G66235 (LOC107703993,LOC107755595)


Basic Information

Item Value
gene id G66235
gene name LOC107703993,LOC107755595
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 22699448 ~ 22705125 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU97992
GGCACTTCAGTGCAGAAGCGCAACTTGTGTCCGAGACTTCCCTCAACTTCCTCTCCGTCTTCCTCCTgctcctcatcctcttcctctcttctcTGTGTCTCCAGCCGCTCCTCTTCCTCCCACTCTTCCTCTTCCACTGAATAGCTGCAGCTGATTGGCTCCCTGAAGCTGACCCTGGCGGTGCCGCTCCGGACCGGTGCTGCAGGGGCGTCCTCTGCTTCGGCGACGGGAGCCGGCGAATCAGACGGGTCGAAGAAAACCGGGGGCGGAGGCGGCGGGAAGGAGTCGGAGTCATTCAGTTCATCGAGCGCATCGGAAGGCTCCGGCTGAGACGAAATTCCTACGACAGAGCATACATACAGCTTGAGTCGACATGGCTTCCCTGAATGCGACTCTGTAGAACCCAGGCGTACCTGCACAGCTGTCGTTCCCACAATCCTTTGCGGTGGAAGTCCCTCGAGACGTGCAGCTCGGCGGGAAAGGGCCGAATTCTGCGTATCCGTTCAGCTCCACGGTGAACTCCAGACTGTCCGGCTGTTGGTTCGTTTGCGGCGTGCTGATGCCCGATTGGTCCTTGCGAACGAATGCTGCCCTGTCATTGGCTGCTGGACAGGGCTGAGTGCGTTGTGTGTGTTCATACGCTGGAGGCTGGCCGTTCGGTATAGGATGGAGCGTGTGAACA

Function

NR:

description
PREDICTED: prickle-like protein 2 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU97992 True 682 lncRNA 0.59 2 22699448 22705125

Neighbor

gene id symbol gene type direction distance location
LOC122350076 LOC107748967,LOC107595759,LOC107698846,LOC107678416,LOC107602469,LOC107710786 coding downstream 70889 22625423 ~ 22628559 (-)
LOC122349924 nfu1,LOC107664472,LOC107678441,LOC107553147,LOC107570003,LOC101170349 coding downstream 184413 22511952 ~ 22515035 (-)
rasef rasef,LOC107678388,LOC107752555,LOC107755592,LOC107562642 coding downstream 242179 22438470 ~ 22457269 (-)
rmi1 rmi1 coding downstream 328831 22366400 ~ 22370617 (-)
ntrk2a ntrk2,ntrk2a,LOC107752549,LOC107757434,LOC107678451 coding downstream 334625 22324786 ~ 22364823 (-)
LOC122350258 LOC107757082,LOC107757083,LOC107752574,LOC107757080,LOC107678397,LOC107575601,LOC107703982,LOC107752571 coding upstream 43420 22748545 ~ 22756185 (-)
LOC122351034 LOC107552255 coding upstream 52651 22757776 ~ 22760114 (-)
LOC122350037 LOC107575601,LOC107757083,LOC107574252,LOC107752574,LOC107678367,LOC107678397,LOC107752571,LOC107552256,LOC107703982 coding upstream 74129 22779254 ~ 22790487 (-)
LOC122351014 LOC107757082,LOC107703982,LOC107757083,LOC107757080,LOC107678397 coding upstream 107730 22812855 ~ 22816347 (-)
LOC122349927 LOC107710781,LOC107748971,LOC107678464,LOC107698851 coding upstream 113844 22818969 ~ 22824591 (-)
G66217 LOC107664463,LOC107755600 non-coding downstream 41789 22654971 ~ 22657659 (-)
G66207 NA non-coding downstream 74271 22580402 ~ 22625177 (-)
G66206 NA non-coding downstream 150130 22547651 ~ 22549318 (-)
G66163 gkap1,LOC107562640,LOC107757429,LOC107664507,LOC107678454,LOC107553117 non-coding downstream 311665 22386082 ~ 22387783 (-)
G66147 NA non-coding downstream 320809 22376910 ~ 22378639 (-)
G66337 NA non-coding upstream 277586 22982711 ~ 22983165 (-)
G66339 NA non-coding upstream 280221 22985346 ~ 22986961 (-)
LOC122350914 NA non-coding upstream 346757 23051882 ~ 23054592 (-)
G66368 NA non-coding upstream 535847 23240972 ~ 23245510 (-)
G66372 prdm16 non-coding upstream 678013 23383138 ~ 23383354 (-)
LOC122349902 nfu1,LOC107678441,LOC107553147,LOC107664472,LOC107570003 other downstream 59125 22637275 ~ 22640323 (-)
gfpt1 gfpt1,LOC107678434,LOC107553119,LOC108426669,LOC107710818,LOC107752562,LOC103362312,LOC101170101,LOC107562636 other downstream 433587 22243202 ~ 22265861 (-)
antxr1a antxrl,antxr1a,antxr1,LOC107661337,LOC107710819,LOC107562635,LOC108265351 other downstream 589361 22075010 ~ 22110087 (-)
LOC122350973 dmtn,LOC107586118,LOC107687659,LOC107720576,LOC107553712,LOC107705088,LOC107571963,LOC107702870,LOC107723027 other downstream 630691 22060015 ~ 22068757 (-)
G66116 gfpt1,LOC107710818,LOC107678434,LOC107562636,LOC107553119,LOC107752562,LOC108426669,LOC103362312,LOC101170101 other downstream 667455 22028732 ~ 22031993 (-)
LOC122350259 LOC107678445,LOC107752560,LOC101882811,LOC107553112,LOC107757078,LOC108426735,LOC107703990,LOC107757081,LOC107553140,LOC107678447,LOC107752570 other upstream 22055 22727180 ~ 22747079 (-)
G66310 NA other upstream 90497 22795622 ~ 22796362 (-)
ddx51 ddx51 other upstream 124079 22829204 ~ 22835591 (-)
tprg1l tprg1l,LOC107698845,LOC107710788,LOC107678419,LOC107748986 other upstream 221331 22926456 ~ 22931165 (-)
G66410 LOC107687112,LOC107595766 other upstream 871828 23576953 ~ 23583368 (-)

Expression


Co-expression Network