ccdc157 (ccdc157)


Basic Information

Item Value
gene id ccdc157
gene name ccdc157
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 19257900 ~ 19261825 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043246099.1
atGGCTCATTTGTTAGGTAGTCAGGACTGTATCGACAGTCTTCGCAGAGATCTTATTGATTTACAGGGAGCGCTTCTGGACGTATTTTCCAAGACTGGACCAGTCCGTTTTCCATCGTGGAAGTTTCCCGATAAACTATCATGTAACCTGGACTTGGTGAGGCTTTTAGAAGAGTATGATTATGTGGATGGCGATGAAGAATTCAGTCAGCACTCGCATATAGTCCTGCAAGAGTTGCTGATTGACAGATTAATGCTTCTTCTCCAGAGTTTTAACATTCACGCTGAGCTGTGGCTTGAAAATCAGAACGCTTCATCCTCTGAACAGAATGAAATCTCTGTTTCCATCGGCCCTGTGGTCAAACACTACTGGAGGAACCTTCTTCAGCTCAGCAGTCAACAAACACAAGAGAGAAAAAGTAATGGACAGCCACCTCCAACTCATTCCGGAACAGCAGCGAAAACTCCTTCCATGACCAGCATCCGTGAAACCAGCACAAATAGCTCAGCTTCAACTCCCCAACACGAGAGAGTGTCCGCCGCAGGCTCCTGCGTGTCTGCTCACACCGTAGGCTGTCAGACCGTAGAGTCCGCCCTGCTGCCCTGTGAGGCCTGCGCTTGCGTTCAGGCGGTCATGAAGGAGAGCAGTGACGCTCTAGTGTCTTTGTGCCAGTCTCTGGGTTTGCCTTGCTCCATGCAGGGCTTCCTGGAAGCTGTGGAGGAAACGCAGCAGCTGGGCCGCTTGTCTGCGTGTGATATTTCCCAATGGGCAAGTGAGCAGCGTAGAGATTTGAGCCGCGTGGGAAAACACGTCCTCGAGGTGAGAGAGCCGCTGAAAAAGAAgctgaaagagacagagagtgagagagagaggctgagaAAACAGCTGTCAGAGATGGCCAAAAGAGAGAAGGAGGATAGGAGGAAGACGGAGGAGGAGTGGGAGCGCAGAATGCAGGAGGTGAAATCCAAGGGAGAGGAAGCAGAAAGGAGGCTGAAAGAGGAGAAGGAGGATTTAAAGAAAGGCGTGACATTGTTAGCAGACCGAAATTCTGAACTCATGGCAGAAGTGAATTCGCAAACAGAAGTAAAACAGAGTCTTGAATTTGAGAGGAGTGCACTACAGGAGGAAGTTCATCGTCTGCTTTCACTAGAGACCGCGTtaagagaggaagaggagagcaGGCAAAACCTGGAGAAGGAGCTCAGAAGTACACAGACTCTGTTGAGCAAAGAGAGTGCCAAGAGCCACAGTCTTCAACGCCAAcatgagGCGCTTCAAGTGAAACAGGCAGCTCTGCGTAAGCATCTGGACGTGCTGGTTCAGCAGACTGAAGATCTGCATAGCAGTCTGGAAGAATGTGAGGATGAAAAAAACGATCTTGCCAACAAACTCACACAGATCATTCAAGAAAAAGATGCACTTCAGGAGCAACTTACACAGCAGCAGTCCCAGTGTAGTTTGCTGAGTACTGAGAAACAGAAGAAGCAGACACAGATCACAGAACTGGAGGAGAGAGCGTCTCGACTGAAAGAGATGCTTGAAGACGCCACCCAGAGAGAGAGGTTACTGGTGGCCTTTCCTGAGCTCAACCCACAAGCAGCACCCCAGACTACAGGTGATGTGATGTGTGATATGGAGCAGCAGCTGAAGGCAAACTCATTGAGGATCAGGATCCTGCAGCAGGAGAACAGCACCCTGAGTAACAGTCTAGAAAGACTGAGGGACCACGAGAAGAAACAAAGGTCTTCAGATTCTGGGATAACTGAGATGGACAGAAGCGGTGAAGCTCCAGCGATGGGAACCTCAGACAACTCTAGCACCCCTTCAACAGCCTGCTCTCGCTCCTCCCCTTCATCCGCTCTTCATCACCAGACTCTCCACCTCTCTCTGCATCAAGATGTGGAAGAAAGGTACATGAATATCCGCAGCACTACTCGCAGCCGGTCTGCAGGCACACGTCGCAGAAGGAAATGAGGTCGCTTAGGGAACATATCGGTCCGAAGATTTAGACATTCTTCTGACTTATGTGTTTTATTGGACAGCACGCATTTGAATGTATAAACATCTCTAAAGCCAAGCGTCTTCTGGATTATAGCGGACACAATGCTGTTATCAAAAGTCCCGGACAACTTAATGCTAAAAAATCTGACACGTGCACATTTGTACATTTAGACACTAAAAAAAGGATATTAGAAGCCCtaccaataaaaaaataaaaaaacattgaactttaaattgatttcattttttattttcttcatgaaTCGCTAACCTCTAAACCTTATGACATTTACTCAGTTCTGTGTGACACCTGTGTGCCTTGAGCATTAG

Function

symbol description
ccdc157 Orthologous to human CCDC157 (coiled-coil domain containing 157).

NR:

description
PREDICTED: coiled-coil domain-containing protein 157

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043246099.1 True 2334 mRNA 0.48 9 19257900 19261825

Neighbor

gene id symbol gene type direction distance location
LOC122349957 LOC107668424,LOC107564453 coding downstream 23243 19232671 ~ 19234657 (-)
LOC122349953 LOC107564452 coding downstream 28030 19225286 ~ 19229870 (-)
LOC122349956 LOC107564454 coding downstream 39265 19216045 ~ 19218635 (-)
LOC122349954 LOC107564459,LOC107659264 coding downstream 42437 19212581 ~ 19215463 (-)
LOC122349926 gpkow,LOC107683890,LOC107702823,LOC107575438 coding downstream 138838 19111023 ~ 19119062 (-)
gpkow gpkow,LOC107683890,LOC107702823,LOC107575438 coding upstream 13131 19274956 ~ 19283441 (-)
LOC122350099 renbp,LOC107747208,LOC107683888,LOC107702837,LOC107725049 coding upstream 162167 19423992 ~ 19428532 (-)
zgc:162200 zgc:162200,LOC107683887,LOC107702829,LOC107747207,LOC107724826,LOC107570514,LOC107550908 coding upstream 172204 19434029 ~ 19449741 (-)
rbm39b rbm39b,LOC107683885,LOC107747212,LOC107550952,LOC107570509,LOC107725799 coding upstream 219442 19481267 ~ 19492499 (-)
rh50 rh50,LOC107724755,LOC107570510,LOC107702833,LOC107683883,LOC107550951,LOC107747214 coding upstream 232312 19494137 ~ 19499408 (-)
G65180 NA non-coding downstream 870 19086572 ~ 19257030 (-)
G65194 slc7a4 non-coding downstream 7216 19081648 ~ 19250684 (-)
G65175 NA non-coding downstream 261207 18965288 ~ 18996693 (-)
G65157 NA non-coding downstream 528758 18727777 ~ 18729142 (-)
G65055 NA non-coding downstream 562550 18695050 ~ 18695350 (-)
G65217 sf3a1,LOC106585510 non-coding upstream 912 19262737 ~ 19263305 (-)
G65244 NA non-coding upstream 144930 19406755 ~ 19409040 (-)
LOC122349935 NA non-coding upstream 446272 19708097 ~ 19744650 (-)
G65596 adamts13,LOC107725310,LOC107548275,LOC107702807 non-coding upstream 841512 20103337 ~ 20104000 (-)
LOC122350956 NA non-coding upstream 874778 20136603 ~ 20140200 (-)
LOC122351133 NA other downstream 55523 19202277 ~ 19202377 (-)
LOC122350102 LOC107717958,LOC107676625,LOC107550916,LOC107682323,LOC107659265 other downstream 209931 19023713 ~ 19047969 (-)
G65033 NA other downstream 697566 18559667 ~ 18560334 (-)
tbc1d10aa tbc1d10aa,LOC107657331,LOC107712481,LOC107550973,LOC107753095,LOC107703173,LOC107554420 other downstream 855962 18390663 ~ 18401938 (-)
G64967 NA other downstream 1100357 18155135 ~ 18157543 (-)
si:ch211-218o21.4 si:ch211-218o21.4,LOC107550930,LOC107702847,LOC107727198,LOC107747209,LOC107683911 other upstream 166913 19428738 ~ 19433291 (-)
zgc:154046 adamts13,zgc:154046,LOC107702807,LOC107548275,LOC107722731,LOC107702859,LOC108426726,LOC108265337,LOC107740996,LOC107565124,LOC107691587 other upstream 856182 20118007 ~ 20134345 (-)
LOC122350560 ppia,LOC107566959,LOC107756826,LOC107722982,LOC107591936,LOC107691583 other upstream 1153240 20415065 ~ 20421296 (-)
LOC122350336 LOC107714596,LOC107556216,LOC107698089 other upstream 1457115 20718940 ~ 20723155 (-)
gna14a gna14a,gna14,LOC107698092,LOC107678467,LOC107556222,LOC107721075,LOC108426707,LOC108265545 other upstream 1753168 21014993 ~ 21025831 (-)

Expression


Co-expression Network