LOC122350768 (LOC107710831,LOC107553156,LOC107562655,LOC107678394)


Basic Information

Item Value
gene id LOC122350768
gene name LOC107710831,LOC107553156,LOC107562655,LOC107678394
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 21963465 ~ 21964563 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU97627
TCGACAAATGAATCATTAACATCCTGCTCCACCTTCCTCACTTAAATACAAGCGTTGCGGTTTTGATTTCATATAGTCAAATAACTGTCGGCGTAAACATGAGGTCGGTGGTTCTGGGTTTGTTTCTGTGCGCTCTCCTCTCTCTCGTCAACGCTGCATGCTTCGTTAAGCAACACAAAACATCAGTTAAGTTTTGCCAGGATACGACGGATAAGACGTGGCATCCTACTGGATCTGTTTGGAGAAACAGTAAATGCTTCGACTGTAATTGTTCCGCTGATTCCATGAGTTGCTGTGACGTAATGGAGAGGCCTGTTAATTATCCGGACAAGTGCCAAGTGGAGTACGATTACACTACATGCACGTATGAACTATTTGAGAAAGTGCCCTGTTCTGCCTCGGGTGTTGTTCTCGGGAAATGACGGCCATGAATCATGAAAAGGAAGGCATCTTCACTGTAtcgtttgaaaataaatatataaataa
>XM_043247466.1
AATCAGTattcaataacaataataatgtaatcaGCGTCTCCAGAATCATTCGACAAATGAATCATTAACATCCTGCTCCACCTTCCTCACTTAAATACAAGCGTTGCGGTTTTGATTTCATATAGTCAAATAACTGTCGGCGTAAACATGAGGTCGGTGGTTCTGGGTTTGTTTCTGTGCGCTCTCCTCTCTCTCGTCAACGCTGCATGCTTCGTTAAGCAACACAAAACATCAGTTAAGTTTTGCCAGGATACGACGGATAAGACGTGGCATCCTACTGGATCTGTTTGGAGAAACAGTAAATGCTTCGACTGTAATTGTTCCGCTGATTCCATGAGTTGCTGTGACGTAATGGAGAGGCCTGTTAATTATCCGGACAAGTGCCAAGTGGAGTACGATTACACTACATGCACGTATGAACTATTTGAGAAAGTGCCCTGTTCTGCCTCGGGTGTTGTTCTCGGGAAATGACGGCCATGAATCATGAAAAGGAAGGCATCTTCACTGTAtcgtttgaaaataaatatataaataaattaa

Function

NR:

description
PREDICTED: beta-microseminoprotein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU97627 False 486 TUCP 0.43 4 21963514 21964558
XM_043247466.1 True 540 mRNA 0.41 4 21963465 21964563

Neighbor

gene id symbol gene type direction distance location
LOC122351030 NA coding upstream 3566 21950079 ~ 21959899 (+)
LOC122351029 NA coding upstream 3566 21957781 ~ 21959899 (+)
si:ch211-198o12.4 LOC107710821,LOC107553123,LOC107661345 coding upstream 14902 21944819 ~ 21948563 (+)
disp3 disp3,LOC107661343,LOC107728359,LOC107678372,LOC107710822 coding upstream 111690 21803124 ~ 21851775 (+)
si:dkey-32e23.4 si:dkey-32e23.4,LOC107710834,LOC107665195,LOC107562650,LOC107678420,LOC103036512 coding upstream 175715 21764151 ~ 21787750 (+)
LOC122350739 antxrl,antxr1a,LOC107661337,LOC107710819,LOC108265351,LOC107562635 coding downstream 511 21965074 ~ 22007156 (+)
agtpbp1 agtpbp1,LOC107757430,LOC107752548,LOC107562637,LOC107678371 coding downstream 326188 22290751 ~ 22318814 (+)
hnrnpk hnrnpk,LOC107757432,LOC107752553,LOC107678442 coding downstream 406159 22370722 ~ 22378446 (+)
c8h9orf64 zgc:136564,cunh9orf64,c5h9orf64,LOC107757431,LOC107664574,LOC107553132 coding downstream 414840 22379403 ~ 22382744 (+)
gkap1 gkap1,LOC107664507,LOC107678454,LOC107553117 coding downstream 420640 22385203 ~ 22394002 (+)
G65959 NA non-coding upstream 218247 21744834 ~ 21745218 (+)
G65958 NA non-coding upstream 218786 21744475 ~ 21744679 (+)
G65957 NA non-coding upstream 219088 21744089 ~ 21744377 (+)
G65955 NA non-coding upstream 223546 21739676 ~ 21739919 (+)
G65954 NA non-coding upstream 227110 21736032 ~ 21736355 (+)
G65998 NA non-coding downstream 46086 22010649 ~ 22243293 (+)
G66013 NA non-coding downstream 188725 22153288 ~ 22157512 (+)
G66014 gfpt1,LOC107678434,LOC107752562,LOC107562636,LOC107710818,LOC107553119 non-coding downstream 206076 22170639 ~ 22175064 (+)
G66022 NA non-coding downstream 319171 22283734 ~ 22285432 (+)
G66024 NA non-coding downstream 323745 22288308 ~ 22288847 (+)
G65995 NA other upstream 1620 21949888 ~ 21961845 (+)
G65992 LOC107553157,LOC107661339 other upstream 22541 21939146 ~ 21940924 (+)
b2ml LOC107562648,LOC107710837,LOC107665198,LOC107728367 other upstream 208745 21751762 ~ 21754720 (+)
LOC122350761 rhobtb2,LOC107553166,LOC107678456,LOC107718938,LOC107665202,LOC107710844 other upstream 424479 21469990 ~ 21538986 (+)
slc25a37 slc25a37,LOC107710846,LOC107747712,LOC107559458,LOC107678377 other upstream 588840 21359237 ~ 21374625 (+)
G66010 naa35,LOC107757435,LOC107752550 other downstream 151720 22116283 ~ 22117834 (+)
G66011 naa35,LOC107752550,LOC107757435 other downstream 155350 22119913 ~ 22120796 (+)
LOC122350000 ddx51 other downstream 567905 22532468 ~ 22540233 (+)
mfsd2al2 NA other downstream 750816 22715379 ~ 22723908 (+)
fkbp1aa fkbp1aa,fkb1b,fkbp1a,LOC107574256,LOC107553142,LOC103030299,LOC107752559,LOC100705189 other downstream 760019 22724582 ~ 22727444 (+)

Expression


Co-expression Network