G63407


Basic Information

Item Value
gene id G63407
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 12336114 ~ 12336823 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU93878
CTCAGATAGACTGAATTCTTCTTTGAAGTTGAATGGTTGAGCAGATTCCGGAACTATTCCAGAAATTAGTTCTTTGCCGTGAATAATAATCCTAAAAAGGGTTTTCACAAAGATTTTAACATTAGATTaaaatagccattgtaaaattTGAGTTTAGACTGGGAATGCTATAGTGTTGCAGGAATGAGTCCTAAAACCTGTGGATAGTGGTGGTGGTACTTTTTACTTCTGGTGAATGTATTTAGGCCTTAAATTTCTTCTGTGATCAAAACATGCTTCAAGTCATAGAGCTTGTTTTGTGAAATAACCCCAAAGTCAATACAAAACTCCTAGGAAACTGGTGTAATGGTAACCTATGGGTCTTCAGAATGATGCCATTCTTGAAGCTCTCTGTTGGTTGCCATGTTGGTTTGCTAAGAAAGACAGACCTGTCATAAGCGCAGCGTGTTTTTTCACGCACTGTAGTGTCTTGTTCATCTCTAATCAGCCAGTGAAACTTTGGGTCGCTCCTGAGTCGCACATTTTTCAGTCCTTTATTGGTAACATAGCTGCAAGCTGCATTTAAGTCCCCCAGAAACATCACATTCTAGTTTAGaaaggtaaaaaataattagatgTAATCTAGGAATGAACATTAAATCTATCTAATGAGTTTGGTGTACCTCTGTTTCCCATTTCCTCTTGACTGTTTGAAAGACATCATAAAGTGC

Function

GO:

id name namespace
GO:0043254 regulation of protein-containing complex assembly biological_process
GO:1902903 regulation of supramolecular fiber organization biological_process
GO:0032956 regulation of actin cytoskeleton organization biological_process
GO:0032970 regulation of actin filament-based process biological_process
GO:0030832 regulation of actin filament length biological_process
GO:0030833 regulation of actin filament polymerization biological_process
GO:0110053 regulation of actin filament organization biological_process
GO:0008064 regulation of actin polymerization or depolymerization biological_process
GO:0032271 regulation of protein polymerization biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU93878 True 710 lncRNA 0.37 1 12336114 12336823

Neighbor

gene id symbol gene type direction distance location
atp5pb atp5f1,LOC107668113,LOC107731279,LOC107679218,LOC107711984 coding downstream 8136 12324785 ~ 12327978 (-)
eps8l3b LOC107731156,LOC107668036,LOC107550496,LOC107591810,LOC107679192,LOC107711925 coding downstream 11695 12315716 ~ 12324419 (-)
gnat2 gnat2,LOC107668040,LOC107731158,LOC107550493,LOC107679180,LOC107591823,LOC108442114 coding downstream 53399 12276107 ~ 12282715 (-)
amigo1 amigo1,LOC107731278,LOC107550491,LOC107668119,LOC107711992,LOC107591818,LOC107679117 coding downstream 100376 12228692 ~ 12235738 (-)
sort1b sort1b,LOC107550487,LOC107668073,LOC107731125,LOC107591814,LOC107679020,LOC107711994 coding downstream 122545 12199611 ~ 12213569 (-)
prex1 prex1,LOC107731191,LOC107591805,LOC107679267,LOC107550458,LOC107668004,LOC107711923 coding upstream 26963 12363786 ~ 12425996 (-)
stk38a stk38,stk38a,LOC107669659,LOC107679274,LOC108265501 coding upstream 93602 12430425 ~ 12438331 (-)
sema3ga sema3ga,LOC107731285,LOC107550503,LOC107669661,LOC107591802,LOC107711922,LOC108442245,LOC108265594 coding upstream 126214 12463037 ~ 12478692 (-)
tspy LOC107550504,LOC107731226,LOC107711967,LOC107679295,LOC107591801 coding upstream 147628 12484451 ~ 12489040 (-)
suv39h1b suv39h1,suv39h1b,LOC107550505,LOC107679310,LOC107591797,LOC107669636,LOC108265881,LOC108442234 coding upstream 174628 12511451 ~ 12517641 (-)
G63406 NA non-coding downstream 93 12335766 ~ 12336021 (-)
G63404 NA non-coding downstream 1509 12332456 ~ 12334605 (-)
G63395 LOC107591850 non-coding downstream 31785 12302728 ~ 12304329 (-)
G63329 LOC107711999,LOC107550488,LOC107668094,LOC107731126 non-coding downstream 137747 12159189 ~ 12198367 (-)
G63321 NA non-coding downstream 196716 12104578 ~ 12139398 (-)
G63408 NA non-coding upstream 53 12336876 ~ 12337194 (-)
G63486 NA non-coding upstream 119225 12456048 ~ 12458857 (-)
G63490 NA non-coding upstream 153454 12490277 ~ 12491882 (-)
G63578 NA non-coding upstream 311819 12648642 ~ 12649214 (-)
G63579 LOC107679480,LOC107711917,LOC107669654,LOC107556492,LOC107717512,LOC107591779 non-coding upstream 313460 12650283 ~ 12652814 (-)
G63385 NA other downstream 71581 12263694 ~ 12264533 (-)
prok1 prok1,LOC107680267,LOC107711938,LOC107731240 other downstream 281584 12051357 ~ 12054530 (-)
G63274 nt5dc2,LOC107731170,LOC107549943,LOC107668043,LOC107550186,LOC107678756,LOC107745746 other downstream 556863 11778271 ~ 11779251 (-)
G63095 NA other downstream 720189 11562278 ~ 11615925 (-)
LOC122350269 LOC107549994,LOC107731173,LOC107745767,LOC107695299,LOC107668028,LOC560461,LOC107549455 other downstream 990126 11284354 ~ 11345988 (-)
kcnq2a LOC107679259,LOC107668096,LOC107731192,LOC107550457,LOC108442249,LOC108265949,LOC107711924 other upstream 5337 12342160 ~ 12363104 (-)
foxp3a foxp3a,si:ch211-167b20.8,LOC107669635,LOC107731227,LOC107550508,LOC107711972,LOC107679368,LOC107591799,LOC107591800 other upstream 152374 12489197 ~ 12504153 (-)
zmynd12 zymnd12,LOC107591768,LOC107711949,LOC107679700 other upstream 648831 12985654 ~ 13083372 (-)
tafa3b si:ch211-254n4.3,fam19a3,LOC107711931,LOC107591764,LOC107562776,LOC107669582,LOC102289964,LOC104918365,LOC106582736,LOC105921069,LOC106517667,LOC108231490,LOC106937909 other upstream 849044 13185867 ~ 13246130 (-)
mc3r mc3r,LOC107751459,LOC107669608,LOC107711834,LOC107680356 other upstream 1379805 13716628 ~ 13720514 (-)

Expression


Co-expression Network