tbc1d10aa (tbc1d10aa,LOC107657331,LOC107712481,LOC107550973,LOC107753095,LOC107703173,LOC107554420)


Basic Information

Item Value
gene id tbc1d10aa
gene name tbc1d10aa,LOC107657331,LOC107712481,LOC107550973,LOC107753095,LOC107703173,LOC107554420
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 18390663 ~ 18401938 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU96143
GTCGCAGACATACTAGATGTGATGTTGGAGTGTCTCTTTAACAAATCAGATGTATTTATTTCGTTGCTAATATGAGAAACTGAAGACTGTAAACCCATCTCATCTCAAGCCACCAGGTGGCGCACGTTTCCTACAGATCATTCATTTAGTTTGCTCAACTGTCAGAGATGTCAGCCTGTTACATTGGGAATCACTAGTTACTTGTGCAGTCCTCATCTGTGAAGAGAATGTGTGACACAGCTGAaagtgctgctgctgttttgttttcGGGCGCAGACACGATTGCATGTTATCTGGGGagtcatttttattcacattgcattttaataataactcCAGTTATTAACTATTCTAATCTGtcagattttcaaatgcaatttattgttTCAGATTATGGGAGCactgtttgctttttgtttgcttttgtttttttttaactaatgcTACATAAGAACTTTGatatataaatcaatcaatcctCAACAACTGACTGTCGCCTATATGTAGgttttgtacaaaataaaagcac
>XM_043246914.1
GCGCGCATGTGCAGAACTGTCAAACGCGTCGAAAGCCTGGAAACTCGGCGCTAATGTCTCCGCCGCCACCCAAACACTAACACCACGGCTCGACCGACGCGTCAGCTGCTTTATTATTTACCTTTCTACAATGAGACCAAGATTTAAAACACGGAAACAACACCGTCGCTGCGCCTCGACTGGGAATACAGCCGGGTTTCCTCCTCGGACCTCTGCGTGCTGAATGAAGACAGTCCGCTGAAGCCGTTCCCGACGAGCCGTGGACTGGAAAAATGTGATTCGGGAAATCGGGCGTAGTTTCGCTGCTCCGGTGGTTTACGCGTTTTCCGGACGACGTTTCTGCTCGCGTGAAGTACTTTTCGAGCGGCCGCTGTTTGCGGGGCTGCGGGCCGGACGGTGACACGTTGCGCGCTAAGCTAATTTAGCATTTAACTCGGGGGATTCAGACGCAGCGGTAATCCGTTTACAGGACGCCGCGGCTGTTTAGAGACGCGCGGATCCGCGCAACGTTACAAAACACGGCGAATAAAGCCGAAGCGGACCTGGGCGAGGTCGTGTGGTTTCGGCCGGCCTGTTTTGGGATCAAGCGTCTGGTTAATTTCACGTTTTCTCTCGGGATGTTCACTGACGGGTGCAGGTGATGACCTGTAAGTGAACTTATCGtcggtgtgtgtgcgtgtgagagaggATCGTGATGGCTCAGCGGGAGAATGGACGCCTGTCGTCCGAGGACACTATGAGCGTGAGGACACTGGGCAGTCAGTTCGACGAGGAGAGCTCTTTCGGGTCGGACTCGGAGATCAACGGCTTCACCAGCTCGAGGCAAACGGACAAGTACGGGTTCATCGGGGGAGCCCAGCAGTATTCGGCCGAATCGGCTCAAGACGTGCCTCTGGAAGTGTTAAGGCACAGGGAAGCCAAATGGTTGGATATGTTGAACCACTGGGACAAATGGATCGGTAAAAGATTCAAGAAGGTGCGACTGCGATGTCAGAAGGGAGTCCCGCCATCACTGCGAGGCAGAGCCTGGCTCTACCTGTCGGGTGGAAAAGTGAAGCGAGAACACAACAAAGGGAAGTTCGATGAGTTGGATGGCATGAGTGGAGACCCTAAGTGGGTTGATGTGATAGTGAGAGATCTGCACAGACAGTTCCCCTTCCATGAGATGTTTGTGTCCCGAGGAGGTCATGGGCAGCAGGACCTGTTCCGGGTGTTGAAGGCTTACACCCTGTACAGACCGGATGAGGGTTACTGCCAGGCTCAGGCTCCTATAGCAGCAGTGCTTCTAATGCACATGCCTGCTGAGGATGCATTCTGGGGGCTGGTTCAAATCTGTGAGAAGTACCTCCCTGGATATTACAGCGCAGGCCTGgAGGCCATACAGTTGGATGGAGAGATCTTAAATGCGTTATTAAAGCGCGTGAGCCCTCCGGCTTATCGTCATCTTGAGAAACACAAGATAGAGCCCATCCTCTACATGACGGAGTGGTTCATGTGTGCATTTTCCAGAACTCTACCCTGGGCGTCTGTGCTCAGAGTGTGGGACATGTTCCTGTGTGACGGAGTGAAGATTATATTCCGTGTTGGGCTGGTGCTGCTGAAATGCATGCTGGGATCTCGTGAGAAACTGAAGGCCTGTCCCGGTCAGTACGAGACTATGGAGCTTCTCAGGGCCCTGGAGCCACGATACATGCAGGAGGGCTTTCTCGTTCATCAGATATTAGAGCTGCCCATATCCTCCCGGGATGTGGAGCGAGAGCACCGCGTACAGCTCAAGCGCTGGAGGAAAACTCACGGCGAGCTCAGCTACAAGTCCCCTCCCAGAATGCACGGCGCTCACGCCATCATGTCAGCCGAGCCCCACACCCGCCAAGACCTCCGGCAGAAGCCCACCATCATCGTCCAGTACCCCTTGCCCTCAGACACTAAATCAGAATTCGCGCGCGAAAAGAAGAGAAGCACTATCCGAAAAGCCCCCAGCCTGACAGTGGACTTCCCAAACCCCTACGCCCTGCCTACAGACCCCAAACCAGCCAATCAAACACAAGAGACGGCCTCGAGCAATGAGTCCAGCCGTCCTCCTCCATCACTACAGCCACCCGACCTCACTACACCCTCCTCCGCCCCGCAGCCTCCTCATCCGTCTCCAAAGCTGTCTCGCACCCCGCCACCTCCCCAACCCTTCCCCAAACCCGCACATCCCACCGGGCCCCCTGCGGTCAGCGTCCCGCCGCTCTCTCTGCCCAAACACTCGAGCAACACCAACAACTCGGCGCGCCTGACAGATCCTCCACCCGCCACGGACTCCGCTCCGCCTCCTCCGGAACCCTCACCCGTGAACGGGAACTCTGCCGATGCTCCCAGAGTTCCCGCTTTGCGTAACTCCTGCGAGAGCGTGGGGTCGGAAGACACGTACCTGTAGCTTTCCACGTCAGCAGCGTTCAGGGAGAAAAAAGTATTGGGAACCAGCATTATTCGTGAGAGTAAGATGGGAGAAACAACtatgaatgtattttgattttctttggGTGAGGTGACAGAAAATTTAGTCTTCAGTATTTTACGCTAGTTAGTGTGAAGAACTTAAGAATTTATATAAAGCTTAATGACAAGGATCGAATGACTTAAAGACCTCTGAGACGTCGTTTCGGTGTCCGTGCACACAAacccttttttctctctgtgaggGTCCATAATTGATTCCACAGACTTTGTTGCAATgttcaaaaaaaatctaacaattCTTCCATTTATTTCTCAATCATAAGCAGACTTTATAATCGAAGATGTTTGGCTTGTTGTTGTGTTATTCGCTGCTTATCAATGTTAGGTCACGTTGCAGTTAATAATGTATGACTCTCGATTCTAACTAGTCTTACGTTGACTTACAACTGCCACTAttataagtttttgtttagtttttttttttccttttttaataaacagtttaaTGTATAACTCGCGTAAGTGCAAACGAGCATTTTGTGTGTCAACATTATGTCTGTTACCATTAGCTACATTCAAATGTGAGTTAAATAAAGCAGTTAAAAGTGAAAGCATaaactttactttaaaaaaaaaaaaaaaaagtgcaaatattgtattttttagttGCGTAAAAGCTTGAcactggggtggtacctttgAAATGACAACTTTGTATCTTTAAAGAGGTGCGTATTAGCTCCTTTTGAGAGGCgttttgttgtaaaattaagTACAAATTTGTCCCGTTAAGGATATTTCTCAAGTGACAAGCTTATTTTTCACATcttttgtttgaaaaagaaatgtatgaGTACTTTCTtctgatttttataaatttttataaactatatatatatatatatatatatatatatatatatatatatatatatatatatatatataacattgtgGAACATTGGAGTCGCAGACATACTAGATGTGATGTTGGAGTGTCTCTTTAACAAATCAGATGTATTTATTTCGTTGCTAATATGAGAAACTGAAGACTGTAAACCCATCTCATCTCAAGCCACCAGGTGGCGCACGTTTCCTACAGATCATTCATTTAGTTTGCTCAACTGTCAGAGATGTCAGCCTGTTACATTGGGAATCACTAGTTACTTGTGCAGTCCTCATCTGTGAAGAGAATGTGTGACACAGCTGAaagtgctgctgctgttttgttttcGGGCGCAGACACGATTGCATGTTATCTGGGGagtcatttttattcacattgcattttaataataactcCAGTTATTAACTATTCTAATCTGtcagattttcaaatgcaatttattgttTCAGATTATGGGAGCactgtttgctttttgtttgcttttgtttttttttaactaatgcTACATAAGAACTTTGatatataaatcaatcaatcctCAACAACTGACTGTCGCCTATATGTAGgttttgtacaaaataaaagcacttctaATAAGA

Function

symbol description
tbc1d10aa Predicted to enable GTPase activator activity. Predicted to be involved in activation of GTPase activity and intracellular protein transport. Orthologous to human TBC1D10A (TBC1 domain family member 10A).

NR:

description
PREDICTED: TBC1 domain family member 10A-like

GO: NA

KEGG:

id description
K19944 TBC1D10; TBC1 domain family member 10

RNA

RNA id representative length rna type GC content exon number start site end site
TU96143 False 529 lncRNA 0.37 1 18390674 18391202
XM_043246914.1 True 3951 mRNA 0.47 9 18390663 18401938

Neighbor

gene id symbol gene type direction distance location
aplnra aplnra,LOC107712463,LOC107550977,LOC107554406,LOC107687998,LOC107703172,LOC107753098 coding downstream 25338 18363240 ~ 18365325 (-)
kdm2ba LOC107687979,LOC107712479,LOC107550974,LOC107753096 coding downstream 40958 18333953 ~ 18349705 (-)
anapc5 anapc5,LOC107687977,LOC107703168 coding downstream 93129 18290548 ~ 18297534 (-)
gpx8 gpx8,LOC107687977,LOC107554409 coding downstream 100777 18288096 ~ 18289886 (-)
ggt1a ggt1a,ggt1,LOC107550935,LOC107712477,LOC107753164,LOC107703144,LOC107554426,LOC105891568 coding downstream 132491 18243141 ~ 18258172 (-)
myl7 myl7,LOC107753162,LOC107703146,LOC107554405,LOC107550934,LOC107657323 coding upstream 1748 18403686 ~ 18405670 (-)
npc1l1 npc1l1 coding upstream 22006 18423944 ~ 18436168 (-)
fahd2a fahd2a,LOC107753161,LOC107703178,LOC107554403,LOC107712485,LOC107550970,LOC105902774 coding upstream 199229 18601167 ~ 18608205 (-)
rnf10 rnf10,LOC107703176 coding upstream 213124 18615062 ~ 18623933 (-)
pop5 pop5,LOC107712469 coding upstream 222195 18624133 ~ 18626304 (-)
G65011 NA non-coding downstream 23023 18367426 ~ 18367640 (-)
G65010 NA non-coding downstream 24884 18365439 ~ 18365779 (-)
G64992 NA non-coding downstream 104929 18285485 ~ 18285734 (-)
G64966 NA non-coding downstream 261859 18126185 ~ 18128804 (-)
LOC122350292 hnf1a,LOC107687971,LOC107550982,LOC107712475 non-coding downstream 287650 18096095 ~ 18103013 (-)
G65012 dusp2,LOC107657330,LOC107550972,LOC107712482,LOC107753144,LOC107554416,LOC107703175,LOC108265928 non-coding upstream 51643 18453581 ~ 18459309 (-)
G65038 LOC107550967,LOC107712486,LOC107657328,LOC107753142,LOC107703177,LOC107554415 non-coding upstream 210665 18612603 ~ 18614897 (-)
G65055 NA non-coding upstream 293112 18695050 ~ 18695350 (-)
G65157 NA non-coding upstream 325839 18727777 ~ 18729142 (-)
G65175 NA non-coding upstream 563350 18965288 ~ 18996693 (-)
G64967 NA other downstream 233120 18155135 ~ 18157543 (-)
LOC122350290 LOC107569538,LOC107747839,LOC107554410,LOC107703160,LOC107694233 other downstream 277962 18107453 ~ 18112701 (-)
kcnip3a kcnip3a,LOC108440810,LOC107684506,LOC107553838,LOC107566017,LOC102307840,LOC108264878,LOC101482209,LOC103397788,LOC107753121,LOC107687962,LOC102210345,LOC108233759,LOC102228939,LOC102799407,LOC104951840,LOC102798027 other downstream 745152 17601258 ~ 17645511 (-)
LOC122350953 NA other downstream 989435 17320376 ~ 17401228 (-)
zgc:194007 NA other downstream 1028813 17359385 ~ 17361850 (-)
G65033 NA other upstream 157729 18559667 ~ 18560334 (-)
LOC122350102 LOC107717958,LOC107676625,LOC107550916,LOC107682323,LOC107659265 other upstream 621775 19023713 ~ 19047969 (-)
LOC122351133 NA other upstream 800339 19202277 ~ 19202377 (-)
si:ch211-218o21.4 si:ch211-218o21.4,LOC107550930,LOC107702847,LOC107727198,LOC107747209,LOC107683911 other upstream 1026800 19428738 ~ 19433291 (-)
zgc:154046 adamts13,zgc:154046,LOC107702807,LOC107548275,LOC107722731,LOC107702859,LOC108426726,LOC108265337,LOC107740996,LOC107565124,LOC107691587 other upstream 1716069 20118007 ~ 20134345 (-)

Expression


Co-expression Network