tafa3b (si:ch211-254n4.3,fam19a3,LOC107711931,LOC107591764,LOC107562776,LOC107669582,LOC102289964,LOC104918365,LOC106582736,LOC105921069,LOC106517667,LOC108231490,LOC106937909)


Basic Information

Item Value
gene id tafa3b
gene name si:ch211-254n4.3,fam19a3,LOC107711931,LOC107591764,LOC107562776,LOC107669582,LOC102289964,LOC104918365,LOC106582736,LOC105921069,LOC106517667,LOC108231490,LOC106937909
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 13185867 ~ 13246130 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU94346
GGAGCGAGTCAGCGCAGCGCAGCGCTCCAGACCTTTGCCTTCAGCACCGGCAGATCCCGCACAGAGCGTCTCCAGCGCGGACCGACACAAGCCCGCCAGGATCTACGCGGGGTGATGGCTCCGTTGCAAACATCtgcgtgatttttttttaaaaccagacGCGAAAGCACTGATGTGAAGTTTCCCGCCGCTCTCATTTGAGTTGAGATGAAGATCTAAGACGCTGCGAGAGAAGGAACTTTGCGTCTCCGCGCACCCGGACGCCCTGCGGGGACACCGGGCGCTTCTGTGATCAGACGActgaacttctttttttttttttttttttgtatttgtgggtttctcactctctctgacAGAGTAGATATAGGAGGGATCCTTTGGTGCGGATTGTTCAAGCCTCTCCGGTTCGTGGATGGAATAACTCATAATGGAAGGGCAATGAGAGCCgtctctgctgctgctgggcAATAATCCGGACCACCGCACCAACAGTGCACGTGAAGGCTGGCACATGTGAGGTGATTGCAGCCCACCGCTGCTGTAACAGAAATAAGATTGAGGAGCGATCACAGACGGTTAAGTGCTCCTGCTTCCCAGGACAAGTCGCTGGAACAACGAGGGCTGCACCCTCCTGTGTGGATGcatcTATAGTAGCTCAGAAGTGGTGGTGTCAGATGCAGCCGTGTTTGGATGGTGAGGAGTGTAAAGTCTTGCCTGACCTCACAGGCTGGAGCTGCAGCACTGGAAACAAGGTGAAGACCACCAAGgtGACCCGATAGTTCTGCACTCCATGAAACCACCAGACCCAACTTACTGGGGACGAAAGTGCTGAAAGTGAAGACTAACTAGAGACAGCATTGAGCTTCAGCTAACAGGATCGATCGATATTAGTCAAACGAAGATTATTTGCGATCTGAGGAACAGACTGATCTCCAGAAATATATCCACCATAAACGTTAGGACCATCCTGAAGTTAATGTGTCCACTTCAACGGACCCCCTGGCCTTCCGGACGCTCAATCTTCTGGGTGTGGATCCACAACCTCAAAATGTGTTGGCTGGGGGGTCTCTATGTACgtatgcagttgtttttttttcttttttttacggAAGGCGTTTGGATCATCTACACCAGTGCAGCCCAATGGAGTTTAAGCTTATCAGCAACATGCCCTCCTTCCTTGTCCTTCAGTTCTTCCGGCAAATCCATAACCATCCCTGGTCTACCCGATCAGAAGGTCCGACCATTTCTTGTGGAATcctttaaacagcatttaaacatataaaacgATCTGGACCTTTAACGGACTCATCTTCTGTATATTGTTTGTTTCTAAATTAAAGCTTTTCAAGCCCACAGTCTGAAATAACAGATTAGATGTACCAGTATATtctagaaaatgtaaaagtgtaaaagCTCAAAGTGTTATTCTCAAAACAAGCAGAATAAAGTTAAAAGGTTATCacttttattatcaatgtttttatccAGCCTGGTAACTGCTATTGAGTACATGTGTCAGTATTatattcaataattaaaaatgtcgAAAATA
>XM_043246845.1
GAGTCAGCGCAGCGCAGCGCTCCAGACCTTTGCCTTCAGCACCGGCAGATCCCGCACAGAGCGTCTCCAGCGCGGACCGACACAAGCCCGCCAGGATCTACGCGGGGTGATGGCTCCGTTGCAAACATCtgcgtgatttttttttaaaaccagacGCGAAAGCACTGATGTGAAGTTTCCCGCCGCTCTCATTTGAGTTGAGATGAAGATCTAAGACGCTGCGAGAGAAGGAACTTTGCGTCTCCGCGCACCCGGACGCCCTGCGGGGACACCGGGCGCTTCTGTGATCAGACGActgaacttctttttttttttttttttttgtatttgtgggtttctcactctctctgacAGAGTAGATATAGGAGGGATCCTTTGGTGCGGATTGTTCAAGCCTCTCCGGTTCGTGGATGGAATAACTCATAATGGAAGGGCAATGAGAGCCgtctctgctgctgctgggcAATAATCCGGACCACCGCACCAACAGaatgCAGGAGCGGGCGGTACAGAGGGTGTGCGCGTGGCTCTTTCTGGTGATTTTGACCCTTCTGTCTCTCTGGGGTCATCTGTCTGATGCCTCCTCTCACCGCAGTCACATCGTGCACGTGAAGGCTGGCACATGTGAGGTGATTGCAGCCCACCGCTGCTGTAACAGAAATAAGATTGAGGAGCGATCACAGACGGTTAAGTGCTCCTGCTTCCCAGGACAAGTCGCTGGAACAACGAGGGCTGCACCCTCCTGTGTGGATGcatcTATAGTAGCTCAGAAGTGGTGGTGTCAGATGCAGCCGTGTTTGGATGGTGAGGAGTGTAAAGTCTTGCCTGACCTCACAGGCTGGAGCTGCAGCACTGGAAACAAGGTGAAGACCACCAAGgtGACCCGATAGTTCTGCACTCCATGAAACCACCAGACCCAACTTACTGGGGACGAAAGTGCTGAAAGTGAAGACTAACTAGAGACAGCATTGAGCTTCAGCTAACAGGATCGATCGATATTAGTCAAACGAAGATTATTTGCGATCTGAGGAACAGACTGATCTCCAGAAATATATCCACCATAAACGTTAGGACCATCCTGAAGTTAATGTGTCCACTTCAACGGACCCCCTGGCCTTCCGGACGCTCAATCTTCTGGGTGTGGATCCACAACCTCAAAATGTGTTGGCTGGGGGGTCTCTATGTACgtatgcagttgtttttttttcttttttttacggAAGGCGTTTGGATCATCTACACCAGTGCAGCCCAATGGAGTTTAAGCTTATCAGCAACATGCCCTCCTTCCTTGTCCTTCAGTTCTTCCGGCAAATCCATAACCATCCCTGGTCTACCCGATCAGAAGGTCCGACCATTTCTTGTGGAATcctttaaacagcatttaaacatataaaacgATCTGGACCTTTAACGGACTCATCTTCTGTATATTGTTTGTTTCTAAATTAAAGCTTTTCAAGCCCACAGTCTGAAATAACAGATTAGATGTACCAGTATATtctagaaaatgtaaaagtgtaaaagCTCAAAGTGTTATTCTCAAAACAAGCAGAATAAAGTTAAAAGGTTATCacttttattatcaatgtttttatccAGCCTGGTAACTGCTATTGAGTACATGTGTCAGTATTatattcaataattaaaaatgtcgAAAATA

Function

NR:

description
PREDICTED: protein FAM19A2-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU94346 False 1558 lncRNA 0.47 4 13185867 13246130
XM_043246845.1 True 1666 mRNA 0.47 5 13185867 13246125

Neighbor

gene id symbol gene type direction distance location
slc16a1b slc16a1b,LOC107669643,LOC107717534,LOC107591766,LOC107711946,LOC107679710,LOC108425094 coding downstream 121344 13045401 ~ 13064523 (-)
kazna kazna,LOC107669642,LOC107556484,LOC107591771,LOC107711950,LOC107717500,LOC107680131 coding downstream 203645 12948703 ~ 12982222 (-)
tmem51a tmem51a,LOC107717531,LOC107669600,LOC107556479,LOC107679674,LOC107711951,LOC107591770 coding downstream 237276 12942690 ~ 12948591 (-)
sema3b LOC107717529,LOC107556489,LOC107669651,LOC107591772,LOC107711952 coding downstream 266476 12890474 ~ 12919391 (-)
si:dkey-20d21.12 NA coding downstream 379265 12803927 ~ 12806602 (-)
mov10b.2 mov10b.2,LOC107711942,LOC107679724,LOC107591756,LOC107717538 coding upstream 30063 13276193 ~ 13286678 (-)
LOC122350377 LOC107562778,LOC107717538,LOC107669657,LOC107711943,LOC107679735,LOC107591842 coding upstream 40624 13286754 ~ 13298975 (-)
cttnbp2nlb LOC107717506,LOC107669604,LOC107562782,LOC107679769,LOC107711913,LOC107591755 coding upstream 105686 13351816 ~ 13369026 (-)
ddx20 ddx20,LOC107669638,LOC107751451,LOC107594523,LOC107711848,LOC107679786,LOC107556298 coding upstream 279443 13525573 ~ 13531588 (-)
rap1aa rap1aa,rap1a,LOC107594522,LOC107679791,LOC107556321,LOC107751450,LOC101074250 coding upstream 299176 13545306 ~ 13551399 (-)
G63711 NA non-coding downstream 54650 13128190 ~ 13131217 (-)
G63631 LOC107591782,LOC107669630,LOC107711933,LOC107679511 non-coding downstream 385124 12797379 ~ 12800743 (-)
G63610 NA non-coding downstream 437714 12747899 ~ 12748153 (-)
G63588 NA non-coding downstream 513010 12671344 ~ 12672857 (-)
G63585 NA non-coding downstream 515290 12664305 ~ 12670577 (-)
G63735 NA non-coding upstream 15562 13261692 ~ 13274868 (-)
G63745 NA non-coding upstream 86034 13332164 ~ 13332387 (-)
G63751 NA non-coding upstream 101494 13347624 ~ 13350271 (-)
LOC122350567 NA non-coding upstream 373862 13619992 ~ 13682456 (-)
G63866 NA non-coding upstream 442048 13688178 ~ 13693222 (-)
zmynd12 zymnd12,LOC107591768,LOC107711949,LOC107679700 other downstream 102495 12985654 ~ 13083372 (-)
foxp3a foxp3a,si:ch211-167b20.8,LOC107669635,LOC107731227,LOC107550508,LOC107711972,LOC107679368,LOC107591799,LOC107591800 other downstream 681714 12489197 ~ 12504153 (-)
kcnq2a LOC107679259,LOC107668096,LOC107731192,LOC107550457,LOC108442249,LOC108265949,LOC107711924 other downstream 822763 12342160 ~ 12363104 (-)
G63385 NA other downstream 921334 12263694 ~ 12264533 (-)
prok1 prok1,LOC107680267,LOC107711938,LOC107731240 other downstream 1131337 12051357 ~ 12054530 (-)
mc3r mc3r,LOC107751459,LOC107669608,LOC107711834,LOC107680356 other upstream 470498 13716628 ~ 13720514 (-)
G63933 LOC107556304,LOC107751435,LOC107594508 other upstream 563298 13809428 ~ 13863250 (-)
LOC122350784 zgc:162939,LOC107602843,LOC107674500,LOC107724903 other upstream 1139470 14385600 ~ 14455243 (-)
slc20a1a slc20a1a,LOC107724894,LOC107711884,LOC107686402,LOC107667554,LOC107602858,LOC108440301 other upstream 1477582 14723712 ~ 14731391 (-)
G64228 NA other upstream 1533401 14779531 ~ 14781710 (-)

Expression


Co-expression Network