G65119


Basic Information

Item Value
gene id G65119
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 19405656 ~ 19482043 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU96318
AATGTGTCTCTATGAAACCAGTCCTTTGGGCGAATTTGTGCTCACTCAGAGGAACTTGGTTCTATCACTACTTTTCAAATAGGCTGCGTACCTCAGGTGCGGAAAACAACTTAAATCTCGTGGTCTGTTGCTGGGAAGCACATGGCTCATAGCTTTGGCACACTTGTGAGCCACCACTGAAGCACTCAGTGATGGACTCCACGGTATCACAGAAGAGGCCCAGAAAGCCCGTAGCTTTACTGATCACCTCAGCAACGAGCTTTGTTCAGATGCAAGTTTgaaacatgagggtgagcaaatgggTTAACTATACCTTTTGTCAgcgttaatattaaaatgatcataaaataCATGTCATTTGGCAGCCTCTATTCTCAGCATAAGCtgcaaatttagtttttcagaCTCACCGATATGACTCAGACTGACTGGCAGATCATCATGTGTCTTTGAAATCAGGCCGATTTATTGTCACGTTTGATTTACTTCCACAGATGGGGTGCAGAATTCCTCAAAGGCAGTAGCTGGATACACGGAGCCAAAAGCCCCATCCTGGCTGCTAACAGTATGTCAAGGTCTATGGGGCTCTGGACACTCCAGAGAAGTCTCATAAGAACTCCACTCCACTGAGAGCTGATGTAAAGGCTGAATGTTTGAACATCGTGCCCTCTTTTAGTAAATGTTTCTGTAATCTGCATTCAACCAACACTAAGGTTTTAATGAACACCTGAACCTCGGCCTTCGTTGTTTTAGAAACTCATATGACATTTCTGCAGCCACTGGAGCTTTCTCAATCTTGGTCATGGAgattcaataaaaaacaaatcattaggAAAAGTATCTTTTTTTACCTGTATAATAAAAGTGCTAAAAATGGTTAAGCATTCTTAGAAATACCTTCCTTTATATTTCTGGAGAAGAAACTCAACATTAagccaaataaatattaaaataaaaaatggataaaatatatttttatttttaaagactttcTGAACAATTCTGTTTGGCTGCATCATTCCACAAACAGACAGCTGTTCGCTAACGGAGAGAGTCTGTACTACCTTTTTAGCCAGGAAACATGCCATTTTACATCATGTACCCTGGGAAAGTTGGAATATTGCCTATGGCTGAGCTGGTTCATTCTGGTATTGGAAGAAAAGGTTTGGCTTTAGCTGCTCAGAGCTGAACTATGCTTTGCGAGGCAGACTCCCAAGGTTTCAGCGCAGTTCAAATAAAGCACATTAACTGGCTATGCAAGGTTCTtcattaattttaacaaaaaagaaacattaaggTCCAATGGCAAAAACCTTACCAGACAACAGTTGTTTAAAGTGACTGTCAAgttcatgcaaatatttaaatcctGCAATACACTCGCCCCCATGTGATTCCAAACCAGCATagtttatgaatttattttttacatatgatATTTTAGACAGTGATGGTAACCAAACAGCATTGATGATTCaagaaatgaatttaaatattttaatcaaaatatagtcagtcaggtttggaacaacattaaaGCGAGTAAATTAAGAAATCTACTCAAATTAaggaattatttctttaatataaacactccaataaactacattttaaaacatctccCTCTAGAGGCGCTCTGCTCTTAATAAATCCCTTCATAACGGCATGAAAGCAAACACAGAACTCAAGTTTTACACAGTGTTGTGAAAGTCATTTAATCAGTAGAagattttagaaaaatcaaTCCTTGATTATGAAAAGTTATAAATTCAAAGATGTTTTAGAAAGCTAAATAGCTCAAGTAGACTctccagaaaaaaacaaaacaaaaaaaaaaaaaaaaaaaaactcttttttggTTGCCTTTTGTtgcttaaaaatgaagaaacaaaggATAATGAACCAGCAGTTCACAACACAATGTCCGTCATGGAAAGATGAAGACCAATGAAAATTTTAACTTGAAGACCAAACAGCTGAAGAAAcccaaacaaacagaaagacgCTCAAATACCTTTCAAAAAACACCAGAATCTCCTTCAAAACCGGTTTTCGGGAGTCAAGAGCTCATCTAGAGAGGGCGATGGTGTTACAGGTTTTCACTTACCAATAGACCACTGTACATAAAGCTTAGAGCTGGTCTGAAGCTTGCGAAACGCTGAGTGGGTGACTCTAATTGCAGAAGAACACCCCTGCTAAAATACAATACAGTCCAACTGTGAAATCTAACTTCATACAATAGGTGGCCCTCCATGACAGGACTGCCTCTGTTCATTTGGGAAGGGGGTTGTGGGATAAGCGTAGGGATCCAGATGAAGCGGGGTCAGCAGGGGCCACTCCGTGGATCACCGGTGCATGGGCCTCAGGGGCTCTGTGGCTGTGGCAGCATCTGGAAACAGGTTATGGTACGTAGGGAGAGGCACGTAGGCAGCTGTGATCATTTTA
>TU96319
GCTGCATCATTCCACAAACAGACAGCTGTTCGCTAACGGAGAGAGTCTGTACTACCTTTTTAGCCAGGAAACATGCCATTTTACATCATGTACCCTGGGAAAGTTGGAATATTGCCTATGGCTGAGCTGGTTCATTCTGGTATTGGAAGAAAAGGTTTGGCTTTAGCTGCTCAGAGCTGAACTATGCTTTGCGAGGCAGACTCCCAAGGTTTCAGCGCAGTTCAAATAAAGCACATTAACTGGCTATGCAAGGTTCTtcattaattttaacaaaaaagaaacattaaggTCCAATGGCAAAAACCTTACCAGACAACAGTTGTTTAAAGTGACTGTCAAgttcatgcaaatatttaaatcctGCAATACACTCGCCCCCATGTGATTCCAAACCAGCATagtttatgaatttattttttacatatgatATTTTAGACAGTGATGGTAACCAAACAGCATTGATGATTCaagaaatgaatttaaatattttaatcaaaatatagtcagtcaggtttggaacaacattaaaGCGAGTAAATTAAGAAATCTACTCAAATTAaggaattatttctttaatataaacactccaataaactacattttaaaacatctccCTCTAGAGGCGCTCTGCTCTTAATAAATCCCTTCATAACGGCATGAAAGCAAACACAGAACTCAAGTTTTACACAGTGTTGTGAAAGTCATTTAATCAGTAGAagattttagaaaaatcaaTCCTTGATTATGAAAAGTTATAAATTCAAAGATGTTTTAGAAAGCTAAATAGCTCAAGTAGACTctccagaaaaaaacaaaacaaaaaaaaaaaaaaaaaaaaactcttttttggTTGCCTTTTGTtgcttaaaaatgaagaaacaaaggATAATGAACCAGCAGTTCACAACACAATGTCCGTCATGGAAAGATGAAGACCAATGAAAATTTTAACTTGAAGACCAAACAGCTGAAGAAAcccaaacaaacagaaagacgCTCAAATACCTTTCAAAAAACACCAGAATCTCCTTCAAAACCGGTTTTCGGGAGTCAAGAGCTCATCTAGAGAGGGCGATGGTGTTACAGGTTTTCACTTACCAATAGACCACTGTACATAAAGCTTAGAGCTGGTCTGAAGCTTGCGAAACGCTGAGTGGGTGACTCTAATTGCAGAAGAACACCCCTGCTAAAATACAATACAGTCCAACTGTGAAATCTAACTTCATACAATAGGTGGCCCTCCATGACAGGACTGCCTCTGTTCATTTGGGAAGGGGGTTGTGGGATAAGCGTAGGGATCCAGATGAAGCGGGGTCAGCAGGGGCCACTCCGTGGATCACCGGTGCATGGGCCTCAGGGGCTCTGTGGCTGTGGCAGCATCTGGAAACAGGTTATGGTACGTAGGGAGAGGCACGTAGGCAGCTGTGATCATTTTA
>TU96320
aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaactcttttttggTTGCCTTTTGTtgcttaaaaatgaagaaacaaaggATAATGAACCAGCAGTTCACAACACAATGTCCGTCATGGAAAGATGAAGACCAATGAAAATTTTAACTTGAAGACCAAACAGCTGAAGAAAcccaaacaaacagaaagacgCTCAAATACCTTTCAAAAAACACCAGAATCTCCTTCAAAACCGGTTTTCGGGAGTCAAGAGCTCATCTAGAGAGGGCGATGGTGTTACAGGTTTTCACTTACCAATAGACCACTGTACATAAAGCTTAGAGCTGGTCTGAAGCTTGCGAAACGCTGAGTGGGTGACTCTAATTGCAGAAGAACACCCCTGCTAAAATACAATACAGTCCAACTGTGAAATCTAACTTCATACAATAGGTGGCCCTCCATGACAGGACTGCCTCTGTTCATTTGGGAAGGGGGTTGTGGGATAAGCGTAGGGATCCAGATGAAGCGGGGTCAGCAGGGGCCACTCCGTGGATCACCGGTGCATGGGCCTCAGGGGCTCTGTGGCTGTGGCAGCATCTGGAAACAGGTTATGGTACGTAGGGAGAGGCACGTAGGCAGCTGTGATCATTTTA
>TU96322
GCTGCATCATTCCACAAACAGACAGCTGTTCGCTAACGGAGAGAGTCTGTACTACCTTTTTAGCCAGGAAACATGCCATTTTACATCATGTACCCTGGGAAAGTTGGAATATTGCCTATGGCTGAGCTGGTTCATTCTGGTATTGGAAGAAAAGGTTTGGCTTTAGCTGCTCAGAGCTGAACTATGCTTTGCGAGGCAGACTCCCAAGGTTTCAGCGCAGTTCAAATAAAGCACATTAACTGGCTATGCAAGGTTCTtcattaattttaacaaaaaagaaacattaaggTCCAATGGCAAAAACCTTACCAGACAACAGTTGTTTAAAGTGACTGTCAAgttcatgcaaatatttaaatcctGCAATACACTCGCCCCCATGTGATTCCAAACCAGCATagtttatgaatttattttttacatatgatATTTTAGACAGTGATGGTAACCAAACAGCATTGATGATTCaagaaatgaatttaaatattttaatcaaaatatagtcagtcaggtttggaacaacattaaaGCGAGTAAATTAAGAAATCTACTCAAATTAaggaattatttctttaatataaacactccaataaactacattttaaaacatctccCTCTAGAGGCGCTCTGCTCTTAATAAATCCCTTCATAACGGCATGAAAGCAAACACAGAACTCAAGTTTTACACAGTGTTGTGAAAGTCATTTAATCAGTAGAagattttagaaaaatcaaTCCTTGATTATGAAAAGTTATAAATTCAAAGATGTTTTAGAAAGCTAAATAGCTCAAGTAGACTctccagaaaaaaacaaaacaaaaaaaaaaaaaaaaaaaaaactcttttttggTTGCCTTTTGTtgcttaaaaatgaagaaacaaaggATAATGAACCAGCAGTTCACAACACAATGTCCGTCATGGAAAGATGAAGACCAATGAAAATTTTAACTTGAAGACCAAACAGCTGAAGAAAcccaaacaaacagaaagacgCTCAAATACCTTTCAAAAAACACCAGAATCTCCTTCAAAACCGGTTTTCGGGAGTCAAGAGCTCATCTAGAGAGGGCGATGGTGTTACAGGTTTTCACTTACCAATAGACCACTGTACATAAAGCTTAGAGCTGGTCTGAAGCTTGCGAAACGCTGAGTGGGTGACTCTAATTGCAGAAGAACACCCCTGCTAAAATACAATACAGTCCAACTGTGAAATCTAACTTCATACAATAGGTGGCCCTCCATGACAGGACTGCCTCTGTTCATTTGGGAAGGGGGTTGTGGGATAAGCGTAGGGATCCAGATGAAGCGGGGTCAGCAGGGGCCACTCCGTGGATCACCGGTGCATGGGCCTCAGGGGCTCTGTGGCTGTGGCAGCATCTGGAAACAGGTTATGGTACGTAGGGAGAGGCACGTAGGCAGCTGTGATCATTTTA
>TU96324
acaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaactcttttttggTTGCCTTTTGTtgcttaaaaatgaagaaacaaaggATAATGAACCAGCAGTTCACAACACAATGTCCGTCATGGAAAGATGAAGACCAATGAAAATTTTAACTTGAAGACCAAACAGCTGAAGAAAcccaaacaaacagaaagacgCTCAAATACCTTTCAAAAAACACCAGAATCTCCTTCAAAACCGGTTTTCGGGAGTCAAGAGCTCATCTAGAGAGGGCGATGGTGTTACAGGTTTTCACTTACCAATAGACCACTGTACATAAAGCTTAGAGCTGGTCTGAAGCTTGCGAAACGCTGAGTGGGTGACTCTAATTGCAGAAGAACACCCCTGCTAAAATACAATACAGTCCAACTGTGAAATCTAACTTCATACAATAGGTGGCCCTCCATGACAGGACTGCCTCTGTTCATTTGGGAAGGGGGTTGTGGGATAAGCGTAGGGATCCAGATGAAGCGGGGTCAGCAGGGGCCACTCCGTGGATCACCGGTGCATGGGCCTCAGGGGCTCTGTGGCTGTGGCAGCATCTGGAAACAGGTTATGGTACGTAGGGAGAGGCACGTAGGCAGCTGTGATCATTTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU96318 True 2445 lncRNA 0.39 2 19479578 19482043
TU96319 False 1436 lncRNA 0.39 2 19480587 19482043
TU96320 False 641 lncRNA 0.43 2 19405656 19482043
TU96322 False 1437 lncRNA 0.39 2 19480587 19482043
TU96324 False 637 lncRNA 0.43 2 19461218 19482043

Neighbor

gene id symbol gene type direction distance location
iqsec2b iqsec2,LOC107747221,LOC107683900,LOC107702804,LOC107570507,LOC107550910,LOC107725888 coding upstream 172 19347902 ~ 19405484 (+)
LOC122349946 LOC107747205,LOC107683889,LOC556872 coding upstream 59081 19284717 ~ 19346575 (+)
pold2 pold2,LOC107747204 coding upstream 134786 19267352 ~ 19270870 (+)
sf3a1 sf3a1,LOC107550953,LOC107564451 coding upstream 138551 19261941 ~ 19267105 (+)
slc7a4 slc7a4,LOC106579925 coding upstream 149544 19249721 ~ 19256112 (+)
mapkapk2b mapkapk2b,LOC107683909,LOC107550950,LOC107726784,LOC107747217,LOC107576554 coding downstream 85236 19567279 ~ 19571233 (+)
fmodb fmodb,LOC107683908,LOC107747218,LOC107726688,LOC107575999,LOC107702840 coding downstream 90268 19572311 ~ 19577890 (+)
LOC122350022 NA coding downstream 100269 19582312 ~ 19583244 (+)
LOC122350024 LOC107683897,LOC107735514 coding downstream 107541 19589584 ~ 19590513 (+)
LOC122350025 LOC107683897,LOC107735514 coding downstream 114535 19596578 ~ 19600117 (+)
G65108 NA non-coding upstream 58612 19183690 ~ 19347044 (+)
G65073 LOC107564452,LOC107733255,LOC107755688,LOC107702821,LOC107733264,LOC107668424,LOC553487,LOC107564453 non-coding upstream 171056 19011933 ~ 19234600 (+)
G65074 NA non-coding upstream 172272 19224569 ~ 19233384 (+)
G65094 NA non-coding upstream 193531 19049282 ~ 19212125 (+)
G64910 NA non-coding upstream 731312 18673967 ~ 18674344 (+)
G65267 NA non-coding downstream 75501 19557544 ~ 19558486 (+)
G65268 NA non-coding downstream 76830 19558873 ~ 19559169 (+)
G65284 NA non-coding downstream 212337 19694380 ~ 19752601 (+)
G65295 rab11fip1,LOC107579780,LOC107683894,LOC107724309,LOC107565115,LOC107740979 non-coding downstream 277427 19759470 ~ 19780752 (+)
G65361 NA non-coding downstream 458064 19940107 ~ 19940869 (+)
pqbp1 pqbp1,LOC107702814,LOC107683912,LOC107747222 other upstream 131886 19272092 ~ 19273770 (+)
LOC122350733 LOC107702875,LOC107722994,LOC107591954,LOC107573969,LOC107722996,LOC107691581 other upstream 203969 19199988 ~ 19201687 (+)
G65105 LOC107747205,LOC107550912,LOC107683889,LOC108412149 other upstream 253351 19119944 ~ 19152305 (+)
G65100 sf3a1,LOC107564451,LOC107550953 other upstream 309585 19094947 ~ 19096071 (+)
si:ch211-158d24.2 si:ch211-158d24.2,LOC107550960,LOC107703181,LOC107676623,LOC107728434,LOC107571139,LOC107753137 other upstream 683410 18695454 ~ 18722246 (+)
rfk rfk,LOC107740987,LOC107723557 other downstream 547991 20030034 ~ 20033607 (+)
timm17b timm17b,LOC107722912 other downstream 653076 20135119 ~ 20139364 (+)
LOC122350816 slc18a1,LOC107702874,LOC107722997,LOC107591929,LOC107756821,LOC107566956 other downstream 941238 20423281 ~ 20431832 (+)
rnf122 si:ch1073-392o20.1,rnf122,LOC107747807,LOC107678386,LOC107698113,LOC108440685,LOC107563167 other downstream 1476557 20958600 ~ 20972040 (+)
ankrd39 LOC107721080,LOC107678427,LOC107559444 other downstream 1720405 21202448 ~ 21204346 (+)

Expression


Co-expression Network