G66022


Basic Information

Item Value
gene id G66022
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 22283734 ~ 22285432 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU97672
AGCAGCTTCATTACAACAATATTGGGTTTGGCCACTTTAAGGATGCGGTTCACCTACAACAAGAGTCAGCATCTCAGTCCTTTcctttacaatatattattaacaatgtAAGCACTTAATCATTTAATAGGAATAATCTGACTTGCATGCTTCAATTCCaaatgctttgatttgaatattcaaataacaattgtgttttaataaaaaaaaagctacaccACAGGCTTGTTTAACAGCTCTCTCTTTACACACAGACACCCAaccatttagaatttttttactttgttcaaCCAAGAAccctaaataaaatattgtttccacaaatatattaagcagcacaaccgttttAACACCGAGAACGATAAGATCAGTTTCATACTCATCCATCCTAGAAGATTGGAAAGTTTCCCTTTGGCGTATAAGAAGAGTTTGTACCTCTGCATCAGGGCTGGTGACGTTTTCAAGTATGAGTTTGGCCTGCTGGAAATGTTTACTGGCTGCCATATAGAGATCCGCTGAGCGAGGGGGAGGATTGTActtcttcttcttgctcTTCTTGCTGCTTCGTACTTTCAGCTGCTCCTCCAGGATTCTCTCCTCTGCCATCTGAGAGCTGTCCGCTCGACTCAACGTGGACATGAGCCACGCATACAGAAACTCCGACAGATACCTTAGATGTAGTAATACTCGTGCATGCTGTAGAGCTCCAGCTCAAAGCCGCTGAGCAGGTACTGGATCATGATGCGCAGGTTGTGATAGAGGATCCACGTGCCCAGACAGGCTAAATGCTGCCTCTGAGGCTCAAGCTTCATCAAGAGGCCGTGAAGAGCAGCATCCACCTTCTCGgcctgaacaacaacaacaacaacaacaaccaacaCGCTCAATGATGCCTTA

Function

GO: NA

KEGG:

id description
ko04710 Circadian rhythm

RNA

RNA id representative length rna type GC content exon number start site end site
TU97672 True 897 lncRNA 0.43 3 22283734 22285432

Neighbor

gene id symbol gene type direction distance location
LOC122350739 antxrl,antxr1a,LOC107661337,LOC107710819,LOC108265351,LOC107562635 coding upstream 276578 21965074 ~ 22007156 (+)
LOC122351030 NA coding upstream 323835 21950079 ~ 21959899 (+)
LOC122351029 NA coding upstream 323835 21957781 ~ 21959899 (+)
si:ch211-198o12.4 LOC107710821,LOC107553123,LOC107661345 coding upstream 335171 21944819 ~ 21948563 (+)
disp3 disp3,LOC107661343,LOC107728359,LOC107678372,LOC107710822 coding upstream 431959 21803124 ~ 21851775 (+)
agtpbp1 agtpbp1,LOC107757430,LOC107752548,LOC107562637,LOC107678371 coding downstream 5319 22290751 ~ 22318814 (+)
hnrnpk hnrnpk,LOC107757432,LOC107752553,LOC107678442 coding downstream 85290 22370722 ~ 22378446 (+)
c8h9orf64 zgc:136564,cunh9orf64,c5h9orf64,LOC107757431,LOC107664574,LOC107553132 coding downstream 93971 22379403 ~ 22382744 (+)
gkap1 gkap1,LOC107664507,LOC107678454,LOC107553117 coding downstream 99771 22385203 ~ 22394002 (+)
frmd3 frmd3,LOC107678471 coding downstream 109715 22395147 ~ 22438371 (+)
G65998 NA non-coding upstream 40441 22010649 ~ 22243293 (+)
G66014 gfpt1,LOC107678434,LOC107752562,LOC107562636,LOC107710818,LOC107553119 non-coding upstream 108670 22170639 ~ 22175064 (+)
G66013 NA non-coding upstream 126222 22153288 ~ 22157512 (+)
G65959 NA non-coding upstream 538516 21744834 ~ 21745218 (+)
G65958 NA non-coding upstream 539055 21744475 ~ 21744679 (+)
G66024 NA non-coding downstream 2876 22288308 ~ 22288847 (+)
G66183 NA non-coding downstream 226747 22512179 ~ 22513245 (+)
G66189 NA non-coding downstream 244821 22530253 ~ 22531750 (+)
G66261 NA non-coding downstream 514207 22799639 ~ 22800154 (+)
LOC122350789 NA non-coding downstream 624215 22909647 ~ 22911382 (+)
G66011 naa35,LOC107752550,LOC107757435 other upstream 162938 22119913 ~ 22120796 (+)
G66010 naa35,LOC107757435,LOC107752550 other upstream 165900 22116283 ~ 22117834 (+)
LOC122350768 LOC107710831,LOC107553156,LOC107562655,LOC107678394 other upstream 319171 21963465 ~ 21964563 (+)
G65995 NA other upstream 321889 21949888 ~ 21961845 (+)
G65992 LOC107553157,LOC107661339 other upstream 342810 21939146 ~ 21940924 (+)
LOC122350000 ddx51 other downstream 247036 22532468 ~ 22540233 (+)
mfsd2al2 NA other downstream 429947 22715379 ~ 22723908 (+)
fkbp1aa fkbp1aa,fkb1b,fkbp1a,LOC107574256,LOC107553142,LOC103030299,LOC107752559,LOC100705189 other downstream 439150 22724582 ~ 22727444 (+)
wrap73 LOC107748967,LOC107698846,LOC107595759,LOC107678416,LOC107602469,LOC107710786 other downstream 614004 22899436 ~ 22925768 (+)
mfn2 mfn2,LOC107748965,LOC107602467,LOC107710790,LOC107678429,LOC107698839,LOC107595787 other downstream 688563 22973995 ~ 22987162 (+)

Expression


Co-expression Network