G30120


Basic Information

Item Value
gene id G30120
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 9297256 ~ 9297656 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU34094
CAAAAACACAACATTTTTGTGTGTGTCCCTTTAAATGCAAATGAGCTGCTGCTCCTGGCCCCCTTTCCAGAAGAGGGCGGAGATTTAACAGCTTGCAATTCGGTAGCTCAACAACAAAACTGGAGAATCTCACGCAGCCAAAGTGACGATTGTCAATAACGGTGTTCAGCCTTACATTGTTCAAACCGGAGTCGGACACTGATGGAGAGACTCAGGAAGAAGTTACAACTTTTAGAATGCAACTGGACATTTCTGAATGGTTAGTGGATAAATGTATGTAGATGCCGTGAAGTTGATTCAACTCATCGACTAGCATGTGCCATCATGTTAATCTTTTGTGCATGTTTTTTTTTTCTTAGGCACATTTATAAAAATGTCCTACTTTAACTAACTAATTTAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU34094 True 401 lncRNA 0.40 1 9297256 9297656

Neighbor

gene id symbol gene type direction distance location
CI01000004_09224465_09224950 NA coding upstream 72300 9222479 ~ 9224956 (+)
CI01000004_09185502_09218621 NA coding upstream 78614 9184835 ~ 9218642 (+)
CI01000004_09173580_09175411 NA coding upstream 121599 9171752 ~ 9175657 (+)
CI01000004_09002274_09004879 IMPA1, IMPA1.3 coding upstream 292233 9002042 ~ 9005023 (+)
CI01000004_08996083_08997863 NA coding upstream 299393 8996083 ~ 8997863 (+)
CI01000004_09340611_09363638 TESK2 coding downstream 41884 9339540 ~ 9364254 (+)
CI01000004_09371639_09375356 NA coding downstream 73983 9371639 ~ 9376005 (+)
CI01000004_09378220_09381425 NA coding downstream 80148 9377804 ~ 9381823 (+)
CI01000004_09383327_09385444 ELOVL8A coding downstream 85671 9383327 ~ 9385494 (+)
CI01000004_09429758_09474615 ZSWIM5 coding downstream 132102 9429758 ~ 9474615 (+)
G28980 NA non-coding upstream 85642 9209107 ~ 9211614 (+)
G29010 NA non-coding upstream 255010 9041084 ~ 9042246 (+)
G28999 NA non-coding upstream 273004 9024052 ~ 9024252 (+)
G28994 NA non-coding upstream 276195 9017805 ~ 9021061 (+)
G28992 NA non-coding upstream 313553 8983490 ~ 8983703 (+)
G30129 NA non-coding downstream 10504 9308160 ~ 9309854 (+)
G30130 NA non-coding downstream 12703 9310359 ~ 9310561 (+)
G30131 NA non-coding downstream 12941 9310597 ~ 9310821 (+)
G30111 NA non-coding downstream 25902 9323558 ~ 9326704 (+)
G30163 NA non-coding downstream 114573 9412229 ~ 9412561 (+)
CI01000004_08976512_08980033 TTPA other upstream 316272 8976254 ~ 8980984 (+)
G28859 NA other upstream 697653 8599235 ~ 8599603 (+)
CI01000004_08414451_08436256 NA other upstream 846029 8414316 ~ 8439933 (+)
CI01000004_07654234_07655677 MRPL34 other upstream 1640873 7654234 ~ 7656383 (+)
CI01000004_06571261_06572539 SEP15 other upstream 2722835 6570771 ~ 6572667 (+)
G30797 NA other downstream 1199720 10497376 ~ 10497788 (+)
G31710 NA other downstream 2339595 11637251 ~ 11642400 (+)
CI01000004_11666900_11667179 NA other downstream 2367117 11666900 ~ 11667659 (+)
G31865 NA other downstream 2894474 12192130 ~ 12197418 (+)
CI01000004_12646972_12652534 NA other downstream 3345098 12646838 ~ 12652570 (+)

Expression


Co-expression Network