G62992


Basic Information

Item Value
gene id G62992
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 11276359 ~ 11276914 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU93256
AGGTCATTCAGAAGGTATGGCTCCACCAGCTGTCCGAGGGGAGGGGAGGGTGGAGGCACAGGTGATCCACTGCTTGGGTAAGATCCTCTGTCCCCATTCAAGAAGTTTTGGAAGCTGATGTCGGTCTGGGTGCCGTTGTCCACACAGTCTGTGATAGCCATGAGCCGAGGTGTGCCAGCGGCTGCACCCAATCTTCTCCTGTGACCCTTACATACCACTTGAAGAAGCAGAGGATCATGAGGCTGCCCATCTTTGTCCTGGGACAGATGAGATGTTCTTCTGCCTTTGAGCTGCAGTGAGTGAAAAGAATGCCATTGAatgtccatttaaaaaaataatgcacttaTTGGTTGTTTTATGTGACACTTCTGAAAATGCTGAAGCAGCACTATGGAGAGAATGAAGTGGAgaaagagggagacagagataagaaaaatgagagaaggagagagagggatgataaatgcacaaataagcAAAACTCAAGGAAGGTTGTAGTTCTGCTCCTCCTTGGTGAGAAGTAACATTGCAAAGCAGCAAAAATGGCTATTGCAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU93256 True 556 lncRNA 0.47 1 11276359 11276914

Neighbor

gene id symbol gene type direction distance location
porcnl LOC107731263,LOC107549961,LOC107668005,LOC107695296,LOC107550497,LOC107745836 coding downstream 19851 11250881 ~ 11256508 (-)
csde1 csde1,LOC107731193,LOC107549382,LOC107695294,LOC107549999,LOC107745769,LOC107668033 coding downstream 25776 11235474 ~ 11250583 (-)
apex2 apex2,LOC107668008,LOC107550000,LOC107695293,LOC107549375,LOC107745771 coding downstream 44356 11229329 ~ 11232003 (-)
lrif1 NA coding downstream 48238 11223040 ~ 11228121 (-)
LOC122349917 cep104,LOC107668088,LOC107745778,LOC107695283 coding downstream 117073 11141183 ~ 11159286 (-)
magixa magixa,LOC107731248,LOC107668068,LOC107549995,LOC107695301 coding upstream 74390 11351304 ~ 11392671 (-)
emilin3a LOC107668027,LOC107731182,LOC107549958,LOC107550125,LOC107695222,LOC107745820 coding upstream 168359 11445273 ~ 11451446 (-)
si:dkey-70p6.1 LOC107731205,LOC107668067,LOC107745762,LOC107549481,LOC107549992 coding upstream 204730 11481644 ~ 11504032 (-)
ptk6a ptk6,LOC107731218,LOC107668051 coding upstream 292634 11569548 ~ 11575213 (-)
nol4la nol4la,LOC107549982,LOC107731219,LOC107745834,LOC107680239,LOC107550513,LOC107668103,LOC108412512,LOC103039117 coding upstream 302248 11579162 ~ 11615271 (-)
G62977 NA non-coding downstream 66198 11201695 ~ 11210161 (-)
G62974 NA non-coding downstream 70986 11197153 ~ 11205373 (-)
LOC122351000 NA non-coding downstream 451308 10819217 ~ 10825051 (-)
LOC122350960 NA non-coding downstream 476396 10755389 ~ 10799963 (-)
G62861 LOC107549259,LOC107745781,LOC107668121,LOC107555602 non-coding downstream 578234 10696335 ~ 10698125 (-)
G63014 NA non-coding upstream 130040 11406954 ~ 11441996 (-)
G63065 NA non-coding upstream 246108 11523022 ~ 11523638 (-)
G63071 NA non-coding upstream 257635 11534549 ~ 11534772 (-)
G63072 NA non-coding upstream 259129 11536043 ~ 11536517 (-)
G63073 NA non-coding upstream 261098 11538012 ~ 11538299 (-)
smim1 smim1,LOC107668050 other downstream 106886 11131670 ~ 11169473 (-)
LOC122349915 nphp4,LOC107550077,LOC107695281 other downstream 145121 11096140 ~ 11131238 (-)
cep104 cep104,LOC107668088,LOC107745778 other downstream 285624 10973305 ~ 10990735 (-)
trnar-ccg_26 NA other downstream 736068 10540219 ~ 10540291 (-)
G62826 cry1ba,LOC108265656,LOC108441644,LOC103461922,LOC105026018,LOC102226488 other downstream 796308 10440764 ~ 10480051 (-)
LOC122350269 LOC107549994,LOC107731173,LOC107745767,LOC107695299,LOC107668028,LOC560461,LOC107549455 other upstream 7440 11284354 ~ 11345988 (-)
G63095 NA other upstream 285364 11562278 ~ 11615925 (-)
G63274 nt5dc2,LOC107731170,LOC107549943,LOC107668043,LOC107550186,LOC107678756,LOC107745746 other upstream 501357 11778271 ~ 11779251 (-)
prok1 prok1,LOC107680267,LOC107711938,LOC107731240 other upstream 774443 12051357 ~ 12054530 (-)
G63385 NA other upstream 986780 12263694 ~ 12264533 (-)

Expression


Co-expression Network