G28992


Basic Information

Item Value
gene id G28992
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 8983490 ~ 8983703 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU32795
GAATGCAAAGTCAGTGTTTAACAGAATTATAGTTTCAACCAGTTTTAACTTCGTGTGAGTAAAGCTACACACTAGTGCTCCTAAATTTTAGGATGAGGTGGACAAAAGCAGAAAGGGGGTGGGGCGCAACAATGGGACAATTTATACCAAGAAAAAAGAACAAAGTTTTCGTTGTTAATTTCACCCCCTCACAATATATAGCACTATTAGGACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU32795 True 214 lncRNA 0.43 1 8983490 8983703

Neighbor

gene id symbol gene type direction distance location
CI01000004_08976512_08980033 TTPA coding upstream 2532 8976254 ~ 8980984 (+)
CI01000004_08947119_08949558 NA coding upstream 33846 8947119 ~ 8949644 (+)
CI01000004_08875722_08877149 GM11353, RPS8A, RPS8 coding upstream 105983 8875722 ~ 8877507 (+)
CI01000004_08866163_08873681 HECTD3 coding upstream 109694 8866034 ~ 8873796 (+)
CI01000004_08823382_08844233 NA coding upstream 139145 8822749 ~ 8844345 (+)
CI01000004_08987501_08991239 NA coding downstream 3455 8987158 ~ 8991469 (+)
CI01000004_08996083_08997863 NA coding downstream 12380 8996083 ~ 8997863 (+)
CI01000004_09002274_09004879 IMPA1, IMPA1.3 coding downstream 18339 9002042 ~ 9005023 (+)
CI01000004_09173580_09175411 NA coding downstream 188049 9171752 ~ 9175657 (+)
CI01000004_09185502_09218621 NA coding downstream 201132 9184835 ~ 9218642 (+)
G28989 NA non-coding upstream 9852 8971829 ~ 8973638 (+)
G28929 NA non-coding upstream 12859 8967015 ~ 8970631 (+)
G28976 NA non-coding upstream 44315 8938966 ~ 8939175 (+)
G28975 NA non-coding upstream 44627 8936419 ~ 8938863 (+)
G28973 NA non-coding upstream 56000 8927145 ~ 8927490 (+)
G28994 NA non-coding downstream 34102 9017805 ~ 9021061 (+)
G28999 NA non-coding downstream 40349 9024052 ~ 9024252 (+)
G29010 NA non-coding downstream 57381 9041084 ~ 9042246 (+)
G28980 NA non-coding downstream 225404 9209107 ~ 9211614 (+)
G30120 NA non-coding downstream 313553 9297256 ~ 9297656 (+)
G28859 NA other upstream 383887 8599235 ~ 8599603 (+)
CI01000004_08414451_08436256 NA other upstream 532263 8414316 ~ 8439933 (+)
CI01000004_07654234_07655677 MRPL34 other upstream 1327107 7654234 ~ 7656383 (+)
CI01000004_06571261_06572539 SEP15 other upstream 2409069 6570771 ~ 6572667 (+)
G30797 NA other downstream 1513673 10497376 ~ 10497788 (+)
G31710 NA other downstream 2653548 11637251 ~ 11642400 (+)
CI01000004_11666900_11667179 NA other downstream 2681070 11666900 ~ 11667659 (+)
G31865 NA other downstream 3208427 12192130 ~ 12197418 (+)
CI01000004_12646972_12652534 NA other downstream 3659051 12646838 ~ 12652570 (+)

Expression


Co-expression Network