G65244


Basic Information

Item Value
gene id G65244
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 19406755 ~ 19409040 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU96496
CGGTGGTGGGCGAATCTTGCATATTCCAGACTTTTCTGCTATTGGACGGATTTTGGCGATATATCCCAGAGGATCAGCAAACTCCTCCCACGACGGTTCAAACACTGGACATTCCGGCGGCGGAACAAACTCCTCCCCTCCATCCATcgctctTTTTTTGCACTCGGTCTGAGTTCTTCTTGTTCTTCGGAGTCGCCTCGGACCGATTAGCGCACCGGGGGGGTTTATTATTTGTCTTTCTGAGTCTCGTTTGATGATCACGGGGTCTATTGTTCGGTGGAGGGTCAGTCTCTGGGTGGCAGTGGCTCTGCGGCCTCCTCGATCAGCCCATCCCagcatacacactcacacatacacactctctcggTCGGCTAGAGGGATGTTTAGTCGCGGGGGTCTTCTTTCCAACGGACTCCTGAAAGTCCCGCGTAAGTTGACGTTTTTTCTGTATAACGGTCGTTTCGCGCGCGTGAACAAAATACACCTTGTTtccaatgttttcttttctcgtCTCCTATCCACCGTTCATCCTGTCTGAACTACACGCCATCTTGGTTTCATC

Function

GO: NA

KEGG:

id description
ko03040 Spliceosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU96496 True 562 lncRNA 0.51 2 19406755 19409040

Neighbor

gene id symbol gene type direction distance location
gpkow gpkow,LOC107683890,LOC107702823,LOC107575438 coding downstream 123314 19274956 ~ 19283441 (-)
ccdc157 ccdc157 coding downstream 144930 19257900 ~ 19261825 (-)
LOC122349957 LOC107668424,LOC107564453 coding downstream 172098 19232671 ~ 19234657 (-)
LOC122349953 LOC107564452 coding downstream 176885 19225286 ~ 19229870 (-)
LOC122349956 LOC107564454 coding downstream 188120 19216045 ~ 19218635 (-)
LOC122350099 renbp,LOC107747208,LOC107683888,LOC107702837,LOC107725049 coding upstream 14952 19423992 ~ 19428532 (-)
zgc:162200 zgc:162200,LOC107683887,LOC107702829,LOC107747207,LOC107724826,LOC107570514,LOC107550908 coding upstream 24989 19434029 ~ 19449741 (-)
rbm39b rbm39b,LOC107683885,LOC107747212,LOC107550952,LOC107570509,LOC107725799 coding upstream 72227 19481267 ~ 19492499 (-)
rh50 rh50,LOC107724755,LOC107570510,LOC107702833,LOC107683883,LOC107550951,LOC107747214 coding upstream 85097 19494137 ~ 19499408 (-)
slc12a5b slc12a5b,LOC107550951,LOC107747216,LOC107683884,LOC107702850,LOC107725712 coding upstream 90517 19499557 ~ 19544031 (-)
G65201 NA non-coding downstream 138565 19100929 ~ 19268190 (-)
G65199 NA non-coding downstream 139650 19099533 ~ 19267105 (-)
G65217 sf3a1,LOC106585510 non-coding downstream 143450 19262737 ~ 19263305 (-)
G65180 NA non-coding downstream 149725 19086572 ~ 19257030 (-)
G65194 slc7a4 non-coding downstream 156071 19081648 ~ 19250684 (-)
LOC122349935 NA non-coding upstream 299057 19708097 ~ 19744650 (-)
G65596 adamts13,LOC107725310,LOC107548275,LOC107702807 non-coding upstream 694297 20103337 ~ 20104000 (-)
LOC122350956 NA non-coding upstream 727563 20136603 ~ 20140200 (-)
G65613 LOC107756819,LOC107723069,LOC107578151,LOC107571958 non-coding upstream 757016 20166056 ~ 20166372 (-)
LOC122350542 rsph14,LOC107756838,LOC107691565,LOC107702819,LOC107723028 non-coding upstream 872542 20281582 ~ 20284840 (-)
LOC122351133 NA other downstream 204378 19202277 ~ 19202377 (-)
LOC122350102 LOC107717958,LOC107676625,LOC107550916,LOC107682323,LOC107659265 other downstream 358786 19023713 ~ 19047969 (-)
G65033 NA other downstream 846421 18559667 ~ 18560334 (-)
tbc1d10aa tbc1d10aa,LOC107657331,LOC107712481,LOC107550973,LOC107753095,LOC107703173,LOC107554420 other downstream 1004817 18390663 ~ 18401938 (-)
G64967 NA other downstream 1249212 18155135 ~ 18157543 (-)
si:ch211-218o21.4 si:ch211-218o21.4,LOC107550930,LOC107702847,LOC107727198,LOC107747209,LOC107683911 other upstream 19698 19428738 ~ 19433291 (-)
zgc:154046 adamts13,zgc:154046,LOC107702807,LOC107548275,LOC107722731,LOC107702859,LOC108426726,LOC108265337,LOC107740996,LOC107565124,LOC107691587 other upstream 708967 20118007 ~ 20134345 (-)
LOC122350560 ppia,LOC107566959,LOC107756826,LOC107722982,LOC107591936,LOC107691583 other upstream 1006025 20415065 ~ 20421296 (-)
LOC122350336 LOC107714596,LOC107556216,LOC107698089 other upstream 1309900 20718940 ~ 20723155 (-)
gna14a gna14a,gna14,LOC107698092,LOC107678467,LOC107556222,LOC107721075,LOC108426707,LOC108265545 other upstream 1605953 21014993 ~ 21025831 (-)

Expression


Co-expression Network