LOC122349927 (LOC107710781,LOC107748971,LOC107678464,LOC107698851)


Basic Information

Item Value
gene id LOC122349927
gene name LOC107710781,LOC107748971,LOC107678464,LOC107698851
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 22818969 ~ 22824591 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043246067.1
CATTTTAAGGTGTTTGTGGGACTGTGACTGAGCATGATGGGCGCCCTCGGGAACGGTCGACGTGGCGGTCGCTCTCCGTCTCTGCTTGTGGCGGCTCTCATCGCCTGCGTCCTCCTGCTCGGCTTCAACTACTGGGTCTCCAACTCCAGAAACGTGGAGCTGCAGAGCAGGATATTGGAGATGGAGAGCCGCATGAGGCAGCTGGCTGCCGACCGAGACCGAGAGCAGCAGAGCAAGCTGAAGGCCGAGGAGGAGATGCGCAGACGGAACGAGCAGCTGGAGTTAATGGAGGAAACCCACCAGAGACAGCAGGAAAACACTCTCAGCACCTGGAAACAAGAACGGGAGCATTTGAAGCTCAACATTTCCTCTAGTGCTAAAACAGTGCAAGACATGAAGAATCGCATGAAGTCGTTGATGGAGGATGTGAATAAAATGCAGAGCGAGCTGAAATCCTGTCAAACTAGCATGGACACGATCAGTAAGAAAGCCACCGGTGAAATGACTCAGTGTAACAAACAAATTGACGCCATGAAAGAGGACTGCGACGCGAAACTCTTAGCTGCCAAACTGGAGAAGCAAAAAACATCCGTAAAAGTTGCACCGCAGAATGCCGATGGTTCCATCCTGAAATCCTCTCTTTTAAAAGCCAAACCTGATGTTCCTGTTACAAACCGTTCAGATAAGAATGCGGCAGAACCTCGGAAAGTCAAAGCAGATGTGGATTCGCAGGCTAAAAAGGATGCTCACAACCAAATCGATGACTTGGTTATGGATGAGGATGAGAAAGATGCTGTAGTTTTAAAAGAGCCGCCCATACCCACCTCCAAACCGACCAATAAGAACGAGACCCTTAACAAACCAGCCAAGGAGGAAATTCCAGAGGCAGAGGTGGACGTTAAAGCACCGGCTTCAAAAAGACGAGATACTGTAATGGATGAAGCTGGGATTTTAGACCCAAAGGAAGATGACATGGGGATTGGAgatgagaaagaggaagaggccAAAATCGAGGACAGGAAAGAGGAAGACGAGCGATTGGGAAAGATGAAGCCATTATGTACACGACAACGAGGCGAGATAGAAAAACAGCTCTCCAGGATTAAAGatgAAAATCAAGGTGCTGGTCAAGATCTAGAGGACGATGTGGCAAACTATAACGGTGACGATGACAACCAGCCGGAGTCCGAGGATGAGAAGCAGGCTGAGCTTGCAGAGATGTAGTCCCCGATCACATGATGTGCCTGCTGACAGGAACAGTCCCTCCAGCTGAAGACCGTCAGAGACTCTCATCGGTGGCCGCTCTGAACCTCGCAGCGGCGGGAAAAGACGCCCGCTGTACAGACTGGGTGAATACTGCACTACTGTGTAATGAAGGATATGAGTTCAAATCTCATACGTCTTACCAGGACAGGCATGGTGAAAACGTTCTTTTCTAGTACTGATTTTAGGTTGAACTTGAATGTAACTACTACTCTTCTGACGTCGAGCCTTTTAACGAATGCGCCGCGGTGAATTTTCtctcttaaaatgaaaaatgctttgttttcgAACAAAAGCAACAGCTGTTCTGTTACAAAAGCTACTTTGTCTTGTCGTAAAGGTTTATGTTCTGTCTAAACATTTTAGCTGCTGAAAAGTGCATAGGAATATTAGATGTTTAGACAGAAAGACACTTAACAGTGCAATCCagtttttatttgctgtaaaaagttacttttatgtttaaatctttgcattatgatttctttttaacagtTAATGTTGggaactgtaatttttttaaagaaaacatggGTTTCTTACTGAATTTCTGatcttaataaatatttcagttgca

Function

NR:

description
PREDICTED: Golgi membrane protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043246067.1 True 1840 mRNA 0.46 10 22818969 22824591

Neighbor

gene id symbol gene type direction distance location
LOC122351014 LOC107757082,LOC107703982,LOC107757083,LOC107757080,LOC107678397 coding downstream 2622 22812855 ~ 22816347 (-)
LOC122350037 LOC107575601,LOC107757083,LOC107574252,LOC107752574,LOC107678367,LOC107678397,LOC107752571,LOC107552256,LOC107703982 coding downstream 28482 22779254 ~ 22790487 (-)
LOC122351034 LOC107552255 coding downstream 58855 22757776 ~ 22760114 (-)
LOC122350258 LOC107757082,LOC107757083,LOC107752574,LOC107757080,LOC107678397,LOC107575601,LOC107703982,LOC107752571 coding downstream 62784 22748545 ~ 22756185 (-)
LOC122350076 LOC107748967,LOC107595759,LOC107698846,LOC107678416,LOC107602469,LOC107710786 coding downstream 190410 22625423 ~ 22628559 (-)
aak1a aak1a,LOC107678431,LOC107710782,LOC107698849,LOC107748970,LOC108426667,LOC107595757,LOC107602451 coding upstream 12518 22837109 ~ 22874898 (-)
rer1 rer1,LOC107698848,LOC107595758,LOC107748969,LOC107678415,LOC107710784,LOC107602473 coding upstream 50527 22875118 ~ 22880115 (-)
tp73 tp73,LOC107698840 coding upstream 56432 22881023 ~ 22914169 (-)
LOC122350809 NA coding upstream 107542 22932133 ~ 22935123 (-)
kiaa2013 si:dkeyp-104h9.5,kiaa2013,LOC107698843,LOC107678452 coding upstream 123265 22947856 ~ 22955895 (-)
G66235 LOC107703993,LOC107755595 non-coding downstream 113844 22699448 ~ 22705125 (-)
G66217 LOC107664463,LOC107755600 non-coding downstream 161310 22654971 ~ 22657659 (-)
G66207 NA non-coding downstream 193792 22580402 ~ 22625177 (-)
G66206 NA non-coding downstream 269651 22547651 ~ 22549318 (-)
G66163 gkap1,LOC107562640,LOC107757429,LOC107664507,LOC107678454,LOC107553117 non-coding downstream 431186 22386082 ~ 22387783 (-)
G66337 NA non-coding upstream 158120 22982711 ~ 22983165 (-)
G66339 NA non-coding upstream 160755 22985346 ~ 22986961 (-)
LOC122350914 NA non-coding upstream 227291 23051882 ~ 23054592 (-)
G66368 NA non-coding upstream 416381 23240972 ~ 23245510 (-)
G66372 prdm16 non-coding upstream 558547 23383138 ~ 23383354 (-)
G66310 NA other downstream 22607 22795622 ~ 22796362 (-)
LOC122350259 LOC107678445,LOC107752560,LOC101882811,LOC107553112,LOC107757078,LOC108426735,LOC107703990,LOC107757081,LOC107553140,LOC107678447,LOC107752570 other downstream 71890 22727180 ~ 22747079 (-)
LOC122349902 nfu1,LOC107678441,LOC107553147,LOC107664472,LOC107570003 other downstream 178646 22637275 ~ 22640323 (-)
gfpt1 gfpt1,LOC107678434,LOC107553119,LOC108426669,LOC107710818,LOC107752562,LOC103362312,LOC101170101,LOC107562636 other downstream 553108 22243202 ~ 22265861 (-)
antxr1a antxrl,antxr1a,antxr1,LOC107661337,LOC107710819,LOC107562635,LOC108265351 other downstream 708882 22075010 ~ 22110087 (-)
ddx51 ddx51 other upstream 4613 22829204 ~ 22835591 (-)
tprg1l tprg1l,LOC107698845,LOC107710788,LOC107678419,LOC107748986 other upstream 101865 22926456 ~ 22931165 (-)
G66410 LOC107687112,LOC107595766 other upstream 752362 23576953 ~ 23583368 (-)
G66451 LOC107595774,LOC107733967,LOC107748958,LOC107693424 other upstream 833474 23658065 ~ 23663536 (-)
LOC122350426 NA other upstream 995909 23820500 ~ 23821991 (-)

Expression


Co-expression Network