LOC122349890


Basic Information

Item Value
gene id LOC122349890
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 21230754 ~ 21232347 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043246015.1
TGAGTTTTTGATGGTCAGCCTGTCCCATCTGAAGGAAGAGGGCGAGCTTCTGCGGAGCTACTGGCCAAAATACACCTGTCCTGTGGCTAATATGGAATTCCAGCTCAACCGTCTGCGCACCTGTAACAGCTGTGGCTTCCAGAGGAGCTTCAGAGAGGATTACAACTACCTCTCTGTGGTCATCGGTCCTCGAGGATGCCTCATAGACAGCCTGCAGCAGTACTTCAAAaGATCTTCGTTTGACTGCTCATGCAGCGAGTGCGCCGGCTCTACAGCCTCTGAGGAGCTGGAAGTAATTGTCCTTCCACGcatcctggTGCTTCTGGTCATGCGTTTTGATATCGCATCCTCAATGTCCAAGCTGAAGGATCGACTGAAAGTCCCAAAAGAGTTTTCTCTGTCCTGCAGCACAGgTGGAAGCATCAGACAGCAGCTGCACACAGTACAGACTATCTGCTGCTGTGTCACATCTGGGCAGCAGTTTGTATTGTGGGCACTACATCAGTCACATCCCTGACCTCAGTGGATCTGGATGGCTGGAATGCAGCGACTCATCCATCAGAAAATCCAGCTGGTCCAAAGCCTCATGTAACATCGAGAGAAACGGATACATGCTCTTCTATGTGAAGAGCTGAGCAGAAGCTGATTGATGATGCAGTTTTGAAGAGGAAAGGAAACACTGCAGAGATGCATTCTGGAGAGATCTACATCAGTGTTTCACTGCAAGAAAAGCAGACTGCtcctaataaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043246015.1 True 751 mRNA 0.49 7 21230754 21232347

Neighbor

gene id symbol gene type direction distance location
LOC122349897 NA coding downstream 47065 21182724 ~ 21183689 (-)
klhl22 klhl22,LOC107747800,LOC107563177,LOC107698116,LOC107678468,LOC107556236 coding downstream 100980 21106860 ~ 21129774 (-)
LOC122350417 phyhip,LOC107747796,LOC107721105,LOC107698112,LOC107556234,LOC107678475,LOC108426626 coding downstream 287449 20931950 ~ 20943305 (-)
LOC122350675 cox5b1,LOC107698109,LOC107556219,LOC107747804,LOC108426657,LOC107602047,LOC107718706 coding downstream 311654 20917028 ~ 20919100 (-)
tcf7l1b tcf7l1,tcf7l1b,LOC107721095,LOC107556226,LOC107747791,LOC107563849,LOC107698102,LOC108265410,LOC106585616 coding downstream 408702 20771693 ~ 20822052 (-)
nkx3-1 LOC107710828,LOC107665190 coding upstream 155344 21387691 ~ 21389140 (-)
nkx2.7 nkx2.7,LOC107710827,LOC107665191,LOC107747717,LOC107553134,LOC107678399,LOC107559447 coding upstream 168230 21400577 ~ 21402547 (-)
stc1 stc1,LOC107747716,LOC107665189,LOC107553168,LOC107559448,LOC107678391 coding upstream 184425 21416772 ~ 21432121 (-)
LOC122350763 ido1,LOC107553133,LOC107665200,LOC107710826,LOC107678376,LOC107718947 coding upstream 274432 21506779 ~ 21513320 (-)
acsl2 acsl2,LOC107710839,LOC107665192,LOC107553163,LOC107716609,LOC107678403,LOC108426687 coding upstream 465461 21697808 ~ 21729217 (-)
G65835 LOC107721099,LOC107747802,LOC107556211,LOC107698076,LOC107678378,LOC107563165 non-coding downstream 128202 21100084 ~ 21102552 (-)
G65793 NA non-coding downstream 215818 21013424 ~ 21014936 (-)
G65792 NA non-coding downstream 218620 21008975 ~ 21012134 (-)
G65764 NA non-coding downstream 272796 20956934 ~ 20957958 (-)
G65759 NA non-coding downstream 279056 20949198 ~ 20951698 (-)
LOC122350047 NA non-coding upstream 13738 21246085 ~ 21247187 (-)
G65896 entpd4,LOC107553130,LOC107698120,LOC107710847 non-coding upstream 117103 21349450 ~ 21352952 (-)
G65897 entpd4,LOC107678413,LOC107747713,LOC107698120,LOC107553130 non-coding upstream 121415 21353762 ~ 21355716 (-)
G65871 NA non-coding upstream 140896 21373243 ~ 21374591 (-)
G66046 NA non-coding upstream 338770 21571117 ~ 21644683 (-)
gna14a gna14a,gna14,LOC107698092,LOC107678467,LOC107556222,LOC107721075,LOC108426707,LOC108265545 other downstream 204923 21014993 ~ 21025831 (-)
LOC122350336 LOC107714596,LOC107556216,LOC107698089 other downstream 507599 20718940 ~ 20723155 (-)
LOC122350560 ppia,LOC107566959,LOC107756826,LOC107722982,LOC107591936,LOC107691583 other downstream 809458 20415065 ~ 20421296 (-)
zgc:154046 adamts13,zgc:154046,LOC107702807,LOC107548275,LOC107722731,LOC107702859,LOC108426726,LOC108265337,LOC107740996,LOC107565124,LOC107691587 other downstream 1096409 20118007 ~ 20134345 (-)
si:ch211-218o21.4 si:ch211-218o21.4,LOC107550930,LOC107702847,LOC107727198,LOC107747209,LOC107683911 other downstream 1797463 19428738 ~ 19433291 (-)
G66086 si:dkey-32e23.4,LOC107678420,LOC107562650,LOC107728358,LOC107710834 other upstream 539121 21771468 ~ 21776620 (-)
G66090 NA other upstream 552357 21784704 ~ 22254189 (-)
G66119 gfpt1,LOC107710818,LOC107752562,LOC107678434,LOC102792631 other upstream 781626 22013973 ~ 22025791 (-)
G66116 gfpt1,LOC107710818,LOC107678434,LOC107562636,LOC107553119,LOC107752562,LOC108426669,LOC103362312,LOC101170101 other upstream 796385 22028732 ~ 22031993 (-)
LOC122350973 dmtn,LOC107586118,LOC107687659,LOC107720576,LOC107553712,LOC107705088,LOC107571963,LOC107702870,LOC107723027 other upstream 827668 22060015 ~ 22068757 (-)

Expression


Co-expression Network