G65108


Basic Information

Item Value
gene id G65108
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 19183690 ~ 19347044 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU96292
ATCAGGAGCTAGTGTGTCTGAGTGTAGCGCTTCTGCAGCCAGTATCTCTGGCCTCTCAATGTATCTGAGTGAAAGCCTTagcttgaaacacacacaaagggcCCCGGGGCCTCCACTTCCAGGCCCCTGGctcaaacccagctcacgtAGGCTCGTCAGAGAGGTTGAGAAAGGTGGAGAAACTGAAACATGATTTATGTCGTAAAAGCAGCCATCACTATTACTACTAAACCTTAAGCTACTTATTTGTGGCGTATATCTGATAGAAATGGATTTTTtcgaaaagaaagaaatgcaggACGGGGAAAATATGTTGGTAGATGATTGGATGGAGGCAGATGTGAATAGAAGTTTGCAGTTGATTGTAAGGGGCGGAGCTTAAGTGGAGGAAATCTAGTATACGTCACCAGTAGCAGCAGTGTTGACAATGAACCATTCTTTACGTGCAGATTTCCATAAAATTTTGATTATATGACTGCGCCTAAAGAGTAAGATTTTTTGACTTGGTCAGTATGAAATTGgcataaatttgcatttacCAGGCACTTTATCCAAGGTAATCTAAAAATGAGTAACAGAACAAGCAATTTGTGCCAACAGCATTCATAGTACTCAATGCCAGGTTTTAAGTATGAGGTATTTTAATGCAGAACCGTCTAGAATATGCTTGGAAACAGCATTGCAGCCATCCACAGTGATGGAGCATCATGGTGGTGAGTTATaggacattattattattattacggtTTGGATTTTGAATACTCCCACTCCAGCTCGCTCTCTTAAGccttcctctcttcttctcttccacTTTGTCCTCTATAATGAAAGTCTGCAGTAACCAACAACATCTTTTACTTTTTGTGCCAGACTGTCTGTATGGTATGTTGACTTTGTATGCAACAAAACTATCACGTGAAGGGCCAAATATTCTCTTTATCTTCGATGCTAGCTTGAGTCCAGTTTGAACCTTTAGCACAGTCACTTTTCTGTTCAGTTCTGCTGTTTGAACTCTTTTTAATCTGCATATAAACCAGCAGAATACTGGCGTGCATTTCGTTAGCCACAAATTATCATTCAAACGTCTGGAGgcagtacttttttatttttgataaatcaaatcagcatgttagaataatATCTGtaggatcatatgacactgaagactagagtaatgacgctcagctttgcataaaaagagtaaattgcattttaaaatatactcaaataaaagaatgtcggtttaaattgcaataatatttcacaatattgctgtttttactgtatttttgatcaaccGTGCAGAGAATGAGAGTTTGACCTCAAACGTTTGAATGATAATTTAGCCCAAGAAACATTAACGTTATGAAACAAGCGCTATCCCGACCTCTGCTAAACAGCTTTTGAAGGATGATTGTTTAATTGATCATTCTTGTGAATGAtgtgtgtacttacactgtTAAGACGAGATATATTTGTCACACTCCCAAGAGTTCCCCTGAAACacttatgcattatttttatgcatttgctcATAAATCGTTATACTCATTTAATGCCCTCTGGGTCTCTGGCATCTCAGGGAGCAGATGTATACACTGTAATATTTCTTAGCCTGCCCCCATACACACTAAAAGTGACCCTTACTGCTGCCTTGGTAACAAAAGACTCCTCCTGTCTGCTGACCTTGGCCTCTGTGACCTCAGAAATGCCAATTAAGTTCAATTTAAATGTCGCATAcgattcatatttttgaaggTTTTCCTACCGACACGGTTGTATGCCATTTAAAGTGAATATAATACATCGACCTAAAACAGATGTCTTGCAGCTGTCAAAGTGTGATTAACACGTACACACAGATTAACTCTCACTCCGGCTTCTGCAAagaaaattacaatatatagtTTCAGATGAAGTATCTGTGAAAACTTTAAATGAGATTTAACTATGAAAGATGAAGTGTGATTTATAGAGAACAACAAAGTAACACTTTATGAAATGGTTCTCTTACTGCTCTTGGCAGGTTTATCCTCGTCAACCAAAAAGGACTGAATGTTtgtactgaaaatataaattggGGTTTGCAATATTGAGTGGCGTCGTGCCAAGCCTGCGAAACCTCTTTAGTTTAATGCACCCAGGGTCTTTATCTTTATTGATGAAAGCTTGCTAGTAAACACAAGAGAGAGGTTGACTGTATTATGCTCTTGTTAACTGTAGCTTGTTAACTGTAGATATACCGatgatattttagcatttaaccTAAAAACTGTGCCTACTACTTGTTTTCCTTGATGCATTTTTTGCAGTTCCCGATCCGTCGCCAAACCAAAACGCCACCCGATATGGTTCATACCGTGTGTCATTTACTCTCTACCAGAATATACGCACATTTAAACTATGCATAAGATGTTGCCATTTTAACCCACAGCAGATAATTGGGACAGCTGTTTAATCTGTGCAGCCCCAGCAGGTCTGGGATCAGTTTGTTAAAGTCGGTTTGGTGCTGGCGGTCCACGCATCTTTAAACATATCATAATGTTCAGAGTACGAGCCGATGCCACATAACAAGTCTCACactaacaaatatttattacatgttCAATCTGAAAGGTCCGTTTTAGAGTCTCACATTGTCTTTATGTACATTACCAATGTCTATGGCCATATGTACCAAttgtaaatagaaataaatatattataattatatatatatataaaatgtttctattatgattatattgttataatCCATTGTAACCCAAATGCAGGTAACAAATTATATAAGAGTTATAATAAAGATTCATGTATCTACCTGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU96292 True 2823 lncRNA 0.38 2 19183690 19347044

Neighbor

gene id symbol gene type direction distance location
LOC122350746 pqbp1,LOC107702814,LOC107683912,LOC107747222 coding upstream 76820 19105053 ~ 19106870 (+)
LOC122350065 pold2,LOC107747204 coding upstream 79843 19100306 ~ 19103847 (+)
LOC122351071 slc7a4 coding upstream 93430 19081597 ~ 19090260 (+)
glt1d1 glt1d1,LOC107676618,LOC107659266 coding upstream 160398 18996469 ~ 19023292 (+)
si:dkeyp-14d3.1 si:dkeyp-14d3.1,LOC107676622,LOC107728438,LOC107659267,LOC107550917,LOC107753136 coding upstream 242013 18761647 ~ 18941677 (+)
iqsec2b iqsec2,LOC107747221,LOC107683900,LOC107702804,LOC107570507,LOC107550910,LOC107725888 coding downstream 858 19347902 ~ 19405484 (+)
kdm5c LOC107747206,LOC107550909,LOC107683899,LOC107570512,LOC107724909,LOC107702826 coding downstream 59520 19406564 ~ 19423812 (+)
ren ren,LOC107747224,LOC107727110,LOC107570508,LOC107550929 coding downstream 104443 19451487 ~ 19456756 (+)
csf1b csf1b,LOC107683886,LOC107747213,LOC107702844 coding downstream 117551 19464595 ~ 19476656 (+)
mapkapk2b mapkapk2b,LOC107683909,LOC107550950,LOC107726784,LOC107747217,LOC107576554 coding downstream 220235 19567279 ~ 19571233 (+)
G64910 NA non-coding upstream 509346 18673967 ~ 18674344 (+)
G64889 NA non-coding upstream 565506 18616978 ~ 18618184 (+)
G64878 NA non-coding upstream 732326 18451042 ~ 18451364 (+)
G64862 NA non-coding upstream 792479 18390674 ~ 18391211 (+)
G64858 NA non-coding upstream 816580 18366570 ~ 18367110 (+)
G65119 NA non-coding downstream 58612 19405656 ~ 19482043 (+)
G65111 NA non-coding downstream 76975 19424019 ~ 19425722 (+)
G65267 NA non-coding downstream 210500 19557544 ~ 19558486 (+)
G65268 NA non-coding downstream 211829 19558873 ~ 19559169 (+)
G65284 NA non-coding downstream 347336 19694380 ~ 19752601 (+)
G65105 LOC107747205,LOC107550912,LOC107683889,LOC108412149 other upstream 31385 19119944 ~ 19152305 (+)
G65100 sf3a1,LOC107564451,LOC107550953 other upstream 87619 19094947 ~ 19096071 (+)
si:ch211-158d24.2 si:ch211-158d24.2,LOC107550960,LOC107703181,LOC107676623,LOC107728434,LOC107571139,LOC107753137 other upstream 461444 18695454 ~ 18722246 (+)
gpat2 gpat2,LOC107712449,LOC107550920,LOC107657318 other upstream 583206 18565699 ~ 18600484 (+)
adra2b adra2b,LOC107712484,LOC107657329,LOC107554404,LOC107753091,LOC107550971,LOC107703147 other upstream 719143 18460051 ~ 18464547 (+)
rfk rfk,LOC107740987,LOC107723557 other downstream 682990 20030034 ~ 20033607 (+)
timm17b timm17b,LOC107722912 other downstream 788075 20135119 ~ 20139364 (+)
LOC122350816 slc18a1,LOC107702874,LOC107722997,LOC107591929,LOC107756821,LOC107566956 other downstream 1076237 20423281 ~ 20431832 (+)
rnf122 si:ch1073-392o20.1,rnf122,LOC107747807,LOC107678386,LOC107698113,LOC108440685,LOC107563167 other downstream 1611556 20958600 ~ 20972040 (+)
ankrd39 LOC107721080,LOC107678427,LOC107559444 other downstream 1855404 21202448 ~ 21204346 (+)

Expression


Co-expression Network