LOC122350936 (LOC107710771,LOC106926566,LOC107691064)


Basic Information

Item Value
gene id LOC122350936
gene name LOC107710771,LOC106926566,LOC107691064
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 23403713 ~ 23410561 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU98171
AAGAAACCTCAGCGCAGCAAGCGAGAACAATGTCAAGCGAGACAGGTTTTTGGGCTCCTGGTCCTTAGTAATGCTCACGGTTAACCGTTGTTGTTCTAGTACTGATACGGACAGTTTGGGTCAGCCATGCGGTGCTGAGTTACTTGAGTTTTGTGAGCATCTTCAATCCGATCTTGCAGAGTTTCTCAATGCTACATGGAGAGGTGAGTTATTGGATGCTAATGAAACCAGAGTTTTTACTCTAGCAGTTGAGAAGATATTAAACACATGGGGCGTCGGAGATGTCGATGGCGGTCTACTCAAAC
>XM_043247710.1
GACAgtcaaatatgattttatagCGTTTGATTTCGATTTCGATTCAAGAGACTTAAGTAAAAGTAATTTGAAACACAAGGGTAGTCTCATGTCATCACTGGAGTACACGAAAAAGGATTGTTTCGCGTCCGGGACTCTGTCATCCGCCTCTCTGAAAGGCACTTTAACAAAAATCAACGGCCGGAGACATAAAGCGCGAAAGAAGATCTCGCCTCGAAACAAAGAGGAGCCAGAAGCAGAATGTGACGTTTGCAGGCTGTCTTTGCTCAGTTGTGGCAGTCGCAGTCGTACCGTTCGGCGAATCCTGATCGCTTGTGTGATCTCTCTCCTGGCTCTTCTCTCTGCTGTGAGCATGGACTTCAACTCGTCTTTGGCTCAGTGGCAAGCTACTGAAGCTTCACTGAAAGAGCTCACGTCCTGCAGGACAAACGTAACTCTCAGACTTGTCATGGAGCTCCAGACATTAAGAAACCTCAGCGCAGCAAGCGAGAACAATGTCAAGCGAGACAGGTTTTTGGGCTCCTGGTCCTTAGTAATGCTCACGGTTAACCGTTGTTGTTCTAGTACTGATACGGACAGTTTGGGTCAGCCATGCGGTGCTGAGTTACTTGAGTTTTGTGAGCATCTTCAATCCGATCTTGCAGAGTTTCTCAATGCTACATGGAGAGGTGAGTTATTGGATGCTAATGAAACCAGAGTTTTTACTCTAGCAGTTGAGAAGATATTAAACACATGGGGCGTCGGAGATGTCGATGGCGGTCTACTCAAACACAACACAGACTGGACAGATGTCCTTGCTCTCAAACTGCTTTTAACTGTCCAGGAGTTGAACTATCGCTGGATAACAGGGGAAAAGAAAGTAGATGAAATATGGCATGCAACAACGCTCATGTCAGTCTTAAAAGGCATGTCTGAAAACCTCCATAACTGCTGGACGGAAAACACTGATTTAGAGCTAAACCGGAGCAATATAAAAGATTTCATCTTCTCTCCTGCCACGGCTTCCGTTGGATCCACCGAGTTGATTCTGGCCTTGGAGAACACTCTGAGATGCTTTCACGCCAGAGCTGGATGGGCTCTGAAACTGAAGTCCAGAGACATCTCGTCCAGCATCAGTCTGAAGATCTGCCTGCTTGCCATCGCCTGTCTCATTTACCCCATAGTGCTGCTCTCCTTCAAACAAATGACAGAATGGATCCAGGACTACGCTCAGAGCCTGAGGGAGAAGACAGAAGACCTGAAGAGAGAACGGCGTCTCGCAGAAGATCTCCTTCATCAGATGCTGCCCAAATCTGTGGCCAAGCAGCTACGTCAACGCAAACACGTAGAGGCTGAGAGTTATGAGAAGGTGACTATTTTCTTCTCAGACATTGTGGGTTTTACTGCGATATCTGCCTCCTGCACCCCACTACAAGTTGTAGAGATGCTAAATAACCTCTACATGTGCTTCGACACACGCATTGACTCCTATGATGTCTACAAGGTGGAGACTATAGGAGACGCGTACATGGTGGTCAGTGGACTGCCAGAGAGAAACGGAGACAGACATGCAGATGAGATAGCTAAAATGTCTCTGGATCTGGTGGCTGCGGTCAGACAGGTGCCAGTACCTCACATGCCTAACAAACGCCTTCAGCTCCGAGCCGGAATACAcacagGTCCTTGTGTAGCTGGCATTGTTGGGTACAAGATGCCACGGTACTGTTTGTTTGGAGACACAGTCAATACGGCCTCTCGGATGGAGTCCACCAGCCTGCCACAGAAGATTCATGCAAGCTCTGCTACATACCTGGCACTCATGAAGGACAATGCGTACGAGCTGCAGCTACGCGGCGAGATCGAAGTGAAGGGAAAAGGAACGATGAACACTTACTGGTTGATCGGTCACAAAAACTACAGTGTTCAGAATGACAGTTTGGTTTGTCACTGGAACCCCAACATCTCAAGAAAGAAAAAGGCCCCTGTAGGGAGCAACATATCCATAGAGAATTCCAGCATCACTGTCCAGAGTATAGGTGACAGTACCACGCCAGCCTCTCAACCTGAAGTCCTGCCCAGACTggaggggtcagaggtcacactGTGCGTTTCTGCACAGGTGGAGAACCGCGGCAGCAGCTTCGGGACGCTGGGATCCATGGTGGGGGCGCTGCAGGGGGAGCAGGAGACGGAGCAACCTGCACACAACCAACACAACGATAAAACCTCTCTGCTTCCCGGTGCAGTGACACACAGCTGATCTGTAGTGTCCAAGTGAACAGAACGAAGCgcacaatttacatttattgattttatttgaaggCGTATGAGACTGCGTGTGTGCTACGTGGCCCtttattgtgttaaaaatgatttcatctAAATCAATAAGGAAATGATATCGGTCAcgtatattttaatacatgttcATCTATTGTTAAGATATTTTAGGTATTTACTAGTAGCCATATTTGTAGCTACTTGTTTTCAAACCTCAAAACTCTGATTATCTTGCTTCAGTTTGGAAGAACTGGAAGAAATCTGTGTCAAAATAATGCTGCTTATTATAAAaccttctttttatttactttcaatatttcatttgtaaGGTGAGGATAGCTGCCAGGTATGTTCAGAGTTACCTGCCTCATCCCAGTGTTTCTGTCATATTTCAtgttattggttttattttgccACTGTTCGGTTTTTATGAACTTtctcgttttctttctttcttgcttgcTTTCTTTGTAA

Function

NR:

description
PREDICTED: atrial natriuretic peptide receptor 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU98171 False 305 lncRNA 0.46 1 23405008 23405312
XM_043247710.1 True 2733 mRNA 0.46 8 23403713 23410561

Neighbor

gene id symbol gene type direction distance location
plod1a plod1a,plod1,LOC107698842,LOC107678430,LOC107748983 coding upstream 434740 22956869 ~ 22968973 (+)
LOC122350040 NA coding upstream 457559 22944210 ~ 22946154 (+)
fam110a LOC107755603,LOC107703992,LOC107678459,LOC107570008,LOC107553114,LOC107752568 coding upstream 689598 22710095 ~ 22714115 (+)
prickle3 LOC107752556,LOC107678453,LOC107755595,LOC107703993 coding upstream 694155 22673889 ~ 22709558 (+)
plp2b plp2,LOC107570007,LOC107755602,LOC107553143,LOC107752558,LOC107678458 coding upstream 730431 22661149 ~ 22673282 (+)
nppal zgc:195023,LOC107595800,LOC107748995 coding downstream 12111 23422672 ~ 23423662 (+)
nppb LOC107687134,LOC107748982,LOC107595789 coding downstream 15347 23425908 ~ 23427204 (+)
nppa nppa,LOC107691053,LOC107602452,LOC107595801,LOC107687143 coding downstream 18354 23428915 ~ 23430926 (+)
mthfr mthfr,LOC107602465,LOC107691055,LOC107687111 coding downstream 36630 23447191 ~ 23456783 (+)
plch2a LOC107687112,LOC107595766,LOC107691057,LOC107748961,LOC107602463 coding downstream 72334 23482895 ~ 23583377 (+)
LOC122350913 NA non-coding upstream 163901 23231564 ~ 23239812 (+)
G66344 NA non-coding upstream 165460 23237977 ~ 23238253 (+)
LOC122350915 NA non-coding upstream 172689 23230043 ~ 23231024 (+)
LOC122350789 NA non-coding upstream 492331 22909647 ~ 22911382 (+)
G66261 NA non-coding upstream 603559 22799639 ~ 22800154 (+)
G66350 NA non-coding downstream 22248 23432809 ~ 23433745 (+)
G66351 NA non-coding downstream 23557 23434118 ~ 23435033 (+)
G66416 NA non-coding downstream 204655 23615216 ~ 23616682 (+)
G66418 LOC107748960,LOC107687117,LOC107691060,LOC107595771,LOC107602461,LOC107755278 non-coding downstream 210366 23620927 ~ 23623471 (+)
LOC122350145 NA non-coding downstream 265873 23676434 ~ 23681832 (+)
prdm16 prdm16,si:ch211-263k4.2 other upstream 2151 23054616 ~ 23401562 (+)
mfn2 mfn2,LOC107748965,LOC107602467,LOC107710790,LOC107678429,LOC107698839,LOC107595787 other upstream 416551 22973995 ~ 22987162 (+)
wrap73 LOC107748967,LOC107698846,LOC107595759,LOC107678416,LOC107602469,LOC107710786 other upstream 477945 22899436 ~ 22925768 (+)
fkbp1aa fkbp1aa,fkb1b,fkbp1a,LOC107574256,LOC107553142,LOC103030299,LOC107752559,LOC100705189 other upstream 676269 22724582 ~ 22727444 (+)
mfsd2al2 NA other upstream 679805 22715379 ~ 22723908 (+)
ndufa7 ndufa7,LOC107748992,LOC107755274 other downstream 221789 23632350 ~ 23634065 (+)
acot7 acot7,LOC107754737,LOC107687121,LOC107693425 other downstream 342007 23752568 ~ 23804049 (+)

Expression


Co-expression Network