mc3r (mc3r,LOC107751459,LOC107669608,LOC107711834,LOC107680356)


Basic Information

Item Value
gene id mc3r
gene name mc3r,LOC107751459,LOC107669608,LOC107711834,LOC107680356
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 13716628 ~ 13720514 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU94562
GCTGCGACGTATTGAAAATATGTCtagttcatttaatttagttatagtgttttgtttaaagataGTGTCCCGAGCCCTTTTGGTGTGTAAATGCCTCTGTTCAAAGCTGCTGAAGTAGAATCTAACAGTCTATggtaaaacatcaaaaacattgGCGCACTTCCTAggtgactgtctgtctgtctgtctgtctgtctttttgagGTGTcaccaattttgttttttttcatagctGTCAGAATCAAATTCAGCTTGTACTATCTCCAGTTAGCAACGACATTCAGTCAAACTTAGCCCAAAGGCTGCAGTCAGCATGCGTCAATCTTTTAGCTGTCATTCTAAAATTGCTCAGTTTTTGCCTTTCAGTGGTGGAATGTAACTAGGATctcatcatttgtttttttgtcagcagTACAGTTCTACGCAACTGAAATTGCCCtcgttttatttccttttattcagAAGTGGAAAAGATAGAAGTGGACAAGACCAAAAAGATCACAAACCAGGATTTGAACTCAGGTCACCCAAAGCACAACTTCAACC
>XM_043246301.1
CCCAAAATACTGAGGGAGTTAAtagaataattagaaaatatgaaaattgtatttatttttttacatctaaATTTGTatctttaatctttttaaagctttggaaatattttgcattacatcacttgctcaccaatggatcctctgcagtgattTAGTTCAAACAGCTGTTAAATACAAtccacaaataattaaaatgacattttgcgaggcaaaaagctgtgtgtttgttataaACAAATTCTTCATTAAGGCATAACTTTAAACTATAGTTTCTGGCCAAATGAGTCCCTAATCCGTAATGACCTTCATTGGAAAATCTATCCCCTGTTGTCGTCTCACATCAAAGTCCACCCACATGTTTGTTCAGATTTGTTTAGAACCGTTTTCATGTGTAAATGGTGCTTGATTACTCTCCTTATTCAGAATAGATGACTTTTTAAATGGGGAAAACAATATAATGGACTCtcaatatattgtttaataacTCAATATAATGGATATTTCTTCCAGACAAAAGCAACAGTTAAATTGATTCATTTCAAACATGCATGCTTTTGGTTCACAAGAAGTTAGTGGCCTGAGGGTTAGTAAATATCCCATAAATTGGTTTTTGCCATTAACTGCAAAGGTTGTTTTCTGCGTACTATTGTATTTGACTTTGCTCAACACAGAGCAACAGCTAcatactgtttttaatattataagtcaaattaaaataacttttcgtTCTTATTAAGACTCTGCAATTATTTGCCACTCATTAGCACAACGTAGTTAAATATAGCACGTTTTACTACTTAAAGATGCTCCAGGCAGATGTATTTGACCCTTCTGAGGTGCTCAGCACCACATTTTAAGATGCTGtgtcaaagtaaaaaaagtttgcCATGCTTTTCAGGACTCTTTAGACGGACGGTGCTTCAACAGCTTTCGTTAACCATCAACACAACGGTAGTAAGAAGGTTAATGTAAAAaggaaacaataataaaacagataaaCTGAATTAGTAATTTGGATCACAGAAAGCACATAACTGCCCGTTGCCATGAACTATGAATGTGTGTGGCtgagcaaacacacaaagaGCAGGCGGAGGCTGCATCTGCTGACGTACAGCCAGCGGCTGTGAGAGAGAGTCCGTTTGCTCTGAGCCTCTGAATCACACAGCATCTCTACAGAAGCATCTCCAACAACCAGAGAAGCAGCACAGCATTTTTGAAGCCAGCATCTGGGGAACTGCAACATCTGATTCGTGAACTACACCTGCAGCTTTCAGATTCCTTCATTGCTATTCATCCCATCATCTGAATCAGTTTTCTCCTCtttctaatattttttctgcttttaaattttctcttttttttcccatcccTCACCTGTTATCTGTTCTTCCccatttattcatcttaaaaAATCCTGATGAACGACTCATATCTGCAGTTCCTTAAAGGACAGAAACCTGCAAACAGCACATCTTTGCCCGCTAATGGCAGCGGGGTCGATTCTCCAGCGGGGGCGCTGTGTGAGCAGGTTCAGATCCAGGCGGAGGTTTTTCTGACTTTGGGTATTGTGAGTCTTCTGGAGAACATCCTCGTCATCGTAGCCGTGGTTAAAAACAAGAACCTTCACTCTCCGATGTATTTTTTCCTGTGCAGCCTGGCTGCCGCAGACATGTTGGTGAGTGTTTCGAACTCTTTGGAGACCATTGTCATTGCCATACTAAGCAGTCGCCTTCTGGTGGCCAGTGACCATTTTGTGCGTTTGATGGACAATGTGTTTGATTCAATGATCTGTATTTCTCTGGTGGCATCAATCTGCAACCTCTTGGCCATTGCCATCGACCGCTACGTCACGATTTTCTACGCCTTACGCTACCACAGCATAGTGACCGTACGCAGAGCGCTGGTGGCCATCGCTGCCATCTGGTTGGTGTGTGTGGTTTGTGGGATTGTCTTCATAGTGTACTCAGAGAGCAAGACCGTGATTGTCTGTCTGATCACAATGTTCTTTGCCATGCTGTTGCTCATGGCCACTCTCTACGTACACATGTTTCTTCTCGCCAGACTTCACGTTCAGAGAATCGCAGCATTGCCCCCAGCGGCGGCCGCCAACCCGACCCCACGTCAACGCAGCTGTATGAAGGGAGCCGTGACCATCTCCATCCTCCTCGGCGTGTTTGTGTGCTGCTGGGCGCCGTTTTTCCTCCACCTCATTCTGCTGGTGTCCTGTCCGCACCACCCGCTCTGCCTCTGCTACATGTCTCACTTCACCACGTACCTGGTCCTCATTATGTGCAACTCTGTGATTGACCCCCTCATCTACGCCTGCCGCAGCCTGGAAATGAGGAAGACCTTTAAGGAGATACTCTGCTGTTTTGGCTGTCAGCCTCCAGTTTAGACGAATGCCTGATTTGAAAAGAGACAAGAAAAGAAACTTGATGTAAGATGCCAAAGCGTGGTGGCCATAATGAGGGAAGATAAGGACAAAAGCAAACACGcagcatttagaaaaaaaggacTGGAAATTTGTGGAACATTATCAAGGATTTGGAAAGCTCAAAAAAATAAGAGAACTGGGAGGAAGATCGAATGTGACCTGTCACTTGCTGAAAGGGTAGATCGGTTATATGTTAGTCATGTTAATTATGTGTATTCATTACGGAGTGGGGTTTGACAGTCTGAAAATCTAGAATTTCAACTCTCATTAAAACCTTTAAATCAATGAACAGTTTTAGGATTTAAGAAAATTTGGTGAAAGACTGATTAACatgaatgtgaaaatgttgaaatgttgcATAATTTGTAAGTTACCATTCAAACCAGTGAATTTGTGACATTGCTCATTTGACTTTTTCAGAAGCCAAATGAGCAATcaatacctaaaaaaaaaacaagattgttACACCTTTggataatttaaatgtatactgAGTCAGTTCAACGCAAACTTGTGGAGATAATGCAAGCTTAAATATTGAAGCCATTAAAGCAAATAGAGAGCaaaccaaataataaaacagatcattagaaaatcattAATTTTGAAATTTCACTTTTCACTCAAATTATTAGGCttataaaacagattaaaattaaaaaagttttacagtttttaaagtttttacttTTAGACCCCGCAGTAGCTGCGACGTATTGAAAATATGTCtagttcatttaatttagttatagtgttttgtttaaagataGTGTCCCGAGCCCTTTTGGTGTGTAAATGCCTCTGTTCAAAGCTGCTGAAGTAGAATCTAACAGTCTATggtaaaacatcaaaaacattgGCGCACTTCCTAggtgactgtctgtctgtctgtctgtctgtctttttgagGTGTcaccaattttgttttttttcatagctGTCAGAATCAAATTCAGCTTGTACTATCTCCAGTTAGCAACGACATTCAGTCAAACTTAGCCCAAAGGCTGCAGTCAGCATGCGTCAATCTTTTAGCTGTCATTCTAAAATTGCTCAGTTTTTGCCTTTCAGTGGTGGAATGTAACTAGGATctcatcatttgtttttttgtcagcagTACAGTTCTACGCAACTGAAATTGCCCtcgttttatttccttttattcagAAGTGGAAAAGATAGAAGTGGACAAGACCAAAAAGATCACAAACCAGGATTTGAACTCAGGTCACCCAAAGCACAACTTCAACCTGTTGTCTCTGACTATCCCTCTTATTCCCTTAAACAGCAACATAGTCTATCTTTTTGCTTGTCTAGAGGTTTAGGTTTGATACTCTGCTTGTTTTGCTGACCTGTTTTTCAAACTGTACTTGCAATCTGTGAACGCTATTATTGCATGAGCTTTAGCACGTGACTTATATCTGTGGACACAATCTCCagcaaatatcta

Function

symbol description
mc3r Predicted to enable melanocyte-stimulating hormone receptor activity and peptide hormone binding activity. Predicted to be involved in adenylate cyclase-activating G protein-coupled receptor signaling pathway and regulation of metabolic process. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in cytoplasm and plasma membrane. Is expressed in brain and epiphysis. Human ortholog(s) of this gene implicated in obesity. Orthologous to human MC3R (melanocortin 3 receptor).

NR:

description
PREDICTED: melanocortin receptor 3-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004977 melanocortin receptor activity molecular_function

KEGG:

id description
K04201 MC3R; melanocortin 3 receptor

RNA

RNA id representative length rna type GC content exon number start site end site
TU94562 False 546 lncRNA 0.39 1 13716827 13717372
XM_043246301.1 True 3887 mRNA 0.40 1 13716628 13720514

Neighbor

gene id symbol gene type direction distance location
cebpb cebpb,LOC107556312,LOC107669676,LOC107751442,LOC107594515,LOC107679873,LOC107711812 coding downstream 75146 13639945 ~ 13641482 (-)
adipor1b adipor1b,LOC107751445,LOC107679819,LOC107594512,LOC107711855 coding downstream 101290 13608854 ~ 13615338 (-)
LOC122351021 klhl12,LOC107679803,LOC107556315,LOC107711853,LOC107751446,LOC107594517 coding downstream 108351 13599250 ~ 13608277 (-)
tuba5 tuba8l,LOC108265838,LOC108425079,LOC107679810,LOC107711852,LOC107594520,LOC103031418 coding downstream 118781 13593701 ~ 13597847 (-)
kdm5bb LOC107751449,LOC107556320,LOC107711851 coding downstream 125452 13571079 ~ 13591176 (-)
LOC122350319 LOC107574771,LOC107751454,LOC107669655 coding upstream 452540 14173054 ~ 14175823 (-)
LOC122350320 prf1.5,LOC107751453,LOC107574770,LOC107594505,LOC107711865,LOC107679935 coding upstream 461018 14181532 ~ 14186141 (-)
mpeg1.1 mpeg1.1,LOC107724877,LOC107669601,LOC107602834,LOC107679909,LOC107724864,LOC107751428,LOC107602817 coding upstream 466915 14187429 ~ 14190244 (-)
LOC122349900 LOC107724883,LOC107580262,LOC107669607 coding upstream 473319 14193833 ~ 14194501 (-)
slc20a2 slc20a2,LOC107724891,LOC107669617,LOC107602837,LOC107594502,LOC107711867 coding upstream 504842 14225356 ~ 14259044 (-)
G63868 NA non-coding downstream 4227 13711155 ~ 13712401 (-)
G63867 NA non-coding downstream 16560 13699657 ~ 13700068 (-)
G63866 NA non-coding downstream 23406 13688178 ~ 13693222 (-)
LOC122350567 NA non-coding downstream 34172 13619992 ~ 13682456 (-)
G63751 NA non-coding downstream 366357 13347624 ~ 13350271 (-)
G63873 NA non-coding upstream 3217 13723731 ~ 13724000 (-)
G63874 NA non-coding upstream 4555 13725069 ~ 13725474 (-)
G63941 grid2,LOC107711862,LOC107669587,LOC107568412,LOC107594506 non-coding upstream 277168 13997682 ~ 13997966 (-)
G63942 NA non-coding upstream 286299 14006813 ~ 14007018 (-)
G63944 NA non-coding upstream 341983 14062497 ~ 14062740 (-)
tafa3b si:ch211-254n4.3,fam19a3,LOC107711931,LOC107591764,LOC107562776,LOC107669582,LOC102289964,LOC104918365,LOC106582736,LOC105921069,LOC106517667,LOC108231490,LOC106937909 other downstream 470498 13185867 ~ 13246130 (-)
zmynd12 zymnd12,LOC107591768,LOC107711949,LOC107679700 other downstream 633256 12985654 ~ 13083372 (-)
foxp3a foxp3a,si:ch211-167b20.8,LOC107669635,LOC107731227,LOC107550508,LOC107711972,LOC107679368,LOC107591799,LOC107591800 other downstream 1212475 12489197 ~ 12504153 (-)
kcnq2a LOC107679259,LOC107668096,LOC107731192,LOC107550457,LOC108442249,LOC108265949,LOC107711924 other downstream 1353524 12342160 ~ 12363104 (-)
G63385 NA other downstream 1452095 12263694 ~ 12264533 (-)
G63933 LOC107556304,LOC107751435,LOC107594508 other upstream 88914 13809428 ~ 13863250 (-)
LOC122350784 zgc:162939,LOC107602843,LOC107674500,LOC107724903 other upstream 665086 14385600 ~ 14455243 (-)
slc20a1a slc20a1a,LOC107724894,LOC107711884,LOC107686402,LOC107667554,LOC107602858,LOC108440301 other upstream 1003198 14723712 ~ 14731391 (-)
G64228 NA other upstream 1059017 14779531 ~ 14781710 (-)
G64353 hmcn2,LOC107723245,LOC107659581,LOC107570300 other upstream 1563347 15283861 ~ 15284130 (-)

Expression


Co-expression Network