G28959


Basic Information

Item Value
gene id G28959
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 8906172 ~ 8906381 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU32758
ACTGCTTTTTTATTTTGTGATGGTTGTTCATGAGTCCCTTGTTTGTTCTGAACAGTTAAACTGAGCTCTGTTCTTCAGAAAAAATCTCCACGTCCTGCAGATTCTTCAGTTTGAGCATTTTTTGCATATTTGAATCCTTTACAGCAGTGACTGAATGATTTTGAGATCCATCTTTTCACAGTGAGGACAACTGAGGGACTCAAACACAAC

Function

NR:

description
PREDICTED: photoreceptor outer segment membrane glycoprotein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU32758 True 210 lncRNA 0.38 1 8906172 8906381

Neighbor

gene id symbol gene type direction distance location
CI01000004_08875722_08877149 GM11353, RPS8A, RPS8 coding upstream 28665 8875722 ~ 8877507 (+)
CI01000004_08866163_08873681 HECTD3 coding upstream 32376 8866034 ~ 8873796 (+)
CI01000004_08823382_08844233 NA coding upstream 61827 8822749 ~ 8844345 (+)
CI01000004_08806791_08812203 NA coding upstream 93610 8806791 ~ 8812562 (+)
CI01000004_08746864_08765484 NA coding upstream 140267 8746484 ~ 8765905 (+)
CI01000004_08947119_08949558 NA coding downstream 40738 8947119 ~ 8949644 (+)
CI01000004_08976512_08980033 TTPA coding downstream 69873 8976254 ~ 8980984 (+)
CI01000004_08987501_08991239 NA coding downstream 80777 8987158 ~ 8991469 (+)
CI01000004_08996083_08997863 NA coding downstream 89702 8996083 ~ 8997863 (+)
CI01000004_09002274_09004879 IMPA1, IMPA1.3 coding downstream 95661 9002042 ~ 9005023 (+)
G28955 NA non-coding upstream 9930 8895462 ~ 8896242 (+)
G28947 NA non-coding upstream 23572 8882396 ~ 8882600 (+)
G28933 NA non-coding upstream 44262 8861235 ~ 8861910 (+)
G28909 NA non-coding upstream 223167 8682707 ~ 8683005 (+)
G28905 NA non-coding upstream 231971 8673758 ~ 8674201 (+)
G28968 NA non-coding downstream 16102 8922483 ~ 8922685 (+)
G28969 NA non-coding downstream 16341 8922722 ~ 8922940 (+)
G28971 NA non-coding downstream 19414 8925795 ~ 8926080 (+)
G28973 NA non-coding downstream 20764 8927145 ~ 8927490 (+)
G28975 NA non-coding downstream 30038 8936419 ~ 8938863 (+)
G28859 NA other upstream 306569 8599235 ~ 8599603 (+)
CI01000004_08414451_08436256 NA other upstream 454945 8414316 ~ 8439933 (+)
CI01000004_07654234_07655677 MRPL34 other upstream 1249789 7654234 ~ 7656383 (+)
CI01000004_06571261_06572539 SEP15 other upstream 2331751 6570771 ~ 6572667 (+)
G28302 NA other upstream 2404085 6470028 ~ 6502087 (+)
G30797 NA other downstream 1590995 10497376 ~ 10497788 (+)
G31710 NA other downstream 2730870 11637251 ~ 11642400 (+)
CI01000004_11666900_11667179 NA other downstream 2758392 11666900 ~ 11667659 (+)
G31865 NA other downstream 3285749 12192130 ~ 12197418 (+)

Expression


Co-expression Network