G62977


Basic Information

Item Value
gene id G62977
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 11201695 ~ 11210161 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU93238
ACACACCTAAATCACACATGGTGCAGGGAAAACATTTAGTCAGTCCGTTGGGTTCATCTGTGTAAGTTGACGTAGAACAAGGAATACATGTCGTACTGGTATCTACAGTACAGTGCCAATAAACACGGTTTCCTACAGGAAtggcaaaatgtgtttttctttaaagaaagtGATATATATCATATCACAACATATCATATCATACAAATAGTCATGTAAAACGTTTTTTGATCAAGTGACTTCTTTGCTGCATCACATGACTTATCAACTGATCTGACAATTCTGTGTGCTTACAATAAAGTTTTACACCACAATTAGCCATAACATTACAGTATAACAATGCTGTATTTAAAGCATAACTGtacatttaacttaaaatttaaCTCAAGTCTTTAGAATCTATTAACTCTTAATTGCTATATTGGTTAACATTACACACAgaattaatataatacacaaCTTTTAAATGCTTAACAGATTTGAAAACACCAAGCAATATACAAACCTGGACACCATACACTAAACGTCACAATACACTATTGCACACTACATTATGTCTTGTTGTTATAGACATATGACAAACGAAAATATTCAGTTTCAAATTTAAACATTAGATAGActagatagaaaaaaaactagAGAGTCTTTACCTATCATAcaaaattctttctttttttttaattctttgaaaACGTTTAACAACTAGCATCCACTGGGCAAAATCTGTTATATAGTGTATTCCAGGTTTTTATACATAATCCAAAGTAGTATTTGTACTGTACCAGGGGCACACATGGGGCAGCATTCTCCATTCACATCATATTCAGCATGGGCACATCCACAGAAACCAAGTTTAAAACTAACAGCTATTATGACAGCAATTGTGGATATAATGGTCCTCAGCGATAATATATCCATATAAAATGCAAGCAAGGATATTTATTCCATCCAAATGAAGGAAAATGTTTCATCGTCAGATTTCATCAACCTTTCTGTTCTTCACTtcacattaaataatgaattagaTCCTGGTAACGTGGCATTCCTGTTCACTGAAGATATTTTAGGTCTCTGTTTGTATGCCTATAAAGGCTATTTCAGATCATGATGGTTGGTTCCCCCTcctttaaatgattaatttgatGGAGCCTTAAGGAGGCATTGGCAGAAAACTTCACCATCCACTTCTTCCTTTACATACATGGTCCCTCGAGTAAGTACAACAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU93238 True 1227 lncRNA 0.34 2 11201695 11210161

Neighbor

gene id symbol gene type direction distance location
LOC122349917 cep104,LOC107668088,LOC107745778,LOC107695283 coding downstream 42409 11141183 ~ 11159286 (-)
LOC122349916 cunh1orf174,LOC107731178,LOC107668010,LOC107745779,LOC107549271 coding downstream 64154 11134703 ~ 11137541 (-)
c8h1orf174 cunh1orf174,LOC107731178,LOC107668010,LOC107745779,LOC107549271 coding downstream 233608 10964582 ~ 10968087 (-)
LOC122350349 nphp4,LOC107695281,LOC107550077 coding downstream 239705 10826429 ~ 10961990 (-)
LOC122349966 NA coding downstream 668357 10529443 ~ 10533338 (-)
lrif1 NA coding upstream 12879 11223040 ~ 11228121 (-)
apex2 apex2,LOC107668008,LOC107550000,LOC107695293,LOC107549375,LOC107745771 coding upstream 19168 11229329 ~ 11232003 (-)
csde1 csde1,LOC107731193,LOC107549382,LOC107695294,LOC107549999,LOC107745769,LOC107668033 coding upstream 25313 11235474 ~ 11250583 (-)
porcnl LOC107731263,LOC107549961,LOC107668005,LOC107695296,LOC107550497,LOC107745836 coding upstream 40720 11250881 ~ 11256508 (-)
magixa magixa,LOC107731248,LOC107668068,LOC107549995,LOC107695301 coding upstream 141143 11351304 ~ 11392671 (-)
LOC122351000 NA non-coding downstream 376644 10819217 ~ 10825051 (-)
LOC122350960 NA non-coding downstream 401732 10755389 ~ 10799963 (-)
G62861 LOC107549259,LOC107745781,LOC107668121,LOC107555602 non-coding downstream 503570 10696335 ~ 10698125 (-)
G62835 alas2,LOC107731137,LOC107555603,LOC107549233,LOC107745783,LOC107667982 non-coding downstream 679208 10520659 ~ 10522487 (-)
G62831 NA non-coding downstream 767579 10431781 ~ 10434116 (-)
G62992 NA non-coding upstream 66198 11276359 ~ 11276914 (-)
G63014 NA non-coding upstream 196793 11406954 ~ 11441996 (-)
G63065 NA non-coding upstream 312861 11523022 ~ 11523638 (-)
G63071 NA non-coding upstream 324388 11534549 ~ 11534772 (-)
G63072 NA non-coding upstream 325882 11536043 ~ 11536517 (-)
smim1 smim1,LOC107668050 other downstream 32222 11131670 ~ 11169473 (-)
LOC122349915 nphp4,LOC107550077,LOC107695281 other downstream 70457 11096140 ~ 11131238 (-)
cep104 cep104,LOC107668088,LOC107745778 other downstream 210960 10973305 ~ 10990735 (-)
trnar-ccg_26 NA other downstream 661404 10540219 ~ 10540291 (-)
G62826 cry1ba,LOC108265656,LOC108441644,LOC103461922,LOC105026018,LOC102226488 other downstream 721644 10440764 ~ 10480051 (-)
LOC122350269 LOC107549994,LOC107731173,LOC107745767,LOC107695299,LOC107668028,LOC560461,LOC107549455 other upstream 74193 11284354 ~ 11345988 (-)
G63095 NA other upstream 352117 11562278 ~ 11615925 (-)
G63274 nt5dc2,LOC107731170,LOC107549943,LOC107668043,LOC107550186,LOC107678756,LOC107745746 other upstream 568110 11778271 ~ 11779251 (-)
prok1 prok1,LOC107680267,LOC107711938,LOC107731240 other upstream 841196 12051357 ~ 12054530 (-)
G63385 NA other upstream 1053533 12263694 ~ 12264533 (-)

Expression


Co-expression Network