si:ch211-158d24.4


Basic Information

Item Value
gene id si:ch211-158d24.4
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 18725783 ~ 18729136 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043246069.1
GCAGGTCTTGCATGAGCAAAGCAGGAAACGACACTGGATCGACTGGACTGTTTTCATAGCGCCGAAACTGCACGAGTGGGCTGTTTGTTTTGGgcgttgaaaaaaaaacacgtgggagacttatacatacatatatatagagagacagagagccgTCTGAGGGCATGGAGCGGCGCTCTTAACCTGTCCGTTATGGAGATGACAAACGAAAATGCAGCTTGTCGGTTCCACGCGGTTGTAATGGAGCCCGAAAGGCGTGTGAGGACAAAGTACCGCTCACTGCGGCGACAGGTGTGCCTCGTCCAGTCCATTAGCGCGCTCTTCTGCTTCGGCTGCTGCCTGTTCACGCTCCTCTATCACGCCTTCCCGCCGACCTTCAAGGAAAATGAAACCAGTGAGGCACCGACATTTGGGATGCAGTACCAAGGCAATGAATTGAATAGCAGAAAAGAAACGATCCCGACACAAAGAAACACTTTCACTTCTTTCACTCGCTTGACAGTTAAAAACCACGTCAAGTTCACTAAAGAAAAGGGATATGTGCCATGGATGTACACACCAGAGTACCTGTCACCAGGCCATACCAGATACTTCATCCTGGAAGACGATAATGAATCTCTCAAAGTCCTTAACGATGGAACGTACAAGATTTCTCTTCAGATCACATACAGAAATTTCAGTGAAGAGTCAGAGGAAATATCTCTGCAGCACGATATTCGTCATTATACCGACGCATACGGTAAATACCTGCCGCTGCTCACCCACTTGGAAGCAGTCAACCTCAAAAACTGGAGGAAAAGTCTGTTCTCTGAGGGTATTTTTTCTCTTAAATCTGGGGACAGACTCAAGGTATGGTCGGAGAACCTGAAGCTCATTGACGTTTCAGGGGTGATTTcacaaaaaacatcttttgtagCATATCCTCATTTTTGCACATGAGAGTACAGcgaatataaaatcaaaaaaggcCATTTCTTCTGTAGCTGCGCACAAAGATCAAAAGGGCTCCCGTGACATATCATATTCACCTGAGATGACCTTATCGTCTTAAACAGATTCTTCTTCTGTCAACAGAATGATTTGAATCTCAGATGTAATTTTGCTATAATCAATAGCGGAAGTATGCGCAGAAGAAAAGCCTTATGAAAAATACTGAGGTGCGGTAACGGTGTCGCATGCTAATACCAGGGCACTTTGACATCAACTTTTGTACTGAAAACCATTCCTTCCTGAAAGGTTTTTCAAGAACATCACGTTACATGTGCTTTTtggtattttctttttgtatgaGAAGACCGTTGTGCTTCACGGTCATTGGCTTGggtttttaaaaagttcaatTTTTTAAGCATCGCAACTACCGTAGAATTGCACAGTTGTACTTTGGTTGCATTGAAtttggtaaaaaatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatataaaaaaaaattgtatgcattCAAATGctgcatattataatatttatactaCTGTAATCTTATTGTATGcttttgtatgttttcattGTCTGATTAAGGTTCTGGGCTGTTAATGCAAAGTTTCCAGGTTCAGTAACATTACGGAGTGAAGTGAACGATCAATATCATGTATTGCTCCGTTCCCTAGTGTGTTTTTGGGGTGCATCGTGGGTGCTGTTATTGTAATTTGTAAGATAGAAGTTATTTTGTACCGAAAGGGTTTGCAATGACCAAATATGACCTAATTTGCATTAAAGATACTTTCATGTATTTGAATACGTCTTCATCATGACATTATTCTTTGACCATGACGAATCAATAAATACTATTACGTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043246069.1 True 1863 mRNA 0.40 4 18725783 18729136

Neighbor

gene id symbol gene type direction distance location
arpc5la arpc5la,LOC107571143,LOC107728439,LOC107550963,LOC107676626,LOC107753090,LOC108411248 coding upstream 46957 18675319 ~ 18678826 (+)
LOC122350979 LOC107728433,LOC107676613 coding upstream 53554 18663946 ~ 18672229 (+)
olfml2a olfml2a,LOC107657324,LOC107550966,LOC107554414,LOC107703179 coding upstream 74229 18634296 ~ 18651554 (+)
zgc:152830 zgc:152830,LOC107550967,LOC107657328,LOC107703177,LOC107554415,LOC107712486 coding upstream 110891 18608715 ~ 18614892 (+)
dusp2 dusp2,LOC107657330,LOC107712482,LOC107550972,LOC107554416,LOC107703175 coding upstream 269244 18453576 ~ 18456539 (+)
si:dkeyp-14d3.1 si:dkeyp-14d3.1,LOC107676622,LOC107728438,LOC107659267,LOC107550917,LOC107753136 coding downstream 32511 18761647 ~ 18941677 (+)
glt1d1 glt1d1,LOC107676618,LOC107659266 coding downstream 267333 18996469 ~ 19023292 (+)
LOC122351071 slc7a4 coding downstream 352461 19081597 ~ 19090260 (+)
LOC122350065 pold2,LOC107747204 coding downstream 371170 19100306 ~ 19103847 (+)
LOC122350746 pqbp1,LOC107702814,LOC107683912,LOC107747222 coding downstream 375917 19105053 ~ 19106870 (+)
G64910 NA non-coding upstream 51439 18673967 ~ 18674344 (+)
G64889 NA non-coding upstream 107599 18616978 ~ 18618184 (+)
G64878 NA non-coding upstream 274419 18451042 ~ 18451364 (+)
G64862 NA non-coding upstream 334572 18390674 ~ 18391211 (+)
G64858 NA non-coding upstream 358673 18366570 ~ 18367110 (+)
G65073 LOC107564452,LOC107733255,LOC107755688,LOC107702821,LOC107733264,LOC107668424,LOC553487,LOC107564453 non-coding downstream 282797 19011933 ~ 19234600 (+)
G65094 NA non-coding downstream 320146 19049282 ~ 19212125 (+)
G65108 NA non-coding downstream 454554 19183690 ~ 19347044 (+)
G65074 NA non-coding downstream 495433 19224569 ~ 19233384 (+)
G65119 NA non-coding downstream 676520 19405656 ~ 19482043 (+)
si:ch211-158d24.2 si:ch211-158d24.2,LOC107550960,LOC107703181,LOC107676623,LOC107728434,LOC107571139,LOC107753137 other upstream 3537 18695454 ~ 18722246 (+)
gpat2 gpat2,LOC107712449,LOC107550920,LOC107657318 other upstream 125299 18565699 ~ 18600484 (+)
adra2b adra2b,LOC107712484,LOC107657329,LOC107554404,LOC107753091,LOC107550971,LOC107703147 other upstream 261236 18460051 ~ 18464547 (+)
sb:cb288 NA other upstream 301978 18418948 ~ 18423805 (+)
lrrc75ba lrrc75ba,LOC107712478,LOC107753104,LOC107703167,LOC107554425,LOC107687975,LOC105891565,LOC108414797 other upstream 440822 18258220 ~ 18284961 (+)
G65100 sf3a1,LOC107564451,LOC107550953 other downstream 365811 19094947 ~ 19096071 (+)
G65105 LOC107747205,LOC107550912,LOC107683889,LOC108412149 other downstream 390808 19119944 ~ 19152305 (+)
LOC122350733 LOC107702875,LOC107722994,LOC107591954,LOC107573969,LOC107722996,LOC107691581 other downstream 470852 19199988 ~ 19201687 (+)
pqbp1 pqbp1,LOC107702814,LOC107683912,LOC107747222 other downstream 542956 19272092 ~ 19273770 (+)
rfk rfk,LOC107740987,LOC107723557 other downstream 1300898 20030034 ~ 20033607 (+)

Expression


Co-expression Network