G62788


Basic Information

Item Value
gene id G62788
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 10152239 ~ 10152905 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU92936
CTGAGTTAGACAGAGAGGAGAATACATCATGTTGAAAGGGGAGCGCGTGACTTGAAATGTGGCAAAACACCGACAAGTTAGTGGATCATTTTTCACAGTTAATCATGGTAAGCCTCATCATGATTAACACTTCCACCGCCGCCACTTCTGACTTCCACTTCGAGTCCGTTAAATCAAGAGACGCCCGGCAAAAGAGAACGCGCAAACTCTGTACACGTTTGAAACCAAACTTTGCTGGCAGGAAAACGCGTGGGGTGCTGCAATCTGTTCCATTTAGGAAATGGTGGGAGAAAGaatcaaagaaagagaaaatgaaaaagagggAGGAATGAAATGACGTTATGAAAATAGCCCATCCCAAAGAAAGTACTTGAAGGAGCAAGAGAGGCTAACTCTGGTTTCCGATGTCCGTGGGCATCCGTTATATCCGTGAAattaacaacaacacaaaaaaaagttatttgccTCGGTTTGTGAAGCTCGTGTGGTGCGAAACAAAGTGGCAAACGACTTTCTCCCGTGTTCGCCAGTGCGCGCGCACCGCTCTTCCCTCTCGCGCCGCTGCGGTTCGGAGGCAGAGACGTTCTGCGCGCTTCAGCCGCGCGCGTATTCCAAACAATTTTACTGCAACACGCACCGCTAAAGTAGCGATTAGAGCCAGGCTCGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU92936 True 667 lncRNA 0.48 1 10152239 10152905

Neighbor

gene id symbol gene type direction distance location
myo1f myo1f,LOC107750961,LOC107585872,LOC107548903,LOC107731286,LOC107695252,LOC108413823 coding downstream 157131 9979636 ~ 9995108 (-)
acer1 acer1,LOC107731201,LOC107676796,LOC107585930,LOC107550428 coding downstream 175477 9970128 ~ 9976762 (-)
rfx2 rfx2,LOC107676724 coding downstream 219228 9900496 ~ 9933011 (-)
lpxn LOC107676702,LOC107717550,LOC107585869,LOC107695247,LOC107750911 coding downstream 295633 9852232 ~ 9856606 (-)
trabd2b si:ch211-120j21.1,LOC107717551,LOC107585868,LOC107676673,LOC107695245,LOC107548850,LOC108442342 coding downstream 314789 9786252 ~ 9837450 (-)
dohh dohh,LOC107745802,LOC107548993,LOC107585881,LOC107695215 coding upstream 100985 10253890 ~ 10256950 (-)
LOC122349939 LOC107731225,LOC107701761,LOC107585934,LOC107745801,LOC107550447,LOC100005423 coding upstream 104240 10257145 ~ 10259192 (-)
haus5 LOC107731222,LOC107585885,LOC107745798,LOC107695262 coding upstream 111936 10264841 ~ 10271997 (-)
si:dkeyp-82a1.6 LOC107550035 coding upstream 127398 10280303 ~ 10284362 (-)
zgc:112962 LOC107695265,LOC107745796 coding upstream 131587 10284492 ~ 10291110 (-)
LOC122350767 NA non-coding downstream 1248 10127885 ~ 10150991 (-)
G62768 NA non-coding downstream 74587 10077417 ~ 10077652 (-)
G62749 mob3a,LOC107695254,LOC107585875,LOC104921817,LOC103368804,LOC107731185,LOC103137270 non-coding downstream 94311 10055051 ~ 10057928 (-)
G62670 NA non-coding downstream 108841 10043188 ~ 10043398 (-)
G62576 NA non-coding downstream 420085 9731906 ~ 9732154 (-)
G62789 NA non-coding upstream 4070 10156975 ~ 10157193 (-)
G62795 NA non-coding upstream 97728 10250633 ~ 10253256 (-)
G62800 NA non-coding upstream 110913 10263818 ~ 10264761 (-)
G62805 NA non-coding upstream 148757 10301662 ~ 10301885 (-)
G62817 NA non-coding upstream 172836 10325741 ~ 10327208 (-)
adamts10 adamts10,LOC107676806,LOC107585873,LOC107731268,LOC107695212,LOC107549976,LOC106613844 other downstream 110470 9995547 ~ 10041769 (-)
mllt1a mllt1a,LOC107731200,LOC107676782,LOC107695250,LOC107549968,LOC107585916 other downstream 182754 9954681 ~ 9969485 (-)
fam78bb fam78bb,LOC107717547,LOC107676968,LOC107751100,LOC107550401,LOC107585866,LOC107695225 other downstream 443618 9700394 ~ 9708621 (-)
mindy4 LOC107699968,LOC107585839,LOC107548580 other downstream 889413 9257243 ~ 9262826 (-)
pola2 pola2,LOC107599808,LOC107657899 other downstream 1494953 8652304 ~ 8657286 (-)
smim24 smim24,LOC107580287 other upstream 92291 10245196 ~ 10248156 (-)
G62760 gpr37l1b,LOC107585901,LOC107731282,LOC107668115,LOC107549203,LOC107695275,LOC107745785,LOC108441645 other upstream 236278 10389183 ~ 10392043 (-)
G62826 cry1ba,LOC108265656,LOC108441644,LOC103461922,LOC105026018,LOC102226488 other upstream 287859 10440764 ~ 10480051 (-)
trnar-ccg_26 NA other upstream 387314 10540219 ~ 10540291 (-)
cep104 cep104,LOC107668088,LOC107745778 other upstream 820400 10973305 ~ 10990735 (-)

Expression


Co-expression Network