LOC122350298 (pla2g1b,LOC107703141,LOC107753147,LOC107554411,LOC107554412,LOC107550943)


Basic Information

Item Value
gene id LOC122350298
gene name pla2g1b,LOC107703141,LOC107753147,LOC107554411,LOC107554412,LOC107550943
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 18071485 ~ 18080569 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU95840
CAtatacaacacacaaacacactttaatCGCACAAAACCGCAACAATCACAGCAACTTTCATTTTGTGCACGCACATTTATTAGCAAGTTAGCTTATCAATGTTCACTTACCATCAAGGTTATATAAATAAGTTATAGAGCTATAAATAAATGGCTACTAACACTCGTACACTTGTAATCTTCACCATGAACACCTTCCTGTCTGTTGTGATCCTGAGCGTGAGTCTGTCCGCCCgggAACCTCCTGAAGTTGGGTCTCCACGAGTCAACAGGCCTTAACTACGTGCTCAGTCCACTGTACCATTCATTTCTACAGCTATTAACTCATATTAATGAGTGTGAAATCTGCCAAATATGCAAGACCAGCAGTAagtaaatacacatgcataatgGTGTTATTTGTTGTGATTTGGATgatttgaaaaagcttttgtgTGCTGAGGGCTGTTTGTACTTAAGAGTTTTGCAACTTTTTCCAAGccttatgcttttttttttttttttttttttttttttttttttttggagaaaaatgAGTTCCTCTTGTACCAGCTGTGCAAATGGCAAACATATGCTGACTTTCCCAaagatctcacacacacacacacacacacacacacgtagacacagtacataaacacacacagctttgtTACAAAATTGTAACAGTATCTGTACATTTGGgcacttgtgtgtgtgcatgtgcattaaCATATCTTACGTGCATAATTCACACTTATCAATGTGCTCCGCCCATCAAGGTTATTTAAATAAGTTATAGAGCTATAAATAAATGGCTACTAACACTCGTACCCTTGTAATCTTCACCATGAACACCTTCCTGTCTGTTGTGATCCTGAGCGTGAGTCTGCCCACCTTGCTGGCAACTCTAGACTACAGAGCGCTGTGGCAGTTCAGGGCTATGATCCTCTGTACCATCCCTGATAGCTGGCCTTTACTGGATTACGCAGACTACGGATGTTATTGTGGAAAAGGAGGCTCCGGCACCCCTGTGGATGAACTGGACAGGTCAGATATAAACCAGATATAGAGACACTGAACCGTCAGTCAAAATTTCAAGCTGAGAGGTTTAGTGCAtagtatataaatgaaaagttcttctaaaatgacaaacaacacTTAGTGATAACTAACAATAACTGAACATAAACTTAGGAACCtgataaaactgaaaattattaaaaaaaacggcAAACTTTGAATTCATGTCCACTGTATTCTCGATCTCTGTAGGTGCTGTGAAGTGCATGATCAGTGTTATTCTGACTCATGGCAGCATGATGACTGCTGGGGTATCTTAGACAACCCCTACACTGAAGTCTACTCATTCTCATGTGACAAAGCAGCTAGGAAAATCACCTGCAGTGctGACAAAAATCGTCCCTGTGAGATGTTCATCTGTGAATGTGACAGGAAAGCAGCTGAATGCTTTGCACAGGCGGGTTACAACCCAGAACACGAGCACTATCCCAGTGAAAACtgcaaatgaactgaaactccATTAAAGCTTAGGATTGTCCCCAAAGTCTTATTAAAGATAGCAATGGAATAGCatcaaaagttaatttttttgcttatgCCAATTGATATTTAATTCATAGCAGACACATTCTTTGATCTtatatgttaatttattcatgcaattaaagtattactttttaaaaattattagtcttttttttccagtaaacaTAGTTATATATGTAGTGTTAGATACTAAGACTTCGGAGAATACAGTTTCTTGTGATAGAATTCATACACCataatgtgaaagaaaaaaaaactgttttaacatctttgcaaatacattgaaaaaaaaaacctattctattgcaaaagtattcatacccatATCAACTACACTTTGAGTGGCACATTTAATCGAATAGTTATGTTTTGAGGTAGTAAAAAAACTGCCTGTAGAGCTCAGAAACAGGATTGCATTAAGccacacatatttaaaacaaccaGGACTCTTCCTAGATCTAGCCTCCTGGCCAAACTGAGCAATTGAGAGAGAAGGGCTTTGTCTAGACTGGTGACCAAGAACCTGATGGTCACTTTTGTTGAGCTTCATGATCATATTTGGAGAAATCTACAGAAGAACAAACATCACTGATTTGAGCTTTATGGCAGTGAGTTTGTGGCAAAAGTCAATCCTCTGCTCAGCGAAGACATGGAATGTGCAAAAAGAGCACTTAAAGGACCCTCAGACTGGGAGAAACAAGATTCTCTGGTCCGATGAACCTCAATTCCAAGCATCATATATGAAGGAAACGTGAAAAGTAAATTGGGCTGTTAGCAGCCTTATGCTGTGGAGCTGTTAGTGGAAAGGACTGAGGGACTTGTTAGAGTCGAAGAAAAGCTCAATGAACCAAAATACTGAGATAATGAAAACCCTTTCAAAAACTTTAATGAAAAACCAGTCCAGAGCATTTAGAACCTCAGACTGGGCAGAAGGTTAACcttccaacaagacaatgaccTTAAGCACACAGCAAGAGTGGCTTATAAAGTACTCTGTCAATGTCCTGGAGTGGCTCGGCCAGATCCTGGGACTGaacccaatcaaatatttctagAGAAACTTGAAAATGTGCATCTGCCCCaatccaacctgacagagcttgTGAGGTGAAGAGGAGAGAAGAGCAAAGCTTGTCACTTCATAACCAAAAAGACTTGAGACTTTAAAGCTGCTTCAGCTAAGTGCTAATTTAAGGGTATGAATAGTTATGCAatgtacttttttcattttatttcattttttttaaagaatttacaAAGTAGACAgttgtgtttgtgcttttgcaTTATGGTGTAATtgaaagcagtttaacataaggcaGGAACataacaaaccattaaaaaatgtatatcttatttcatttttaaaatgtattttcttccaATCGGTGGTTTGCGCTTAAAACAAGATGtgcatggtttaaaaaaaatgtatgcaattacTGAAACAGAATCATAATATAACttctaataaattaaacaaacatacttaaagtatttaatttaaacatactTAAATTGTTGTAATCCTGCAGGAAAACCAGTCATTCACATTAGTTTTTTAGATGAAAGACACATTACCTTGAAGTGATGAAGTGATATTTGTTTTTCCCCACTAGTGAATTGTTTAAGCATAAAATGTTCTGCTGtttaaatttagaaaaagaaaaaaaaccaccaACAACATCAATTCAGCTTCCAATTCATACATTCGTTCAATACACACATCTAAAGTTTGGttctcaaataaatatatcttgttttaaggatgttcagatatttttactggaaaaaaaggGACCAAAGAAATGATTTTTGCAATGTTGGAAGTTAGTTGATGTTTGTCAGTGGCTCTTGGGTTTGCCCTCACAGATGTAAGGGTAAGGAAGGGTACAGTCTGCATCATTCCACAGCCTCCGTCCTTCCACAGTTATCCGGGCATGAAGCTGCCCACAATCTTCACCGTTCACTCTGACATCCCAGTCATCTGGTTGACCCATGTCCCAGTGGCTAAAACAGACATCAGCAGTTACTTCGTGCTTTTGGAGTTGTACCCCATTGACCTCCTCTCACTATTTCATCAGTTCTTACTGTTCAGTAGCACTAAAGTCCGTTCCATCTACCCAGGTCCACTGTCCCTCTTCTTTCTCAACAAGCCCGATCCAGTAGCTATCAGACAACTTCACGAATGAAGACAGGAAGTCCTGGTTCCAAAAAGAAGCCAAACGTCAAACCTCTAATAAAACTCCCACAAATGATTGTAATGCTACGCGTTCTTGACTTACAATCTCAGCCAGGTTATTGGCAACCACTAAATGCGATCCTTTCTCTACGCAGTTTTTCTCAGCAGTTTGCCAGTTCTTCttcactgaagactgaaaataGCATGAGTCTTCATAAAACACCCAGCCTTCCTGACAGGGACCTGTACGAAAAACACTTAGTCAAACTGCATCTTAACTCTGGCAGGTTTCCAAGTCcaatataaacattttgcaaaGGATAAAGATCAGGAAACACAATGGGGTCCGAATCTGGGATTCATAATCACCTTGCACCGCCATCACACGTTCAGAGAAATGAGCATTTTCTGAGAGAAATAGATGGttacatgaaaaacaaacgTGAAgacaaatttataatatattgttagtatcatttaaatatgGATATAACTATGCAAAAGTGTAATTTTACAAAGACAGAAAAAGCGATATTTACCAAATGTTTCGGAGGACTTCAGCAAAACTCTCAGATCGGCGACATCTCGGCTGACCTGAGAGACTTTGaagaattataattaaaatcaatCTCTGGTGAAAAATCCCATAGAGTGGGATCCGACAAGTTGTGCAAATTAGTGGGTGGAAGAAAAATGCTGACAACATACTTTTAATTCCTAGAGCCAGAGTGAGTATAAACACATAGAGGATGAGAACTCCATATAGAATGTacatctttcttttctgtctacctgtaggaaagaaaaaaagttgaaatgtaAGAATAAGGAACAGAGACAGAAATTAAATTTCGAATCGTCAGAGAGTGTCAGCATGTGATTTACTGTGGTGTCTTTACCACCTTATCTGGTCACTAGTCTTTCTTAGcaagtaatataaaatgaatgaaaaaacatatttctcacctgattgatatatacatttttggccAGCCTGATTAATTTCTGCCTCAATTGTGCTAAACCGGTCATATGATACCGTTTCCATGTCTGAGGAACAAAGCAgaatttcatttacatttatatatgtatatatatatatatatatatatatatacatatatatatatagattttgtCCCAACATTGAAATATTGAGGTATAAATAACGGGACTGAATGTACTAAGGCAAGGTTTCAAGGTCATGCAACAAACAGTTGAATATTAACCTGTAGACTGACAAACTATGTCTGAACTTCATCCATCACAAACACGAAGAGTAtatgaaaataacaaacacacaacagaaCGACAGGACTTGGTGTATATAGCAGAGTTTTATTAACCCACATAAAATActgtcaaaacacaaaaacatatctAAATGACACCAAATGTGTTTTGGCAAGACCGTTAAGCTGTAAATGTTATTAGCAAATCAAAGTAGGAATTGCTATGAAggacaatacattaaaatgttttcatgaaaaaaaaaatccataacaaaagaaaaaaagcagctaACTGTCAAGTGCAATGAATCTTACTGTTAAAAGTGACTGTTTCAGTGGGCTTCCTCTCCTCGGTTGCGGTCAGTGTCCTGATGGCTGTTCTCTGTGATTCTGTCCTTACGCAATGGCTCCTAACCATTTCTGAGGCCGGAACTGACAGTCCCAATATCCTATTGGTCTTTTTGTAACGCTTGTGTCTCACGTGTGTGCGAAATATCACAAAACGAATTATCgtaattcattcattatctGTTTCTTTGTCTGCTTGTTATACTAGGTGTTTAGATcgtaataaattatttgaatacaGCTAGATACATACACTACTGTTTGAAGGAAAAAGAAATCTATACTTTTATCCAGCGAGGAAGCAGTTAATGATCaaaaattataatgttacaaaagctttctatttaaaatgaatgctgttgTGTCGAAccttttattaatcaaaatacattaatatatacttggcatacataatatatttgcatatatgtaCAAATCAACTGTTGAAGTGagaaatacatattataagGATCTACTGGGTGATCTACTTTCCAGCAAAGCATTATAACAAACATTAATTCggtgtatatgtataatgtatatataaatattacatttgatatATGATTTCTAGTATAAATGAATATATctaatatagattttttctgaaatttttatattatttaaaatattataaaatattatttatgtatacataataaacatacacagtttATTCTGGATGTGAATAAtagcaattaatcatttgaaagctctacaaaaaattcaaaattaaataaagaaaacctgtttttttatgtcatgGCTCCTTTAAAAAGACTCATTTTATTTGCAGTTCATCCGGCTCCCCTAAAGAGGTCGGCATTACTTTAACTCTAACCCTGTATTTCGATTAATTACATAACTAATTATGAATGCATAATACTTAAGATAATTACAAATTACACACATTAGTGATCATTTTACCTAACTGGATGCGCTCATATAACAGGACTACACACAGGAACACTAGAAAAAGTGACTTATGAATAGCAAAAGTACATTAAATGTGCATCGGTCATGCAAGCACGGCTTACAAACAAAAAGAGGACATCTACAAACACAACAATTTCAGTAGGAGCATATTCAGAGCGGGGCTTCAATAGAGTCTAATGAAGTTGACGTGATGGCAAAGTTGCCTACCGCGTGCCTTTCTCTAGTTTGCGTTCACAAATGTGATACAGTTTCCTGTGACAGTCGGCATCATGAATCAGCTTTCGATGCACTGCGTCAGAGCCTTTTAAGTGAGCACAGGACTCCATATCCCAAAGAGCAGGTTGATTTTTATCCCAGAAC
>XM_043246667.1
GAAATTGATAtgcatttatcatatttataagaAAGACAAtaaattaaaggttttatgAGAATAATTTTGGTCATAAACATAGTATACACTCTTTCTATTGAACAGAGAAGTATGTATTAATGATGTCAGACGGAAATTACCCATTTAAACCGAGATCTGAGCTAAAATTCCTATTGTTTTGTGACCCTTAATGCCTTTTTAAATCCTTTTGATCATGAACTGACTTTTGTCTACtgtgaaaaagattttttaaagagcgtatttatttatttaagaatatCATGGCCACTTTTTCCATATACTGACACACTGTAAGCCATCAAGTTTCATGAAGGATGCACAAAATCGTAAAACAAAAGTGGTTCATCATGAGAAACACATTACAAATTTGAATAGCTTTGTGAATACGAAAGCATTTTATCTTTTTCAGACAGTTTGGCAACAGAACAGCTGTTTATTAAGAGATACAGTTGTTAGcataacatttagattttattgcaCTGCAAATCAGTATGAAGCACTGATAAACTCTCACTGTTCAACAGTGCTGGCAACTCTAGACTACAGAGCGCTGTGGCAGTTCAGGGCTATGATCCTCTGTACCATCCCTGATAGCTGGCCTTTACTGGATTACGCAGACTACGGATGTTATTGTGGAAAAGGAGGCTCCGGCACCCCTGTGGATGAACTGGACAGGTGCTGTGAAGTGCATGATCAGTGTTATTCTGACTCATGGCAGCATGATGACTGCTGGGGTATCTTAGACAACCCCTACACTGAAGTCTACTCATTCTCATGTGACAAAGCAGCTAGGAAAATCACCTGCAGTGctGACAAAAATCGTCCCTGTGAGATGTTCATCTGTGAATGTGACAGGAAAGCAGCTGAATGCTTTGCACAGGCGGGTTACAACCCAGAACACGAGCACTATCCCAGTGAAAACtgcaaatgaactgaaactccATTAAAGCTTAGGATTGTCCCCAAAGTCTTATTAAAGATAGCAATGGAATAGCatcaaaagttaatttttttgcttatgCCAATTGATATTTAATTCATAGCAGACACATTCTTTGATCTtatatgttaatttattcatgcaattaaagtattactttttaaaaattattagtcttttttttccagtaaacaTAGTTATATATGTAGTGTTAGATACTAAGACTTCGGAGAATACAGTTTCTTGTGATAGAATTCATACACCataatgtgaaagaaaaaaaaactgttttaacatctttgcaaatacattgaaaaaaaaaacctattctattgcaaaagtattcatacccatAT
>XM_043246668.1
AATTAAGCACACTTCTATTTTTACAACCTCTATATTTCTCTTTTACACAGTAATGAGTGTGAAATCTGCCAAATATGCAAGACCAGCAGTAagtaaatacacatgcataatgGTGTTATTTGTTGTGATTTGGATgatttgaaaaagcttttgtgTGCTGAGGGCTGTTTGTACTTAAGAGTTTTGCAACTTTTTCCAAGccttatgcttttttttttttttttttttttttttttttttttttggagaaaaatgAGTTCCTCTTGTACCAGCTGTGCAAATGGCAAACATATGCTGACTTTCCCAaagatctcacacacacacacacacacacacacacgtagacacagtacataaacacacacagctttgtTACAAAATTGTAACAGTATCTGTACATTTGGgcacttgtgtgtgtgcatgtgcattaaCATATCTTACGTGCATAATTCACACTTATCAATGTGCTCCGCCCATCAAGGTTATTTAAATAAGTTATAGAGCTATAAATAAATGGCTACTAACACTCGTACCCTTGTAATCTTCACCATGAACACCTTCCTGTCTGTTGTGATCCTGAGCGTGAGTCTGCCCACCTTGCTGGCAACTCTAGACTACAGAGCGCTGTGGCAGTTCAGGGCTATGATCCTCTGTACCATCCCTGATAGCTGGCCTTTACTGGATTACGCAGACTACGGATGTTATTGTGGAAAAGGAGGCTCCGGCACCCCTGTGGATGAACTGGACAGGTGCTGTGAAGTGCATGATCAGTGTTATTCTGACTCATGGCAGCATGATGACTGCTGGGGTATCTTAGACAACCCCTACACTGAAGTCTACTCATTCTCATGTGACAAAGCAGCTAGGAAAATCACCTGCAGTGctGACAAAAATCGTCCCTGTGAGATGTTCATCTGTGAATGTGACAGGAAAGCAGCTGAATGCTTTGCACAGGCGGGTTACAACCCAGAACACGAGCACTATCCCAGTGAAAACtgcaaatgaactgaaactccATTAAAGCTTAGGATTGTCCCCAAAGTCTTATTAAAGATAGCAATGGAATAGCatcaaaagttaatttttttgcttatgCCAATTGATATTTAATTCATAGCAGACACATTCTTTGATCTtatatgttaatttattcatgcaattaaagtattactttttaaaaattattagtcttttttttccagtaaacaTAGTTATATATGTAGTGTTAGATACTAAGACTTCGGAGAATACAGTTTCTTGTGATAGAATTCATACACCataatgtgaaagaaaaaaaaactgttttaacatctttgcaaatacattgaaaaaaaaaacctattctattgcaaaagtattcatacccatAT

Function

symbol description
pla2g1b Predicted to enable calcium ion binding activity and carboxylic ester hydrolase activity. Predicted to act upstream of or within arachidonic acid secretion; lipid catabolic process; and phospholipid metabolic process. Predicted to be located in extracellular region. Orthologous to human PLA2G1B (phospholipase A2 group IB).

NR:

description
PREDICTED: phospholipase A2, minor isoenzyme-like

GO:

id name namespace
GO:0006644 phospholipid metabolic process biological_process
GO:0016042 lipid catabolic process biological_process
GO:0005576 extracellular region cellular_component
GO:0005509 calcium ion binding molecular_function
GO:0004623 phospholipase A2 activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU95840 True 6606 lncRNA 0.36 5 18071485 18080569
XM_043246667.1 False 1317 mRNA 0.35 3 18074191 18075838
XM_043246668.1 False 1370 mRNA 0.37 4 18073007 18075838

Neighbor

gene id symbol gene type direction distance location
prkab1b prkab1b,LOC107687987,LOC107753114,LOC107554438,LOC107703154,LOC108412051 coding upstream 4199 18062682 ~ 18067286 (+)
msi1b msi1,LOC107687968,LOC107753116,LOC107712472,LOC107550984 coding upstream 17644 18037240 ~ 18053841 (+)
lzts1 lzts1,LOC107712471,LOC107687967,LOC107703152,LOC107753115,LOC107554439 coding upstream 38723 18011919 ~ 18032762 (+)
gfra2a gfra2a,LOC107712470,LOC107559068,LOC107687966,LOC107565329 coding upstream 156155 17855968 ~ 17915330 (+)
LOC122351016 LOC107553825,LOC107687965,LOC107748115,LOC107684514,LOC107559058 coding upstream 305861 17749662 ~ 17765624 (+)
LOC122350291 cox6a1,LOC107687992,LOC107712455,LOC107550940,LOC107753112,LOC107703158,LOC107554435 coding downstream 3863 18084432 ~ 18086643 (+)
hps4 LOC107712456,LOC107753110,LOC107687970,LOC107703156,LOC107554431,LOC107550983 coding downstream 6221 18086790 ~ 18094640 (+)
si:ch211-170d8.2 LOC107550939,LOC107753111,LOC107703157,LOC107554433,LOC107687993,LOC107712458 coding downstream 14466 18095035 ~ 18098303 (+)
hnf1a hnf1a,LOC107712475,LOC107687971,LOC107550982 coding downstream 18328 18098897 ~ 18106807 (+)
ggt5a ggt5a,LOC107703163,LOC107753105,LOC107712462,LOC107550924,LOC107580168 coding downstream 153361 18233930 ~ 18241230 (+)
G64665 NA non-coding upstream 412167 17359434 ~ 17659318 (+)
LOC122350066 LOC107748143,LOC107687963,LOC107553839,LOC107684508,LOC107753120,LOC107565328 non-coding upstream 698159 17365621 ~ 17373326 (+)
G64654 NA non-coding upstream 762209 17308945 ~ 17309276 (+)
G64650 NA non-coding upstream 824761 17245952 ~ 17246724 (+)
G64639 NA non-coding upstream 901528 17169563 ~ 17169957 (+)
LOC122351024 NA non-coding downstream 73074 18153643 ~ 18158590 (+)
G64835 NA non-coding downstream 143828 18224397 ~ 18224701 (+)
G64841 NA non-coding downstream 206727 18287296 ~ 18287541 (+)
G64855 NA non-coding downstream 266868 18347437 ~ 18348783 (+)
G64858 NA non-coding downstream 286001 18366570 ~ 18367110 (+)
LOC122350299 LOC107550944,LOC107687988,LOC107753148,LOC107703140 other upstream 557 18068716 ~ 18070928 (+)
LOC122350300 LOC107687986,LOC107554413,LOC107703155,LOC101885033,LOC108412050 other upstream 9137 18056972 ~ 18062348 (+)
LOC122350649 si:ch73-138n13.1,LOC107687963,LOC107748143,LOC107553839,LOC107565328,LOC107684508,LOC107753120 other upstream 375079 17683305 ~ 17696406 (+)
G64683 LOC107684500,LOC107753151,LOC107553834,LOC107566021,LOC107687959,LOC107742747 other upstream 515137 17555696 ~ 17556348 (+)
ncor2 ncor2,LOC107687981,LOC107684513,LOC107753125,LOC107742750 other upstream 622349 17397266 ~ 17449136 (+)
lrrc75ba lrrc75ba,LOC107712478,LOC107753104,LOC107703167,LOC107554425,LOC107687975,LOC105891565,LOC108414797 other downstream 177651 18258220 ~ 18284961 (+)
sb:cb288 NA other downstream 338379 18418948 ~ 18423805 (+)
adra2b adra2b,LOC107712484,LOC107657329,LOC107554404,LOC107753091,LOC107550971,LOC107703147 other downstream 379482 18460051 ~ 18464547 (+)
gpat2 gpat2,LOC107712449,LOC107550920,LOC107657318 other downstream 485130 18565699 ~ 18600484 (+)
si:ch211-158d24.2 si:ch211-158d24.2,LOC107550960,LOC107703181,LOC107676623,LOC107728434,LOC107571139,LOC107753137 other downstream 614885 18695454 ~ 18722246 (+)

Expression


Co-expression Network