6108592 ~ 6199280 (-)
LOC122350067 LOC107598986,LOC107725298 coding upstream 503577 6470699 ~ 6473683 (-)
slc2a6 slc2a6,LOC107725299,LOC107599026 coding upstream 507634 6474756 ~ 6478894 (-)
G61538 NA non-coding downstream 105525 5740075 ~ 5740438 (-)
G61519 NA non-coding downstream 158754 5685160 ~ 5687209 (-)
G61526 atp2a2,LOC105014188,LOC108444117,LOC107397196,LOC107725304,LOC106585469,LOC106514585 non-coding downstream 169215 5675990 ~ 5676748 (-)
G61525 atp2a2,atp2a2a,LOC107674294,LOC107757297,LOC107557188 non-coding downstream 170785 5673641 ~ 5675178 (-)
G61507 NA non-coding downstream 261243 5582915 ~ 5584720 (-)
G61554 LOC102215562 non-coding upstream 56873 6023995 ~ 6024838 (-)
LOC122350056 NA non-coding upstream 236901 6204023 ~ 6205458 (-)
LOC122350799 LOC107725298,LOC107598986 non-coding upstream 306762 6273884 ~ 6275210 (-)
G61582 NA non-coding upstream 500831 6467953 ~ 6468416 (-)
G61629 NA non-coding upstream 584282 6551404 ~ 6551711 (-)
G61513 NA other downstream 228299 5614329 ~ 5617664 (-)
c8h9orf116 LOC107757294 other downstream 236391 5605172 ~ 5609572 (-)
pip5k1bb pip5k1bb,LOC107664977,LOC105901155,LOC107566804,LOC108412809,LOC108265367,LOC108234418 other downstream 335020 5476213 ~ 5510943 (-)
nr1h5 nr1h5,LOC107653410,LOC107598964,LOC107725330,LOC107674374,LOC107734534,LOC107570978 other downstream 494684 5341394 ~ 5351279 (-)
LOC122349940 fnbp1,fnbp1a,LOC107720911,LOC107675683,LOC107661630,LOC107757295,LOC107674371 other downstream 638441 5195752 ~ 5207522 (-)
LOC122350671 fibcd1,LOC107739453,LOC108428067,LOC102776889,LOC107596897,LOC107700935,LOC105015243,LOC106936583 other upstream 456620 6423742 ~ 6442982 (-)
LOC122350104 LOC107755295,LOC107665061,LOC107598999 other upstream 847349 6814471 ~ 6816747 (-)
xpr1a xpr1a,LOC107758009,LOC107755298,LOC107699288,LOC107665065,LOC107603171,LOC107599040 other upstream 908227 6875349 ~ 7056429 (-)
lhx4 lhx4,LOC107699337,LOC107550233,LOC107758007,LOC107599001,LOC107755297,LOC107665078 other upstream 1124328 7091450 ~ 7102993 (-)
spata6 LOC107657881,LOC107699473,LOC107549716,LOC107757996,LOC107599047 other upstream 1710374 7677496 ~ 7687562 (-)

Expression


Co-expression Network