G64889


Basic Information

Item Value
gene id G64889
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 18616978 ~ 18618184 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU95975
AATGACAGGCAAACCTGAGCGAAGGACATGCAGTGAGACTCATCCTCCACGCTGGCTACGCTCAGAGACGGACTGTGCTCACTCAGATTAGGAAACATCACTCCATCTGAAAGAGACACAGGCCATAAGCACAGGAGACTAATCACTGAAGGGCTGGTCCAGACAGTGTTGAGCGTCACCTGATGAAGGGCTACCGCACAGAGGAGACGGGGGACCCAGCAGGAGCTCTGGGAGCACCTGTGAGCCGCTCTGAGGAGGAGATCCAAAAGCTGGAAAGTGCTGGAGGTTCTCCAACCCAATGTGCACCTCTGGATTTTTCCATGTTTCCTATTTTCCTCGATTTCAATTCTTTTCTCCCTTCTCTTTTCATCTCTTGCTTTCTTCTGCCTCAGGCGCTTTCGTTTCTCCAAGTCATCtgcAAGCTGTCCAAGGTCTCTTTGGAGAGAACGGGCGGCTGAAGGTTGAGCTCACACAGGCTGAACTCACAGGTGAGCGGCAGGTGAGAGAGGTAACGATGCCGCCGGCGAATCTCCTACAAAACAAGATTATCCGATCAGTTTCTTCGCTAGGCATTACTGAACCGGTTCAAGACCTTGTACTTTTATCCGTCGGGCTTCAGTAGCGCTGTGACTTCAGAGACAGATAGCTCCATGGCAGTACCAGTACTTTGTGAGATGAACATGTACCTCGGTGACAGTCTGTCCATCAATCTCCACTACAGTAGCGGTGATGGTCTGGGGGCTGTTCTCCAGGCTCCCGTACTGTCTCAGAAGACAGCGTACGTTCACTGGGTGCAGAAACATCTGCTGGCCA

Function

GO:

id name namespace
GO:0030163 protein catabolic process biological_process
GO:0016592 mediator complex cellular_component

KEGG:

id description
ko04120 Ubiquitin mediated proteolysis

RNA

RNA id representative length rna type GC content exon number start site end site
TU95975 True 813 lncRNA 0.52 3 18616978 18618184

Neighbor

gene id symbol gene type direction distance location
zgc:152830 zgc:152830,LOC107550967,LOC107657328,LOC107703177,LOC107554415,LOC107712486 coding upstream 2086 18608715 ~ 18614892 (+)
dusp2 dusp2,LOC107657330,LOC107712482,LOC107550972,LOC107554416,LOC107703175 coding upstream 160439 18453576 ~ 18456539 (+)
LOC122350731 LOC107703135,LOC107753145,LOC107550932,LOC107712468,LOC107657321 coding upstream 169917 18443075 ~ 18447061 (+)
gck gck,LOC107657322,LOC107550933,LOC107712466,LOC107753094,LOC107703174 coding upstream 199958 18408086 ~ 18417020 (+)
orai1a orai1a,orai1,LOC107550979,LOC107687980,LOC107703171,LOC107753099,LOC106585507 coding upstream 262712 18349093 ~ 18354266 (+)
olfml2a olfml2a,LOC107657324,LOC107550966,LOC107554414,LOC107703179 coding downstream 16112 18634296 ~ 18651554 (+)
LOC122350979 LOC107728433,LOC107676613 coding downstream 45762 18663946 ~ 18672229 (+)
arpc5la arpc5la,LOC107571143,LOC107728439,LOC107550963,LOC107676626,LOC107753090,LOC108411248 coding downstream 57135 18675319 ~ 18678826 (+)
si:ch211-158d24.4 NA coding downstream 107599 18725783 ~ 18729136 (+)
si:dkeyp-14d3.1 si:dkeyp-14d3.1,LOC107676622,LOC107728438,LOC107659267,LOC107550917,LOC107753136 coding downstream 143463 18761647 ~ 18941677 (+)
G64878 NA non-coding upstream 165614 18451042 ~ 18451364 (+)
G64862 NA non-coding upstream 225767 18390674 ~ 18391211 (+)
G64858 NA non-coding upstream 249868 18366570 ~ 18367110 (+)
G64855 NA non-coding upstream 268195 18347437 ~ 18348783 (+)
G64841 NA non-coding upstream 329437 18287296 ~ 18287541 (+)
G64910 NA non-coding downstream 55783 18673967 ~ 18674344 (+)
G65073 LOC107564452,LOC107733255,LOC107755688,LOC107702821,LOC107733264,LOC107668424,LOC553487,LOC107564453 non-coding downstream 393749 19011933 ~ 19234600 (+)
G65094 NA non-coding downstream 431098 19049282 ~ 19212125 (+)
G65108 NA non-coding downstream 565506 19183690 ~ 19347044 (+)
G65074 NA non-coding downstream 606385 19224569 ~ 19233384 (+)
gpat2 gpat2,LOC107712449,LOC107550920,LOC107657318 other upstream 16494 18565699 ~ 18600484 (+)
adra2b adra2b,LOC107712484,LOC107657329,LOC107554404,LOC107753091,LOC107550971,LOC107703147 other upstream 152431 18460051 ~ 18464547 (+)
sb:cb288 NA other upstream 193173 18418948 ~ 18423805 (+)
lrrc75ba lrrc75ba,LOC107712478,LOC107753104,LOC107703167,LOC107554425,LOC107687975,LOC105891565,LOC108414797 other upstream 332017 18258220 ~ 18284961 (+)
LOC122350298 pla2g1b,LOC107703141,LOC107753147,LOC107554411,LOC107554412,LOC107550943 other upstream 536409 18071485 ~ 18080569 (+)
si:ch211-158d24.2 si:ch211-158d24.2,LOC107550960,LOC107703181,LOC107676623,LOC107728434,LOC107571139,LOC107753137 other downstream 77270 18695454 ~ 18722246 (+)
G65100 sf3a1,LOC107564451,LOC107550953 other downstream 476763 19094947 ~ 19096071 (+)
G65105 LOC107747205,LOC107550912,LOC107683889,LOC108412149 other downstream 501760 19119944 ~ 19152305 (+)
LOC122350733 LOC107702875,LOC107722994,LOC107591954,LOC107573969,LOC107722996,LOC107691581 other downstream 581804 19199988 ~ 19201687 (+)
pqbp1 pqbp1,LOC107702814,LOC107683912,LOC107747222 other downstream 653908 19272092 ~ 19273770 (+)

Expression


Co-expression Network