LOC122349950 (adra2b,LOC107712484,LOC107657329,LOC107554404,LOC107550971,LOC107753091,LOC107703147)


Basic Information

Item Value
gene id LOC122349950
gene name adra2b,LOC107712484,LOC107657329,LOC107554404,LOC107550971,LOC107753091,LOC107703147
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 19196450 ~ 19200081 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043246102.1
TAAGCCGACTTTCAACACTCAGGAATGTAACAACGACACAACTACACCAGACTCCGTCATTTATCAGGGCAGCTGTCGCGCTTAAATTCTTTTCGCAAACTTGTGAAAACTGTGAGGGGAAACTGGCACATCGCCGCGCGCTGCTGCGTGCTCTCTggagatttatatttaaagccttTTGCTCCGCGGAGGCTCGCGCATCTGGGTAACCTAGATTTAAGCATTCcagtatatttgttttgtaagcGCTTGTTAAGGATTCCGAACGTTATTTTTTATGCCTGATTTGAACTTTagaatatgtaaaatgttaaaagcgAGTAATTGTTACTCTAATCATTTATGGAAGCACAACATTGCGCAGCTTTTTCGTATGGGAAATTAATCGATCTGTGGCAACACGGCTTGTATTTCTGCTTCGGTTCTAgtcgtttttgtttgttttgtttcagtttttcccCTCACGTTATCTGtcgtctataaaaaaaaaacattctgaagtTGATCATTTACTGAAAGAGCTGTAAATTCTAGGTTTATCCGAACCgtacattataattaaatatatggaGCCTATCCGACATTTTATTAATTCGATGCCTGCCTTTTAAATTAAGTTGCGCTTTTCCATAATTATCCCATAACCCAGATGACGCTTTTTGCAAATTTGACGCAAAGTAATAAACCTCGACGAGATGTGACAGAACAATGGCTCACGGAATCTTTAGCTCAGTGAACAATGTATTCATTCGTTTCTACGTAAGAtcgtttatttaatttcagacGAACATATTTTACTAcgttatattacaaaaaaagagagactatTCAATTTATTCTGGCCACATTCGGATTACTAATAGAGACGATTAGTCCACGTGCTTCAACCTCAGTTGCCGCGCTTTGGCAGTCATGGCAAGCGCGTGCTCTACCGGCACGGGTCTGCATGGCCACAACATCAACGGCACCGGAGGCACGTCTTCACCGACTTGTAACCAGAGCATGATAAAACTCCCTCCGTACACTCCAGAAGCCACAGCAGCCTTTGCAACGGCCATCACGTTGATGATTCTTATCACAATAGTTGGCAATATCCTGGTCATCATTGCTGTTTTAACCAGCCGCTCACTGCGAGGACCCCAGAACCTCTTCTTGGTGTCCCTCGCGGCTGCGGACATTCTGGTAGCCACGCTCATCATCCCATTTTCACTGGCCAATGAACTAATGGGCTACTGGTATTTCCGGTCCGTGTGGTGTGAGATCTACCTGGCGCTGGACGTGTTGTTCTGCACTTCTTCCATAGTACACTTGTGCGCCATCAGCCTAGACCGATACATGTCCATCTCGCGCGCCGTCACGTACGGCGCACAGCGGACGCCCAAACGCATCAAATGTGCCATTTTGGTGGTGTGGCTGATCTCAGCAGTCATCTCCTTTCCACCGCTGCTCTCCATGAACAAGAACAAAGGTGGCGCCGATTCGGGTGGGCTGCCACAGTGTGAGCTCAACAACGAGCGCTGGTACATCCTGTACTCCACTATCGGTTCCTTCTTTGCTCCTTGTCTGATTATGATCTTGGTTTACATGCGGATCTACCAGATCGCCAAGCAGCGCACGCGGTGTCCTCCAGGGGAGCCCCGCAAAGAGGTCCCGGCCAATGCCGCAAACCCACAGCACAAGGTCCACACGGAGGGTCTACAAAACGGAAGAGGCGACGAAACGCCCTCAATCTTGCAGAAAAAACCCAGGCCTCCAACTCTGGCCGTGTCCCAAGTGGAGTCCGCCCAGCAGGCGGCGAGCCCCCCAATCTCCAACAAACACCTGCAAGCCCCTTCAACGGCCCTGACACCGACCACCCCGTGCCCCTCACCGTCTCCCTCGAATTCGTCCGAAATGGCTCCTAATAAAGCCAAAGGGGGGAAAAAGGCGAAGAAGGCCATGAAACTGCCCGACAATAATAACGGAGAGAGCATGAGCTCAGACTCGGACACAGAGCAAGGTGGAAGGGGGCTGGAGGTCCCGTGCACCCCAGGCGTGACGCCCAGCGGCATCCATTCTCCGGCCACCATACAGAAATACAGAGACATGATTGCCACCGCCAAAGGTGCCAAGCTAGTGACCCGGAAGACGAAGCAAGAAGGAACGCCCAACTCCGCACGCCGCAAAGCCATGGTGAACCGAGAGAAGCGCTTCACCTTCGTGCTGGCGGTGGTGATTGGCGTCTTTGTCATCTGCTGGTTCCCTTTCTTCTTCTCGTACAGCCTACAGGCTGTGTGCCCGGAAACCTGCACCCTGCCCGAGCCGCTCTTCAAGTTCTTCTTTTGGATCGGCTACTGCAACAGCTGCCTAAACCCGGTCATCTACACCATCTTCAACAAAGACTTCCGCAGAGCCTTCAAAAAGATCCTCTGCAAGAACACCAAAGGCACATTCTTCTGAAGCTCCTGAGGTGGATCCTCTCCCCTTATTCAGAACACAGACTAAAAGAAGCACAATAACAGTGCTGTTGCGAAGTAAACGAAGGGCTTTTTGTGCTGCCCGGTGCACTGAGGACACCATGCTACTCAAATGACTCCAGGTTACTGGATTCCTGGTATTTGTGTTATAAAATGGGGCTAATCCAAAAATATTCACAGACTTTGACAAATCAaggctgaacacaaaagaacttACTGGGACTATCGCACACCTGCAAGGACAACGACACGGAGGTCGGTTACAAAGGTTATTGtatcttttctgttttctgttatcTCGCCTTTCTACGAACACCAGAGCTTGGAGATACTGCAAGCGCGGATTTCTCTAAGGATTTCAGAGGTACACCATTCAGAATCTTTACGTACAGCTTTTCCATGCTGACTGGTCTACCAATGCCTACACAGCATTACTTCTGAGGAACAAAGACGTGAAATGCTCCTGTGGAAATCCTTGCCAGGGGCGATGTGTATGAAAAGAGCTGACGCAAGTCTCTCCGATCGAACGTTAAGGCTTCTAGTTACAGATCCCCCTCCAGTGTAAGACCACTGAGGAGTTTTTCTGCCATGCTGTGAGGCAGAAAGGCTCTGTGAATACAGAACACCTGTCACGGATGGAAGCCTTTCTGTCTCTTTGCATCTTGGACTGGTTGCCAGCAGGCTTTAAGATGGCAAAATGTTTATTACGAGAACTTAATATGTGTATTCGTAtcaaaagtcattttcatttttaaaatgataagacTCTTTGCGTCGTCCAAAATGACTTGAGACTTTTTGGTGACTGCATCATATGACACAAACACCTCCTGAGGTGCTCTTTCTGACTTGGTTCAGCACTTTTCTTTGTATAAAAGAACAAACGATCATTTGTTGGTGTACACTGATCTACTGCACCCTAAATGTCTGAGCATTCAGCAGGGTGATACTTTGGGACTAAGGGCTGATAGCAGtgatgctttctttttctttggtcATTGTCTTTTTGCTAATGAT

Function

symbol description
adra2b Enables alpha2-adrenergic receptor activity. Involved in adenylate cyclase-inhibiting adrenergic receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of plasma membrane. Is expressed in several structures, including digestive system; eye; heart; integument; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in diabetic neuropathy; hypertension; myocardial infarction; obesity; and type 2 diabetes mellitus. Orthologous to human ADRA2B (adrenoceptor alpha 2B).

NR:

description
PREDICTED: alpha-2B adrenergic receptor

GO:

id name namespace
GO:0019229 regulation of vasoconstriction biological_process
GO:0007194 negative regulation of adenylate cyclase activity biological_process
GO:0006940 regulation of smooth muscle contraction biological_process
GO:0030168 platelet activation biological_process
GO:0071875 adrenergic receptor signaling pathway biological_process
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004938 alpha2-adrenergic receptor activity molecular_function

KEGG:

id description
K22814 Octalpha; octopamine receptor alpha

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043246102.1 True 3473 mRNA 0.48 2 19196450 19200081

Neighbor

gene id symbol gene type direction distance location
LOC122350746 pqbp1,LOC107702814,LOC107683912,LOC107747222 coding upstream 89580 19105053 ~ 19106870 (+)
LOC122350065 pold2,LOC107747204 coding upstream 92603 19100306 ~ 19103847 (+)
LOC122351071 slc7a4 coding upstream 106190 19081597 ~ 19090260 (+)
glt1d1 glt1d1,LOC107676618,LOC107659266 coding upstream 173158 18996469 ~ 19023292 (+)
si:dkeyp-14d3.1 si:dkeyp-14d3.1,LOC107676622,LOC107728438,LOC107659267,LOC107550917,LOC107753136 coding upstream 254773 18761647 ~ 18941677 (+)
slc7a4 slc7a4,LOC106579925 coding downstream 49640 19249721 ~ 19256112 (+)
sf3a1 sf3a1,LOC107550953,LOC107564451 coding downstream 61860 19261941 ~ 19267105 (+)
pold2 pold2,LOC107747204 coding downstream 67271 19267352 ~ 19270870 (+)
LOC122349946 LOC107747205,LOC107683889,LOC556872 coding downstream 84636 19284717 ~ 19346575 (+)
iqsec2b iqsec2,LOC107747221,LOC107683900,LOC107702804,LOC107570507,LOC107550910,LOC107725888 coding downstream 147821 19347902 ~ 19405484 (+)
G64910 NA non-coding upstream 522106 18673967 ~ 18674344 (+)
G64889 NA non-coding upstream 578266 18616978 ~ 18618184 (+)
G64878 NA non-coding upstream 745086 18451042 ~ 18451364 (+)
G64862 NA non-coding upstream 805239 18390674 ~ 18391211 (+)
G64858 NA non-coding upstream 829340 18366570 ~ 18367110 (+)
G65074 NA non-coding downstream 24488 19224569 ~ 19233384 (+)
G65119 NA non-coding downstream 205575 19405656 ~ 19482043 (+)
G65111 NA non-coding downstream 223938 19424019 ~ 19425722 (+)
G65267 NA non-coding downstream 357463 19557544 ~ 19558486 (+)
G65268 NA non-coding downstream 358792 19558873 ~ 19559169 (+)
G65105 LOC107747205,LOC107550912,LOC107683889,LOC108412149 other upstream 44145 19119944 ~ 19152305 (+)
G65100 sf3a1,LOC107564451,LOC107550953 other upstream 100379 19094947 ~ 19096071 (+)
si:ch211-158d24.2 si:ch211-158d24.2,LOC107550960,LOC107703181,LOC107676623,LOC107728434,LOC107571139,LOC107753137 other upstream 474204 18695454 ~ 18722246 (+)
gpat2 gpat2,LOC107712449,LOC107550920,LOC107657318 other upstream 595966 18565699 ~ 18600484 (+)
adra2b adra2b,LOC107712484,LOC107657329,LOC107554404,LOC107753091,LOC107550971,LOC107703147 other upstream 731903 18460051 ~ 18464547 (+)
pqbp1 pqbp1,LOC107702814,LOC107683912,LOC107747222 other downstream 72011 19272092 ~ 19273770 (+)
rfk rfk,LOC107740987,LOC107723557 other downstream 829953 20030034 ~ 20033607 (+)
timm17b timm17b,LOC107722912 other downstream 935038 20135119 ~ 20139364 (+)
LOC122350816 slc18a1,LOC107702874,LOC107722997,LOC107591929,LOC107756821,LOC107566956 other downstream 1223200 20423281 ~ 20431832 (+)
rnf122 si:ch1073-392o20.1,rnf122,LOC107747807,LOC107678386,LOC107698113,LOC108440685,LOC107563167 other downstream 1758519 20958600 ~ 20972040 (+)

Expression


Co-expression Network