G30572


Basic Information

Item Value
gene id G30572
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 9865297 ~ 9866231 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU34573
AATATCCCTTTAACAGCCTTATGTTTCTAGAATCTATAACATGTACCAAGAATTCACCAGCGTTTGATGTCTTGAGCAGCATGGCTGTCTACATCCTCAGTAGTATATCACATAACACACAAACACACACATGCTTGTTTTACTATATTCCATTACATAAGCCCTATTCGGACGGGATTAGTTTTACATGGGGAGGTGGAGTAATGTAATTTTACCACAGGAACTCTGTAATATTAATGACCAGTTCGCACGGGATAAGACATCTCAGTAAAACTAGCAGAAGTGGGAGGGGTAACTCGATTTACGCCGTCACCTCCGTCGTCATGTGGGTATACGTTGCTTCCTGATACCATGTGCGCAAACACATATAATCTAAATATATAAACTATATATAACAGTTAGGTCCAGTCAAACGATTTATTAATTAAATTCCGATTGGATTATGATGGTAATAGGCTCTTAGCTAAAGCTAAAATTAGTTTTGTGCCACTGACAAGTGCTTTCGATCTTCTTTTTGCTCTGAATGGTATGAAAATACTTGAGACTTGTCCCACCACCTACAACACAAATGAATGTTTCTTCAAGCGCTTCCATGCTTGAAAAACGTGCGGAAAACTACTTTTAAACAGGAAATGACGGAATTTTACCGTACATATTTACAGCGGGTCTATTAGAATGGGATTGGTATTACCTGAGGTAATTTTTCCGGACCTTTTTCCGGAAGGTAAAAGTCGCCGTAATCTTTACTGACATTGTCCGTAATGATTACTGAGATGGCACATTCGGACGGGACTAAAATCACTGAGAAGCTCTGGTAATAATTACTTTACCCCACCACCCCATGTAAAACTAATCCCGTCCGAATAGGGCTATAGACTTCCATTGATTTTATATCAGGTTAAAATTTTCATGTTGGTTAAACCACATGATTTGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU34573 True 935 lncRNA 0.35 1 9865297 9866231

Neighbor

gene id symbol gene type direction distance location
CI01000004_09779903_09780536 NA coding downstream 84419 9779235 ~ 9780878 (-)
CI01000004_09754664_09774588 CDH6 coding downstream 90224 9753467 ~ 9775073 (-)
CI01000004_09703159_09711600 NA coding downstream 153299 9701926 ~ 9711998 (-)
CI01000004_09639469_09656035 NA coding downstream 209262 9638825 ~ 9656035 (-)
CI01000004_09616639_09622200 RNF31 coding downstream 242637 9616639 ~ 9622660 (-)
CI01000004_10271350_10272027 NA coding upstream 404967 10271198 ~ 10272206 (-)
CI01000004_10290550_10295288 CAHZ coding upstream 423632 10289863 ~ 10295357 (-)
CI01000004_10436514_10438365 NA coding upstream 570268 10436499 ~ 10439459 (-)
CI01000004_10458668_10465442 NA coding upstream 592431 10458662 ~ 10465703 (-)
CI01000004_10553379_10573352 PAXIP1 coding upstream 686806 10553037 ~ 10575243 (-)
G30448 NA non-coding downstream 49143 9815858 ~ 9816154 (-)
G30432 NA non-coding downstream 67694 9797374 ~ 9797603 (-)
G30412 NA non-coding downstream 116737 9748346 ~ 9748560 (-)
G30377 NA non-coding downstream 175791 9689274 ~ 9689506 (-)
G30376 NA non-coding downstream 176181 9688891 ~ 9689116 (-)
G30593 NA non-coding upstream 23298 9889529 ~ 9889756 (-)
G30600 NA non-coding upstream 30905 9897136 ~ 9897400 (-)
G30609 NA non-coding upstream 39961 9906192 ~ 9906403 (-)
G30647 NA non-coding upstream 99329 9965560 ~ 9965832 (-)
G30652 NA non-coding upstream 105200 9971431 ~ 9971731 (-)
G30316 NA other downstream 458376 9377937 ~ 9406921 (-)
G29746 NA other downstream 1507170 8354498 ~ 8358127 (-)
G29656 NA other downstream 1899797 7964364 ~ 7965500 (-)
G29388 NA other downstream 3233390 6631293 ~ 6631907 (-)
CI01000004_06539836_06541252 NA other downstream 3319725 6538904 ~ 6541252 (-)
G31203 NA other upstream 880206 10746437 ~ 10750641 (-)
CI01000004_11407198_11412220 ADCYAP1B, ADCYAP1 other upstream 1541234 11406957 ~ 11412907 (-)
G32150 NA other upstream 1910288 11776519 ~ 11780951 (-)
G32207 NA other upstream 2509937 12376168 ~ 12384780 (-)
CI01000004_14543631_14551256 NA other upstream 4684569 14541515 ~ 14551352 (-)

Expression


Co-expression Network