G66116 (gfpt1,LOC107710818,LOC107678434,LOC107562636,LOC107553119,LOC107752562,LOC108426669,LOC103362312,LOC101170101)


Basic Information

Item Value
gene id G66116
gene name gfpt1,LOC107710818,LOC107678434,LOC107562636,LOC107553119,LOC107752562,LOC108426669,LOC103362312,LOC101170101
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 22028732 ~ 22031993 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU97791
CTATGACTCCGCTGGTGTGGGCATCGATGGAGGAAACAGTAAGGAATGGGAAAACAACTGCAAGAACATCCACCTGATCAAGCAAACAGGAAAAGTCAAAGCGCTGGATGAGGAAATCAATAGGCAGCAGGATGTTGATCTGGATGTGGAGTTCGACGTGCACCTGGGAATCGCTCACACTCGATGGGCCACTCACGGCGTCCCCAGCCCCGTCAACAGCCACCCGCAAAGATCTGACAAGAACAACGAGTTTATTGTCATCCATAATGGAATCATCACCAACTACAAAGACTTGAAGAAGTTTCTGGAGAGTAAAGGCTATGACTTTGAGTCTGAGACGGACACGGAGACCATCGCTAAGCTGGTGAAGTACATGTATGACAACCGGGAGAACGATGACATCACCTTCGCCACCCTGGTGGAGCAAGTCACCCAGCAACTAGAAGGAGCTTTTGCCCTGGTCTTCAAAAGTGTGCACTATCCAGGAGAGGCAGTGGGCAGCAGGAGAGGAGGTCCGTTACTGATTGGAGTTAGAAGTGACCACAAGCTTTCCACAGATCACATCCCCATCCTGTATCGCTCCTCTGGTAAAGACAAAAAGAGCTGCAATACTCTGCCCAGGATGGACGAGGACACGTGTCTGTTTCCTGTGGACGAGAAAGCCGTGGAGTACTACTTTGCATCTGATGCCAGTGCTGTCATCGAGCACACCAATCGAGTCATCTTCCTCGAGGATGACGATATCGCAGCGGTGCGTGACGGGCGTCTCTCCATCCACCGGATCAAGCGGACGGCAGGAGATCACCCGGCCCGGGCCATCCAGACCCTGCAGATGGAGCT

Function

symbol description
gfpt1 Predicted to enable glutamine-fructose-6-phosphate transaminase (isomerizing) activity. Acts upstream of or within several processes, including melanocyte differentiation; neuromuscular junction development; and skeletal system development. Is expressed in notochord and polster. Human ortholog(s) of this gene implicated in congenital myasthenic syndrome 12 and obesity. Orthologous to human GFPT1 (glutamine--fructose-6-phosphate transaminase 1).

NR:

description
PREDICTED: glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU97791 True 840 TUCP 0.52 8 22028732 22031993

Neighbor

gene id symbol gene type direction distance location
kansl3 kansl3,LOC107678435,LOC107661339,LOC107710832 coding downstream 85315 21923712 ~ 21943417 (-)
bmp1a bmp1a,LOC107710833,LOC107661342,LOC107678424,LOC108426680 coding downstream 109054 21855648 ~ 21919678 (-)
rab7b LOC107678421,LOC107562649,LOC107553159,LOC107728368,LOC103037223 coding downstream 263227 21757675 ~ 21765505 (-)
prkg1l LOC107553164,LOC107710842,LOC107678373,LOC107562631,LOC107665193,LOC107716608,LOC107728357 coding downstream 277052 21730654 ~ 21751680 (-)
acsl2 acsl2,LOC107710839,LOC107665192,LOC107553163,LOC107716609,LOC107678403,LOC108426687 coding downstream 299515 21697808 ~ 21729217 (-)
LOC122350992 LOC107756834,LOC107691567,LOC107548280,LOC107702864 coding upstream 8078 22040071 ~ 22054375 (-)
LOC122349886 NA coding upstream 113530 22145523 ~ 22146997 (-)
LOC122349876 NA coding upstream 127993 22159986 ~ 22161558 (-)
naa35 naa35,LOC107757435,LOC107752550 coding upstream 251356 22283349 ~ 22290847 (-)
ntrk2a ntrk2,ntrk2a,LOC107752549,LOC107757434,LOC107678451 coding upstream 292793 22324786 ~ 22364823 (-)
G66115 NA non-coding downstream 15054 22010643 ~ 22013678 (-)
G66071 NA non-coding downstream 275117 21751768 ~ 21753615 (-)
G66046 NA non-coding downstream 384049 21571117 ~ 21644683 (-)
G66047 NA non-coding downstream 390384 21603675 ~ 21638348 (-)
G65871 NA non-coding downstream 654141 21373243 ~ 21374591 (-)
LOC122350974 NA non-coding upstream 41694 22073687 ~ 22074471 (-)
G66131 NA non-coding upstream 261446 22293439 ~ 22295953 (-)
G66143 NA non-coding upstream 332908 22364901 ~ 22365113 (-)
G66142 NA non-coding upstream 333283 22365276 ~ 22365682 (-)
G66147 NA non-coding upstream 344917 22376910 ~ 22378639 (-)
G66119 gfpt1,LOC107710818,LOC107752562,LOC107678434,LOC102792631 other downstream 2941 22013973 ~ 22025791 (-)
G66086 si:dkey-32e23.4,LOC107678420,LOC107562650,LOC107728358,LOC107710834 other downstream 252112 21771468 ~ 21776620 (-)
gna14a gna14a,gna14,LOC107698092,LOC107678467,LOC107556222,LOC107721075,LOC108426707,LOC108265545 other downstream 1002901 21014993 ~ 21025831 (-)
LOC122350336 LOC107714596,LOC107556216,LOC107698089 other downstream 1305577 20718940 ~ 20723155 (-)
LOC122350560 ppia,LOC107566959,LOC107756826,LOC107722982,LOC107591936,LOC107691583 other downstream 1607436 20415065 ~ 20421296 (-)
LOC122350973 dmtn,LOC107586118,LOC107687659,LOC107720576,LOC107553712,LOC107705088,LOC107571963,LOC107702870,LOC107723027 other upstream 28022 22060015 ~ 22068757 (-)
antxr1a antxrl,antxr1a,antxr1,LOC107661337,LOC107710819,LOC107562635,LOC108265351 other upstream 43017 22075010 ~ 22110087 (-)
gfpt1 gfpt1,LOC107678434,LOC107553119,LOC108426669,LOC107710818,LOC107752562,LOC103362312,LOC101170101,LOC107562636 other upstream 211209 22243202 ~ 22265861 (-)
LOC122349902 nfu1,LOC107678441,LOC107553147,LOC107664472,LOC107570003 other upstream 605282 22637275 ~ 22640323 (-)
LOC122350259 LOC107678445,LOC107752560,LOC101882811,LOC107553112,LOC107757078,LOC108426735,LOC107703990,LOC107757081,LOC107553140,LOC107678447,LOC107752570 other upstream 695187 22727180 ~ 22747079 (-)

Expression


Co-expression Network