G64481


Basic Information

Item Value
gene id G64481
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 16131611 ~ 16132812 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU95376
GGACCATGATGGAGGAGAGAGATCCAGCTGGGGCTTATTCCACAGGACCCACCTCCTCTCCCAGCAAGGATTCACTCAAAGGAGAGTCTGAGGACAGGAAGGACAGTGATGATGAGAAGTCTGATAGGAACAGACCCTGGTGGAAGAAGCGTTTTGTTCCTGCCATTCCTAAAGGTGAGGAACCCAACACTTACTCCCTGACTGTTTTGTAATAAGTACATGTCTGCCTTTTATCCTATGGATGGTGGTCAATGGCTAGAAAATATGGAAATAGTTAGCATAGATGAATGCGTCAATGGGAGAAAAGTGCTGATAATATTGGCTTTGATTTTTGGTCCAAATGGAATGATGGcaataaaattttaaactttaatattaagCTAATACTGATATATCCACTGCTCTAATGTTTGTGCTTACAACTAAGACTTCTTTAAATGTGCAAAGCTTTAAATGTGTACTCAGATTATTGCATTTGTGAATGTGAGTCTGTGTTTCTAATTGGAGAAGAAATTGGATaagaaaatattcattttaaaaattaattgttctCGGCTGTTCTTCTCTTTTAGATGTTTgacttttaaacacaaaagctgTGTTTTGCATGAACTTGTCTTGTATGTTAAATGTTTCAG

Function

GO:

id name namespace
GO:0032400 melanosome localization biological_process
GO:0051875 pigment granule localization biological_process
GO:0051648 vesicle localization biological_process

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction
ko04727 GABAergic synapse
ko04723 Retrograde endocannabinoid signaling
ko05032 Morphine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
TU95376 True 638 lncRNA 0.38 2 16131611 16132812

Neighbor

gene id symbol gene type direction distance location
LOC122351126 pbx3b,pbx3,LOC107550583,LOC107669256,LOC108434408,LOC107555108 coding downstream 139353 15967500 ~ 15992258 (-)
pbx3b pbx3b,pbx3,LOC107550583,LOC107669256,LOC107555108,LOC108434408 coding downstream 182828 15833965 ~ 15948783 (-)
LOC122350591 lmx1b,lmx1bb,LOC107550585,LOC107723253,LOC107564042,LOC107753135,LOC108434405 coding downstream 483289 15578108 ~ 15648322 (-)
lmx1bb lmx1bb,lmx1b,LOC107550585,LOC107723253,LOC107753135,LOC107564042 coding downstream 622416 15496493 ~ 15509195 (-)
LOC122350755 zbtb34,LOC107723248,LOC107550586,LOC107727329,LOC107564041,LOC107727326 coding downstream 724441 15393349 ~ 15407170 (-)
LOC122350711 LOC107550583,LOC107555108,LOC107669256 coding upstream 58275 16191087 ~ 16192344 (-)
LOC122350700 LOC107550582,LOC107723237 coding upstream 180692 16313504 ~ 16344494 (-)
setd1bb LOC107659604,LOC107550568,LOC107753154,LOC107669245,LOC107555095 coding upstream 221096 16353908 ~ 16363944 (-)
LOC122350716 LOC107550565,LOC107659586,LOC107723226,LOC107723224,LOC107550564 coding upstream 265764 16398576 ~ 16407398 (-)
LOC122350717 rimbp2,LOC107684511,LOC107753130,LOC108247306,LOC107081823 coding upstream 630485 16763297 ~ 16835560 (-)
LOC122351008 NA non-coding downstream 37051 16079362 ~ 16094560 (-)
G64476 gapvd1,LOC107669250,LOC107753155,LOC107555093,LOC107723237,LOC107550582 non-coding downstream 67858 16062879 ~ 16063753 (-)
LOC122351100 NA non-coding downstream 349724 15767668 ~ 15781887 (-)
G64409 NA non-coding downstream 479752 15651636 ~ 15651859 (-)
G64359 hmcn2,LOC107570300,LOC107723245,LOC107659581 non-coding downstream 835390 15295350 ~ 15296221 (-)
LOC122350933 NA non-coding upstream 128725 16261537 ~ 16283392 (-)
G64502 LOC107723241,LOC107659605,LOC107550566 non-coding upstream 240509 16373321 ~ 16376597 (-)
G64503 LOC107723244 non-coding upstream 244302 16377114 ~ 16377369 (-)
G64508 NA non-coding upstream 247049 16379861 ~ 16384905 (-)
G64531 NA non-coding upstream 327145 16459957 ~ 16460330 (-)
mvb12bb mvb12b,LOC107550570,LOC107753158,LOC107723228 other downstream 430715 15649226 ~ 15700896 (-)
G64353 hmcn2,LOC107723245,LOC107659581,LOC107570300 other downstream 847481 15283861 ~ 15284130 (-)
G64228 NA other downstream 1349901 14779531 ~ 14781710 (-)
slc20a1a slc20a1a,LOC107724894,LOC107711884,LOC107686402,LOC107667554,LOC107602858,LOC108440301 other downstream 1400220 14723712 ~ 14731391 (-)
LOC122350784 zgc:162939,LOC107602843,LOC107674500,LOC107724903 other downstream 1676368 14385600 ~ 14455243 (-)
LOC122350093 NA other upstream 275022 16407834 ~ 16409696 (-)
LOC122350945 drd2b,LOC107745132,LOC107705176,LOC107691748,LOC107664308,LOC107600777,LOC107556418,LOC108428674 other upstream 913655 17046467 ~ 17096795 (-)
LOC122350953 NA other upstream 1187564 17320376 ~ 17401228 (-)
zgc:194007 NA other upstream 1226573 17359385 ~ 17361850 (-)
kcnip3a kcnip3a,LOC108440810,LOC107684506,LOC107553838,LOC107566017,LOC102307840,LOC108264878,LOC101482209,LOC103397788,LOC107753121,LOC107687962,LOC102210345,LOC108233759,LOC102228939,LOC102799407,LOC104951840,LOC102798027 other upstream 1468446 17601258 ~ 17645511 (-)

Expression


Co-expression Network