dohh (dohh,LOC107745802,LOC107548993,LOC107585881,LOC107695215)


Basic Information

Item Value
gene id dohh
gene name dohh,LOC107745802,LOC107548993,LOC107585881,LOC107695215
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 10253890 ~ 10256950 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043245989.1
AATCTAGTTACTGGATGACACGAGTGAGACGGTTCCTTCTTGAGTGGACGGCATGGGAAGGGTGATGGAGAACGCTCTATGAAAAAAACTACCTCTCGTAgtTCTGTATATGCTGCTCTCTGGAGTACCCAGCTTAACCTGTGCATAAGGACATCAGCGTGATACTGAAAGCTTCCTCATGGCAAACGATGCGGATATAGCAGAGGTGGGGAGCATTCTCGTCAACCCAAAGCAGGACCTGACAACGCGCTTTAGAGCACTTTTTACTCTCCGCAACCTCGGTGGACCAGAGGCTATTACATGGATCAGTGAAGCTTTTGTGGATGAATCTGCACTTCTGAAGCATGAGCTGGCATACTGCCTCGGCCAAATGCAAGATGAGCGAGCAATTCCTATCCTAGAGACGGTCCTGAAAGACGCTAATCAAGAGCCAATGGTCAGACATGAAGCAGGAGAAGCATTGGGAGCCATTGGAAATCCCAAAGTCTTAAATTTATTGAAGAAATATGCAGAAGATCCAGTAATTGAGgtGGCAGAAACATGTCAACTTGCAGTCCGGAGACTGGAGTGGCTCATGAATGGTGGGGAAAAGACAGCAGAGGGCACAGATGAGAACCCCTACTGCTCTGTGGACCCCGCTCCCCCCGCCCCAAGGAAAAGTGTCCCGGAGCTGAGGGCTCAACTTTTAGACGAAAGCCTGTCGCTGTTTGACCGCTATAGGGCTATGTTTGCACTGAGGAATCTTGGGACCGAAGAGGCTGTTCTGGCTCTTGGAGATGGTCTTCAATGCAGCAGTGCCTTATTCCGCCATGAAATCGGTTACGTCTTGGGTCAGATCCAACACGAGGCCAGCATCCCTCAGCTGCAGGCAGCTTTGGAGAAAACGGAAGAGAACGCCATGGTCAGACACGAGTGCGCAGAGGCGCTGGGCTCCATCGGGAAGGAAGCGTGCTTACAGATCCTAGAGCTCTACAGGAAGGACCAGGAGCGGGTGGTGAAGGAGAGCTGCGAGGTGGCACTGGACATGCTGGAGTATGAGAACAGCTCGCAGTTTCAGTATGCGGACGGACTGCTTAGGCTGAAAACTCCTCAGTGAAACATTTCCTGAAACGTGCTCATGTTACACAGCTAATCCGTATTTTCGAATGCGAAAAGCATTTtgtgaatgcttgaatattttataaacgCTGCTTTTGGggacaaagcaaaataaaagtatatgaaaaaacaggaatacatttacataataaaagcatttatttgacctcA

Function

symbol description
dohh Predicted to enable deoxyhypusine monooxygenase activity and iron ion binding activity. Predicted to be involved in peptidyl-lysine modification to peptidyl-hypusine. Orthologous to human DOHH (deoxyhypusine hydroxylase).

NR:

description
PREDICTED: deoxyhypusine hydroxylase-like isoform X1

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0008612 peptidyl-lysine modification to peptidyl-hypusine biological_process
GO:0046872 metal ion binding molecular_function
GO:0019135 deoxyhypusine monooxygenase activity molecular_function

KEGG:

id description
K06072 DOHH; deoxyhypusine monooxygenase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043245989.1 True 1269 mRNA 0.49 5 10253890 10256950

Neighbor

gene id symbol gene type direction distance location
myo1f myo1f,LOC107750961,LOC107585872,LOC107548903,LOC107731286,LOC107695252,LOC108413823 coding downstream 258782 9979636 ~ 9995108 (-)
acer1 acer1,LOC107731201,LOC107676796,LOC107585930,LOC107550428 coding downstream 277128 9970128 ~ 9976762 (-)
rfx2 rfx2,LOC107676724 coding downstream 320879 9900496 ~ 9933011 (-)
lpxn LOC107676702,LOC107717550,LOC107585869,LOC107695247,LOC107750911 coding downstream 397284 9852232 ~ 9856606 (-)
trabd2b si:ch211-120j21.1,LOC107717551,LOC107585868,LOC107676673,LOC107695245,LOC107548850,LOC108442342 coding downstream 416440 9786252 ~ 9837450 (-)
LOC122349939 LOC107731225,LOC107701761,LOC107585934,LOC107745801,LOC107550447,LOC100005423 coding upstream 195 10257145 ~ 10259192 (-)
haus5 LOC107731222,LOC107585885,LOC107745798,LOC107695262 coding upstream 7891 10264841 ~ 10271997 (-)
si:dkeyp-82a1.6 LOC107550035 coding upstream 23353 10280303 ~ 10284362 (-)
zgc:112962 LOC107695265,LOC107745796 coding upstream 27542 10284492 ~ 10291110 (-)
LOC122350862 aldh9a1,aldh9a1a.1,aldh9a1a.2,LOC107695268,LOC107668102,LOC108441636 coding upstream 34748 10291698 ~ 10297072 (-)
G62795 NA non-coding downstream 634 10250633 ~ 10253256 (-)
G62789 NA non-coding downstream 96697 10156975 ~ 10157193 (-)
G62788 NA non-coding downstream 100985 10152239 ~ 10152905 (-)
LOC122350767 NA non-coding downstream 102899 10127885 ~ 10150991 (-)
G62768 NA non-coding downstream 176238 10077417 ~ 10077652 (-)
G62800 NA non-coding upstream 6868 10263818 ~ 10264761 (-)
G62805 NA non-coding upstream 44712 10301662 ~ 10301885 (-)
G62817 NA non-coding upstream 68791 10325741 ~ 10327208 (-)
G62821 NA non-coding upstream 113383 10370333 ~ 10373331 (-)
G62824 cry1 non-coding upstream 124767 10381717 ~ 10443630 (-)
smim24 smim24,LOC107580287 other downstream 5734 10245196 ~ 10248156 (-)
adamts10 adamts10,LOC107676806,LOC107585873,LOC107731268,LOC107695212,LOC107549976,LOC106613844 other downstream 212121 9995547 ~ 10041769 (-)
mllt1a mllt1a,LOC107731200,LOC107676782,LOC107695250,LOC107549968,LOC107585916 other downstream 284405 9954681 ~ 9969485 (-)
fam78bb fam78bb,LOC107717547,LOC107676968,LOC107751100,LOC107550401,LOC107585866,LOC107695225 other downstream 545269 9700394 ~ 9708621 (-)
mindy4 LOC107699968,LOC107585839,LOC107548580 other downstream 991064 9257243 ~ 9262826 (-)
G62760 gpr37l1b,LOC107585901,LOC107731282,LOC107668115,LOC107549203,LOC107695275,LOC107745785,LOC108441645 other upstream 132233 10389183 ~ 10392043 (-)
G62826 cry1ba,LOC108265656,LOC108441644,LOC103461922,LOC105026018,LOC102226488 other upstream 183814 10440764 ~ 10480051 (-)
trnar-ccg_26 NA other upstream 283269 10540219 ~ 10540291 (-)
cep104 cep104,LOC107668088,LOC107745778 other upstream 716355 10973305 ~ 10990735 (-)
LOC122349915 nphp4,LOC107550077,LOC107695281 other upstream 839190 11096140 ~ 11131238 (-)

Expression


Co-expression Network