LOC122350093


Basic Information

Item Value
gene id LOC122350093
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 16407834 ~ 16409696 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU95424
GGCTCTGGACTCAGAATGGTTTGCGGGTGTTTTTTGGCTCGGGGTAAGATTTTGACAGGTTTGCACTGGTTCCCCCGAGATGCTGACAGAGCTAGATTGTGGCTGCAGGCGGTGGCTCGGCCATCAGCTCCTGACACATCGACAATGTTTGTGTGTAACAAACTTCTTTCACAAGAGAGCTTTTGCAAACATAAGGACGTTGGCATTGCTCACGGGAGTAATCTCAGACGAGAAGACGCTGAACGAAGTCCCACATATCTTTCCATTCCTACAGGGCAGCCAtttcacTTGAGCTGCTGGCTGGAAATACTGGAGTTTTGCCCAGTGACCGCAGATGAAGGAGGAAGTCTAAATATGGTCATTGGTGAGATGAATATATCGTGACATCACAAAACAAGCAGCAGCAACGCTTCCCGCTTCTTCACACAGTCACATTAGAAATGGCTGTTCGGAGCAAATGCTATTATAATTGAAGTTACAGATAAGTTAAGActataattgtaaaattgtaattgttaaataaaggttATTAGAACATGATACATATGTTAACCTATGTAATCGTCTTGTGTTCAGAATCTGGATGAGGCCTTAATAAAGTTATTCTTGTTTTTGAACTGTCAGCTCTCCCATCATATTTAGGAATgtgcatataatattttaacctATAATAGATTGAACTTTAAtatgatgttatgcacagtcTTTGAAACTGAAAGACCTGCCAACAGAACGAGTTGCTAGcacaaactgaaaatataagccaccataatgcattttttttttctcttttttgctttcttGTACTGAGAAACAACAGTTCCGtgattttgaatgtattttttatgtttttatgttttatataagcTGTAAGGGTAGCTTGTCTggcatttttcatgtttatatcTTAACTGTTAACatcaattttattacaaataagcatattttttaataaaatagatttagatTGTTAGACATTGATGGGGTTTTGTTTAGGGGTGGGCTTAAGTAAGAATTGAGAGATATGGTCCTTCTGTTTAGAGCAGACCCaggaaagctttaaaaaaatgtttgaaagttTGTTTTTAGACCACTATATAAGCACTATATGGTGCTGCTAAAACCATAAgcaacattaaaatgcaaaggGTTGTCTGTCTTTGCATTATTCCAGTGCCTcagatatttgaaataataaaaactgttgcaaaaattgtaaaaaaaaatataactgaaCATTAAATATTGCAGTTAATATCAAATCTGGCATTTAtagagttttattaaaatgtacctATTCCCACAACTGGTGCAGAAATattttgagttgatttattGCATTGCAGATTCTTGATGTGTGACAAAATCATGTCTTCATATCTGTGTGTTAGAGCAAAAAGTTTTACTGTGTAGGctataatcataaaaatgctgTACTATAGGACTAATTAttatatacactgtaaatactttatatttatttttatttattcaacataTCCATCCGAATTCCTTTGCATTATTTCTATATTGCACATCTACACATCCAATATTGTGTATTGTTTTCACTTGTTTgtcataataaaaatctttccCATCTGTGCACAGGTAAATTCCTCATGTGTAGAAGCACACTTGGCAATTAAACGCTTTCTGATTTTGATTGTTATTGTGCATAATCTGTTTTTC
>XR_006251563.1
CCTTTCTCTATTAAAAACGTCGGTGCCAGGCTGGCTCTGGACTCAGAATGGTTTGCGGGTGTTTTTTGGCTCGGGGTAAGATTTTGACAGGTTTGCACTGGTTCCCCCGAGATGCTGACAGAGCTAGATTGTGGCTGCAGGCGGTGGCTCGGCCATCAGCTCCTGACACATCGACAATGTTTGTGTGTAACAAACTTCTTTCACAAGAGAGCTTTTGCAAACATAAGGACGTTGGCATTGCTCACGGGAGTAATCTCAGACGAGAAGACGCTGAACGAAGTCCCACATATCTTTCCATTCCTACAGGGCAGCCAtttcacTTGAGCTGCTGGCTGGAAATACTGGAGTTTTGCCCAGTGACCGCAGATGAAGGAGGAAGTCTAAATATGGTCATTGGTGAGATGAATATATCGTGACATCACAAAACAAGCAGCAGCAACGCTTCCCGCTTCTTCACACAGTCACATTAGAAATGGCTGTTCGGAGCAAATGCTATTATAATTGAAGTTACAGATAAGTTAAGActataattgtaaaattgtaattgttaaataaaggttATTAGAACATGATACATATGTTAACCTATGTAATCGTCTTGTGTTCAGAATCTGGATGAGGCCTTAATAAAGTTATTCTTGTTTTTGAACTGTCAGCTCTCCCATCATATTTAGGAATgtgcatataatattttaacctATAATAGATTGAACTTTAAtatgatgttatgcacagtcTTTGAAACTGAAAGACCTGCCAACAGAACGAGTTGCTAGcacaaactgaaaatataagccaccataatgcattttttttttctcttttttgctttcttGTACTGAGAAACAACAGTTCCGtgattttgaatgtattttttatgtttttatgttttatataagcTGTAAGGGTAGCTTGTCTggcatttttcatgtttatatcTTAACTGTTAACatcaattttattacaaataagcatattttttaataaaatagatttagatTGTTAGACATTGATGGGGTTTTGTTTAGGGGTGGGCTTAAGTAAGAATTGAGAGATATGGTCCTTCTGTTTAGAGCAGACCCaggaaagctttaaaaaaatgtttgaaagttTGTTTTTAGACCACTATATAAGCACTATATGGTGCTGCTAAAACCATAAgcaacattaaaatgcaaaggGTTGTCTGTCTTTGCATTATTCCAGTGCCTcagatatttgaaataataaaaactgttgcaaaaattgtaaaaaaaaatataactgaaCATTAAATATTGCAGTTAATATCAAATCTGGCATTTAtagagttttattaaaatgtacctATTCCCACAACTGGTGCAGAAATattttgagttgatttattGCATTGCAGATTCTTGATGTGTGACAAAATCATGTCTTCATATCTGTGTGTTAGAGCAAAAAGTTTTACTGTGTAGGctataatcataaaaatgctgTACTATAGGACTAATTAttatatacactgtaaatactttatatttatttttatttattcaacataTCCATCCGAATTCCTTTGCATTATTTCTATATTGCACATCTACACATCCAATATTGTGTATTGTTTTCACTTGTTTgtcataataaaaatctttccCATCTGTGCACAGGTAAATTCCTCATGTGTAGAAGCACACTTGGCAATTAAACGCTTTCTGATTTTGATTGTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU95424 False 1689 TUCP 0.35 2 16407834 16409664
XR_006251563.1 True 1701 lncRNA 0.35 2 16407854 16409696

Neighbor

gene id symbol gene type direction distance location
LOC122350716 LOC107550565,LOC107659586,LOC107723226,LOC107723224,LOC107550564 coding downstream 436 16398576 ~ 16407398 (-)
setd1bb LOC107659604,LOC107550568,LOC107753154,LOC107669245,LOC107555095 coding downstream 43890 16353908 ~ 16363944 (-)
LOC122350700 LOC107550582,LOC107723237 coding downstream 63340 16313504 ~ 16344494 (-)
LOC122350711 LOC107550583,LOC107555108,LOC107669256 coding downstream 215490 16191087 ~ 16192344 (-)
LOC122351126 pbx3b,pbx3,LOC107550583,LOC107669256,LOC108434408,LOC107555108 coding downstream 415576 15967500 ~ 15992258 (-)
LOC122350717 rimbp2,LOC107684511,LOC107753130,LOC108247306,LOC107081823 coding upstream 353601 16763297 ~ 16835560 (-)
rflna LOC107687957,LOC107553832,LOC107684501,LOC107576363 coding upstream 1046446 17456142 ~ 17464579 (-)
prnpa LOC107736233 coding upstream 1131130 17540826 ~ 17543078 (-)
rassf2a rassf2a,LOC107687959,LOC107553834,LOC107742747 coding upstream 1142824 17552520 ~ 17567609 (-)
slc23a2 slc23a2,LOC107753122,LOC107687958,LOC107684505 coding upstream 1159724 17569420 ~ 17597847 (-)
G64508 NA non-coding downstream 22929 16379861 ~ 16384905 (-)
G64503 LOC107723244 non-coding downstream 30465 16377114 ~ 16377369 (-)
G64502 LOC107723241,LOC107659605,LOC107550566 non-coding downstream 31237 16373321 ~ 16376597 (-)
LOC122350933 NA non-coding downstream 124442 16261537 ~ 16283392 (-)
G64481 NA non-coding downstream 275022 16131611 ~ 16132812 (-)
G64531 NA non-coding upstream 50261 16459957 ~ 16460330 (-)
G64556 NA non-coding upstream 148372 16558068 ~ 16661411 (-)
G64582 NA non-coding upstream 241862 16651558 ~ 16690514 (-)
G64599 NA non-coding upstream 273541 16683237 ~ 16683803 (-)
G64634 NA non-coding upstream 634758 17044454 ~ 17044971 (-)
mvb12bb mvb12b,LOC107550570,LOC107753158,LOC107723228 other downstream 706938 15649226 ~ 15700896 (-)
G64353 hmcn2,LOC107723245,LOC107659581,LOC107570300 other downstream 1123704 15283861 ~ 15284130 (-)
G64228 NA other downstream 1626124 14779531 ~ 14781710 (-)
slc20a1a slc20a1a,LOC107724894,LOC107711884,LOC107686402,LOC107667554,LOC107602858,LOC108440301 other downstream 1676443 14723712 ~ 14731391 (-)
LOC122350784 zgc:162939,LOC107602843,LOC107674500,LOC107724903 other downstream 1952591 14385600 ~ 14455243 (-)
LOC122350945 drd2b,LOC107745132,LOC107705176,LOC107691748,LOC107664308,LOC107600777,LOC107556418,LOC108428674 other upstream 636771 17046467 ~ 17096795 (-)
LOC122350953 NA other upstream 910680 17320376 ~ 17401228 (-)
zgc:194007 NA other upstream 949689 17359385 ~ 17361850 (-)
kcnip3a kcnip3a,LOC108440810,LOC107684506,LOC107553838,LOC107566017,LOC102307840,LOC108264878,LOC101482209,LOC103397788,LOC107753121,LOC107687962,LOC102210345,LOC108233759,LOC102228939,LOC102799407,LOC104951840,LOC102798027 other upstream 1191562 17601258 ~ 17645511 (-)
LOC122350290 LOC107569538,LOC107747839,LOC107554410,LOC107703160,LOC107694233 other upstream 1697757 18107453 ~ 18112701 (-)

Expression


Co-expression Network