G64966


Basic Information

Item Value
gene id G64966
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 18126185 ~ 18128804 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU96072
ctctttcttgtgTTTCTCCTGGTGCAGTGGATACGTGCTGTGACGTGCAGGCTGACCGGTTATACACTGCTCTCTACAGGGAACAAGAGAAAAGGAATTATTCTCTGCATTCATGGAGTGGATACGTGCTGTGACGTGCAGGCTGACCGGTTATACACTGCTCTCTACAGGGAACAAGAGAAAAGGAATTATTCTCGGCATTCATGGAGGATTTATAAGCCTATGACGAGTGTGGCCAGG

Function

GO:

id name namespace
GO:0019219 regulation of nucleobase-containing compound metabolic process biological_process
GO:0019222 regulation of metabolic process biological_process
GO:0080090 regulation of primary metabolic process biological_process
GO:0018130 heterocycle biosynthetic process biological_process
GO:0006351 transcription, DNA-templated biological_process
GO:0065009 regulation of molecular function biological_process
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0051171 regulation of nitrogen compound metabolic process biological_process
GO:0009889 regulation of biosynthetic process biological_process
GO:0097659 nucleic acid-templated transcription biological_process
GO:0031323 regulation of cellular metabolic process biological_process
GO:0031326 regulation of cellular biosynthetic process biological_process
GO:0051252 regulation of RNA metabolic process biological_process
GO:1903506 regulation of nucleic acid-templated transcription biological_process
GO:1901362 organic cyclic compound biosynthetic process biological_process
GO:0010468 regulation of gene expression biological_process
GO:0060255 regulation of macromolecule metabolic process biological_process
GO:2001141 regulation of RNA biosynthetic process biological_process
GO:0032774 RNA biosynthetic process biological_process
GO:0019438 aromatic compound biosynthetic process biological_process
GO:0010556 regulation of macromolecule biosynthetic process biological_process
GO:0034654 nucleobase-containing compound biosynthetic process biological_process
GO:0051090 regulation of DNA-binding transcription factor activity biological_process
GO:2000112 regulation of cellular macromolecule biosynthetic process biological_process
GO:0021514 ventral spinal cord interneuron differentiation biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU96072 True 240 lncRNA 0.48 2 18126185 18128804

Neighbor

gene id symbol gene type direction distance location
si:ch211-170d8.8 LOC107712454,LOC107687991,LOC107550941,LOC107554434 coding downstream 43568 18079945 ~ 18082617 (-)
asgrl1 LOC107580964 coding downstream 46702 18075597 ~ 18079483 (-)
si:dkey-63d15.12 NA coding downstream 69908 18053359 ~ 18056277 (-)
LOC122350049 LOC107748126,LOC107553823,LOC107687983,LOC107549670,LOC107697074,LOC107697075 coding downstream 419694 17701512 ~ 17706491 (-)
crybb2 crybb2,LOC107565327,LOC107753119,LOC107684510,LOC107553840,LOC107687964,LOC107748132 coding downstream 426770 17697175 ~ 17699415 (-)
LOC122349911 LOC107569538,LOC107747839,LOC107694233,LOC107554410,LOC107703160 coding upstream 2690 18131494 ~ 18143145 (-)
LOC122351022 NA coding upstream 29493 18158297 ~ 18162389 (-)
c8h12orf43 NA coding upstream 57454 18186258 ~ 18188684 (-)
unc119.1 unc119b,unc119.1,LOC107753165,LOC107712459,LOC107550938,LOC107687994 coding upstream 61691 18190495 ~ 18196236 (-)
mlec mlec,LOC107687973,LOC107703166,LOC107712476,LOC107550980,LOC107554429 coding upstream 68222 18197026 ~ 18204992 (-)
LOC122350292 hnf1a,LOC107687971,LOC107550982,LOC107712475 non-coding downstream 23172 18096095 ~ 18103013 (-)
G64942 lzts1,LOC107712471,LOC107687967,LOC107550927,LOC107554439,LOC107753115,LOC107703152 non-coding downstream 93459 18029535 ~ 18032726 (-)
G64777 NA non-coding downstream 380261 17745685 ~ 17745924 (-)
G64757 NA non-coding downstream 461053 17661349 ~ 17665132 (-)
LOC122350842 NA non-coding downstream 465207 17657809 ~ 17660978 (-)
G64992 NA non-coding upstream 156681 18285485 ~ 18285734 (-)
G65010 NA non-coding upstream 236635 18365439 ~ 18365779 (-)
G65011 NA non-coding upstream 238622 18367426 ~ 18367640 (-)
G65012 dusp2,LOC107657330,LOC107550972,LOC107712482,LOC107753144,LOC107554416,LOC107703175,LOC108265928 non-coding upstream 324777 18453581 ~ 18459309 (-)
G65038 LOC107550967,LOC107712486,LOC107657328,LOC107753142,LOC107703177,LOC107554415 non-coding upstream 483799 18612603 ~ 18614897 (-)
LOC122350290 LOC107569538,LOC107747839,LOC107554410,LOC107703160,LOC107694233 other downstream 13484 18107453 ~ 18112701 (-)
kcnip3a kcnip3a,LOC108440810,LOC107684506,LOC107553838,LOC107566017,LOC102307840,LOC108264878,LOC101482209,LOC103397788,LOC107753121,LOC107687962,LOC102210345,LOC108233759,LOC102228939,LOC102799407,LOC104951840,LOC102798027 other downstream 480674 17601258 ~ 17645511 (-)
LOC122350953 NA other downstream 724957 17320376 ~ 17401228 (-)
zgc:194007 NA other downstream 764335 17359385 ~ 17361850 (-)
LOC122350945 drd2b,LOC107745132,LOC107705176,LOC107691748,LOC107664308,LOC107600777,LOC107556418,LOC108428674 other downstream 1029390 17046467 ~ 17096795 (-)
G64967 NA other upstream 26331 18155135 ~ 18157543 (-)
tbc1d10aa tbc1d10aa,LOC107657331,LOC107712481,LOC107550973,LOC107753095,LOC107703173,LOC107554420 other upstream 261859 18390663 ~ 18401938 (-)
G65033 NA other upstream 430863 18559667 ~ 18560334 (-)
LOC122350102 LOC107717958,LOC107676625,LOC107550916,LOC107682323,LOC107659265 other upstream 894909 19023713 ~ 19047969 (-)
LOC122351133 NA other upstream 1073473 19202277 ~ 19202377 (-)

Expression


Co-expression Network