acot7 (acot7,LOC107754737,LOC107687121,LOC107693425)


Basic Information

Item Value
gene id acot7
gene name acot7,LOC107754737,LOC107687121,LOC107693425
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 23752568 ~ 23804049 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU98363
ATCAAGTTAACCACGTGCACATTTCCTGAGaattttgtctgtgtttgttgtcGTTGATCTTGCGTAAATCTGCAGATCTAACTTACATGTAAAAAGTTTATGACGGCGCTGAGGCAGAACCAGCTCCTCCACCATCTGTGGAAACAGAACTGGGGGGCCAGAATGCGGAGTACTACGTCGAGgATAATGCGTCCTGATGATGCCAACATTGTTGGCAATGTTCATGGTGGGACTATCCTAAAGATGATTGAGGAAGCGGGATGCATCATTGGCACACGCCATTGCAATACTCAGACTGGGGACCGCTGTGTAGCTGCTCTGGCTCGGGTGGAGCGCACAGACTTCCTGCACCCAGTGTTCATCGGTGAAGTAGCCCACGTCAGTGCTGAGATTACCTACACCTCCAAACACTCGGTGGAGGTGCAGGTTAATGTTCTCTCAGAGAACATAGTCACAGgtGCCAAAAAATTGACCAACAAGGCAACACTATGGTATGTCCCACTGTCCCTTCACAATGTGGCCAAAATCATTGAAGTTCCTCCTATTGAGTATTCTAGCCCAGAACAAGAGGAAGCAGGTAAAAAGAGATATGAAGCCCAGAAATTCGAGCGAATAGAGACTAAAGAGAGGAATGGCGAGATCAtagtttctgtctctcttccaGaGCCCTACACTGTTGCATTTAGCCAATCGAGTCTGATCCACCTCATAGGCCCATCTGACTGCACTCTACATGGCTTTGTACATGGAGGAGTGACCATGAAGCTGATGGATGAGGTGGCAGGGATTGTTGCTGCTCGGCACTGCAAGACCAACATTGTAACCGCATCAGTGGATGCCATTAACTTCCATCGC
>TU98365
ATCAAGTTAACCACGTGCACATTTCCTGAGaattttgtctgtgtttgttgtcGTTGATCTTGCGTAAATCTGCAGATCTAACTTACATGTAAAAAGTTTATGACGGCGCTGAGGCAGAACCAGCTCCTCCACCATCTGTGGAAACAGAACTGGGGGGCCAGAATGCGGAGTACTACGTCGAGgATAATGCGTCCTGATGATGCCAACATTGTTGGCAATGTTCATGGTGGGACTATCCTAAAGATGATTGAGGAAGCGGGATGCATCATTGGCACACGCCATTGCAATACTCAGACTGGGGACCGCTGTGTAGCTGCTCTGGCTCGGGTGGAGCGCACAGACTTCCTGCACCCAGTGTTCATCGGTGAAGTAGCCCACGTCAGTGCTGAGATTACCTACACCTCCAAACACTCGGTGGAGGTGCAGGTTAATGTTCTCTCAGAGAACATAGTCACAGgtGCCAAAAAATTGACCAACAAGGCAACACTATGGTATGTCCCACTGTCCCTTCACAATGTGGCCAAAATCATTGAAGTTCCTCCTATTGAGTATTCTAGCCCAGAACAAGAGGAAGCAGGTAAAAAGAGATATGAAGCCCAGAAATTCGAGCGAATAGAGACTAAAGAGAGGAATGGCGAGATCAtagtttctgtctctcttccaGATAGACAAACAAAAGaGCCCTACACTGTTGCATTTAGCCAATCGAGTCTGATCCACCTCATAGGCCCATCTGACTGCACTCTACATGGCTTTGTACATGGAGGAGTGACCATGAAGCTGATGGATGAGGTGGCAGGGATTGTTGCTGCTCGGCACTGCAAGACCAACATTGTAACCGCATCAGTGGATGCCATTAACTTCCATCGC
>TU98369
GTAACTACACCGCTTATATGAATCGATGACCGACTCGCGCCTTTTTCTTCAATGCTCGAAAGCAGAATCGGAGTATGATTGTCACAACGTATTTTACCACAATACTGAAAGTAGTCTAGCCAATCGATTTACCCTTCAAACCTGCAGCTCCGCCTGACTCAGTCCGTTTCATTACGACACGCGGATACGGGGTTAAAGACGAGCCTCGACGCAAGATCGCGATGTCTTTTTCTAATGCACAAGCGACACCATCCATCCAGATATGCAGgATAATGCGTCCTGATGATGCCAACATTGTTGGCAATGTTCATGGTGGGACTATCCTAAAGATGATTGAGGAAGCGGGATGCATCATTGGCACACGCCATTGCAATACTCAGACTGGGGACCGCTGTGTAGCTGCTCTGGCTCGGGTGGAGCGCACAGACTTCCTGCACCCAGTGTTCATCGGTGAAGTAGCCCACGTCAGTGCTGAGATTACCTACACCTCCAAACACTCGGTGGAGGTGCAGGTTAATGTTCTCTCAGAGAACATAGTCACAGgtGCCAAAAAATTGACCAACAAGGCAACACTATGGTATGTCCCACTGTCCCTTCACAATGTGGCCAAAATCATTGAAGTTCCTCCTATTGAGTATTCTAGCCCAGAACAAGAGGAAGCAGGTAAAAAGAGATATGAAGCCCAGAAATTCGAGCGAATAGAGACTAAAGAGAGGAATGGCGAGATCAtagtttctgtctctcttccaGaGCCCTACACTGTTGCATTTAGCCAATCGAGTCTGATCCACCTCATAGGCCCATCTGACTGCACTCTACATGGCTTTGTACATGGAGGAGTGACCATGAAGCTGATGGATGAGGTGGCAGGGATTGTTGCTGCTCGGCACTGCAAGACCAACATTGTAACCGCATCAGTGGATGCCATTAACTTCCATCGC
>TU98371
AGCGATGTGTGGATGGAGGAAATGAATGAAAGACTGTCACTGTCGCGGATACGCTCACTGTTGGGAACTTCTCAAGTCTCTGTCGTCTAACTTTTAAGAAGTTATGGTGTCTCATTATGTGCTCAGCAGgATAATGCGTCCTGATGATGCCAACATTGTTGGCAATGTTCATGGTGGGACTATCCTAAAGATGATTGAGGAAGCGGGATGCATCATTGGCACACGCCATTGCAATACTCAGACTGGGGACCGCTGTGTAGCTGCTCTGGCTCGGGTGGAGCGCACAGACTTCCTGCACCCAGTGTTCATCGGTGAAGTAGCCCACGTCAGTGCTGAGATTACCTACACCTCCAAACACTCGGTGGAGGTGCAGGTTAATGTTCTCTCAGAGAACATAGTCACAGgtGCCAAAAAATTGACCAACAAGGCAACACTATGGTATGTCCCACTGTCCCTTCACAATGTGGCCAAAATCATTGAAGTTCCTCCTATTGAGTATTCTAGCCCAGAACAAGAGGAAGCAGGTAAAAAGAGATATGAAGCCCAGAAATTCGAGCGAATAGAGACTAAAGAGAGGAATGGCGAGATCAtagtttctgtctctcttccaGATAGACAAACAAAAGaGCCCTACACTGTTGCATTTAGCCAATCGAGTCTGATCCACCTCATAGGCCCATCTGACTGCACTCTACATGGCTTTGTACATGGAGGAGTGACCATGAAGCTGATGGATGAGGTGGCAGGGATTGTTGCTGCTCGGCACTGCAAGACCAACATTGTAACCGCATCAGTGGATGCCATTAACTTCCATCGC
>XM_043246225.1
ATCGATGACCGACTCGCGCCTTTTTCTTCAATGCTCGAAAGCAGAATCGGAGTATGATTGTCACAACGTATTTTACCACAATACTGAAAGTAGTCTAGCCAATCGATTTACCCTTCAAACCTGCAGCTCCGCCTGACTCAGTCCGTTTCATTACGACACGCGGATACGGGGTTAAAGACGAGCCTCGACGCAAGATCGCGATGTCTTTTTCTAATGCACAAGCGACACCATCCATCCAGATATGCAGgATAATGCGTCCTGATGATGCCAACATTGTTGGCAATGTTCATGGTGGGACTATCCTAAAGATGATTGAGGAAGCGGGATGCATCATTGGCACACGCCATTGCAATACTCAGACTGGGGACCGCTGTGTAGCTGCTCTGGCTCGGGTGGAGCGCACAGACTTCCTGCACCCAGTGTTCATCGGTGAAGTAGCCCACGTCAGTGCTGAGATTACCTACACCTCCAAACACTCGGTGGAGGTGCAGGTTAATGTTCTCTCAGAGAACATAGTCACAGgtGCCAAAAAATTGACCAACAAGGCAACACTATGGTATGTCCCACTGTCCCTTCACAATGTGGCCAAAATCATTGAAGTTCCTCCTATTGAGTATTCTAGCCCAGAACAAGAGGAAGCAGGTAAAAAGAGATATGAAGCCCAGAAATTCGAGCGAATAGAGACTAAAGAGAGGAATGGCGAGATCAtagtttctgtctctcttccaGATAGACAAACAAAAGaGCCCTACACTGTTGCATTTAGCCAATCGAGTCTGATCCACCTCATAGGCCCATCTGACTGCACTCTACATGGCTTTGTACATGGAGGAGTGACCATGAAGCTGATGGATGAGGTGGCAGGGATTGTTGCTGCTCGGCACTGCAAGACCAACATTGTAACCGCATCAGTGGATGCCATTAACTTCCATCGCAAAATCAAGAaagGCTGTGTCATTACTGTTTCCGGCCGAATGACTTTCACAAGTAATAAGTCAATGGAGATTGAGGTTTTCGTTGACGCTGACCCACTGGTGGAGGCTGAGAAGGGGAAATATAGGGCTGTTACAGCCTTCTTCACCTACATCCTGGACAAAGAAAATAAGCCCCTACCAGTGCCACCGCTGAAATTGGAAGGTGAAGAGGAGCAGAAGCGGTTTGAAGAAGGGAAAGCACGCTACCTGCAGAACAAGGCAAAGAGACTCGCTTGA

Function

symbol description
acot7 Predicted to enable long-chain fatty acyl-CoA binding activity and palmitoyl-CoA hydrolase activity. Predicted to be involved in acyl-CoA metabolic process and palmitic acid biosynthetic process. Predicted to be active in cytosol and nucleoplasm. Orthologous to human ACOT7 (acyl-CoA thioesterase 7).

NR:

description
cytosolic acyl coenzyme A thioester hydrolase isoform X5

GO: NA

KEGG:

id description
K17360 ACOT7; acyl-coenzyme A thioesterase 7

RNA

RNA id representative length rna type GC content exon number start site end site
TU98363 False 855 TUCP 0.48 7 23753461 23783631
TU98365 False 870 TUCP 0.48 8 23753461 23783631
TU98369 False 941 TUCP 0.48 7 23752568 23783631
TU98371 False 817 TUCP 0.48 8 23755691 23783631
XM_043246225.1 True 1211 mRNA 0.48 12 23752589 23804049

Neighbor

gene id symbol gene type direction distance location
hes2.2 LOC107595804,LOC107748990,LOC107687144,LOC107734829 coding upstream 137 23750246 ~ 23752431 (+)
hes2.1 hes2.1,LOC107748974,LOC107687139,LOC107577158 coding upstream 11337 23740350 ~ 23741231 (+)
ybx1 ybx1,LOC107595774,LOC107748958,LOC107693424,LOC107602459 coding upstream 88134 23658081 ~ 23664434 (+)
ppih ppih,LOC107595772,LOC107602460 coding upstream 95717 23635149 ~ 23656851 (+)
dpp9 dpp9 coding upstream 140065 23598728 ~ 23612503 (+)
LOC122350042 acot7 coding downstream 24617 23828666 ~ 23864915 (+)
LOC122350978 gpr153,LOC107687122,LOC107693426 coding downstream 67187 23871236 ~ 23900075 (+)
LOC122351094 sult1st3,LOC107727994,LOC107594958,LOC107727992,LOC107687124,LOC107687147,LOC107687125 coding downstream 138712 23942761 ~ 23953590 (+)
LOC122350539 sult1st3,LOC107727992,LOC107687125,LOC107687124,LOC107594958,LOC107738928,LOC107727989 coding downstream 151999 23956048 ~ 23963140 (+)
LOC122350362 LOC107687124,LOC107727989,LOC107594958,LOC107727992,LOC107687125 coding downstream 163476 23967525 ~ 23972075 (+)
LOC122350145 NA non-coding upstream 70736 23676434 ~ 23681832 (+)
G66418 LOC107748960,LOC107687117,LOC107691060,LOC107595771,LOC107602461,LOC107755278 non-coding upstream 129097 23620927 ~ 23623471 (+)
G66416 NA non-coding upstream 135886 23615216 ~ 23616682 (+)
G66351 NA non-coding upstream 317535 23434118 ~ 23435033 (+)
G66350 NA non-coding upstream 318823 23432809 ~ 23433745 (+)
ndufa7 ndufa7,LOC107748992,LOC107755274 other upstream 118503 23632350 ~ 23634065 (+)
LOC122350936 LOC107710771,LOC106926566,LOC107691064 other upstream 342007 23403713 ~ 23410561 (+)
prdm16 prdm16,si:ch211-263k4.2 other upstream 351006 23054616 ~ 23401562 (+)
mfn2 mfn2,LOC107748965,LOC107602467,LOC107710790,LOC107678429,LOC107698839,LOC107595787 other upstream 765406 22973995 ~ 22987162 (+)
wrap73 LOC107748967,LOC107698846,LOC107595759,LOC107678416,LOC107602469,LOC107710786 other upstream 826800 22899436 ~ 22925768 (+)

Expression


Co-expression Network