LOC122349997


Basic Information

Item Value
gene id LOC122349997
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 1710358 ~ 1714221 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043246173.1
AAGACTCAAGTCTCATGTCAGCATGAATCAGCTTTATATCCTTTTATTGGTCCTTTGGTCTGCTGTCAGTAAgtggattttatttgtttgccacAGATTTTGTGTGTACCTGCTATATGTATGGGGTGGATAGaagtaaatgcaatttttgttcAGGTTCGTCTGATGTGTGGGAAGAATATGAAAATACAACAGATccatggtttattttttttcagGGACAAGACTATTCcgaatattattatgattatacatCAAACAAAGATATGATCTACACAACGACACAAAAAGAGTCCAGTGACCTGTTTGAAGaTATCCCAGAGCCCATCATCACAGTGTACAGACAGCAGGAGGACGGGGAGgttgtgtttgtgctgtgcaaGTTCACCTCAGTGCCTGGAAGGAGATACAGAAGACAGTCTTTTAAGCTGTCTGTGGAGAGTGAACTAAACTACACCATGGAAACATTCAGAAACCCTTCTTTAGATTCTTTAGAGATACTTGTGTATATGGTCACCGTGAGTCCACCTGCTTCCTTCACCTGTGTGCATGAGGTCGATTTTTATGTAGATGTCAGGAACGTGAGCAGCCAGGCCTACAATTACAGTGTTTCAGTCTCGGATCTTCACGGAGGAGGAGTATCTTTGTTATACGTCTGCTTTTCTTCCTTCATTGCTGTTGGTCTCTTCATCTTGATTGCAGCAGTGATTGTGACCAACATCAGGAGCAAAACTAAAGACACCGACTCCACAGCAGTTACCGACAATGACTACACAGAAGTGTAAAAATCACTTtaagaagagaagagaacaggcatgaagaaaaacaaaaaacatataaatgaaaaatataattgttataaCCCATGACTAGGGGTGCACATAAGTGGTATGCAGATAAACATATGGGCTGTATACATTCAGACCACTCATGGTTGACAGATGTTAATGCATAAATACCATTATTACTGTATAAGATTTGCATTCAAACTTGAATCAAGGTTAAGCACAGATTTTTCAAAGAGCAAAACTAAGATTTTATACACTGACGCTCCTCAGTTGGCAGCTCATATACTTACCTGCCGGCAACCCATCAAAAAAAACCTTCTGATTTTAAGTTTGAAAATATATGACTCAAATattagcactttattttaagtttagtaatatttaaaaaaatctagtaTTATAGTGAATAAAGTATTATCAcgctttattgttttatttgatttttaaataagtgtaaataaagtacaataaaattactgtcacttttatttgtttatttttatagttatatttaaaaggGCAGACCATGTTCAGTGAAAACCAAACCAAGTCTCCAGGTGAACTCATGTGCACCCCTGCTTATATCCacaatctttacatttttattttagttttagttttttgtttgtttagttgttttttgctTATGCTGTAGCATTCCTcatttgtttgttatataaaaataactgattctgttactgctgtttttttttttacttttctgaagctttgctttg
>XM_043246174.1
TCAAGTCTCATGTCAGCATGAATCAGCTTTATATCCTTTTATTGGTCCTTTGGTCTGCTGTCAGTAAgtggattttatttgtttgccacAGATTTTGTGTGTACCTGCTATATGTATGGGGTGGATAGaagtaaatgcaatttttgttcAGGTTCGTCTGATGTGTGGGAAGAATATGAAAATACAACAGaTATCCCAGAGCCCATCATCACAGTGTACAGACAGCAGGAGGACGGGGAGgttgtgtttgtgctgtgcaaGTTCACCTCAGTGCCTGGAAGGAGATACAGAAGACAGTCTTTTAAGCTGTCTGTGGAGAGTGAACTAAACTACACCATGGAAACATTCAGAAACCCTTCTTTAGATTCTTTAGAGATACTTGTGTATATGGTCACCGTGAGTCCACCTGCTTCCTTCACCTGTGTGCATGAGGTCGATTTTTATGTAGATGTCAGGAACGTGAGCAGCCAGGCCTACAATTACAGTGTTTCAGTCTCGGATCTTCACGGAGGAGGAGTATCTTTGTTATACGTCTGCTTTTCTTCCTTCATTGCTGTTGGTCTCTTCATCTTGATTGCAGCAGTGATTGTGACCAACATCAGGAGCAAAACTAAAGACACCGACTCCACAGCAGTTACCGACAATGACTACACAGAAGTGTAAAAATCACTTtaagaagagaagagaacaggcatgaagaaaaacaaaaaacatataaatgaaaaatataattgttataaCCCATGACTAGGGGTGCACATAAGTGGTATGCAGATAAACATATGGGCTGTATACATTCAGACCACTCATGGTTGACAGATGTTAATGCATAAATACCATTATTACTGTATAAGATTTGCATTCAAACTTGAATCAAGGTTAAGCACAGATTTTTCAAAGAGCAAAACTAAGATTTTATACACTGACGCTCCTCAGTTGGCAGCTCATATACTTACCTGCCGGCAACCCATCAAAAAAAACCTTCTGATTTTAAGTTTGAAAATATATGACTCAAATattagcactttattttaagtttagtaatatttaaaaaaatctagtaTTATAGTGAATAAAGTATTATCAcgctttattgttttatttgatttttaaataagtgtaaataaagtacaataaaattactgtcacttttatttgtttatttttatagttatatttaaaaggGCAGACCATGTTCAGTGAAAACCAAACCAAGTCTCCAGGTGAACTCATGTGCACCCCTGCTTATATCCacaatctttacatttttattttagttttagttttttgtttgtttagttgttttttgctTATGCTGTAGCATTCCTcatttgtttgttatataaaaataactgattctgttactgctgtttttttttttacttttctgaagctttgctt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043246173.1 True 1525 mRNA 0.35 6 1710358 1714221
XM_043246174.1 False 1401 mRNA 0.36 4 1710360 1714216

Neighbor

gene id symbol gene type direction distance location
LOC122350659 NA coding downstream 63996 1627653 ~ 1646362 (-)
dtx1 dtx1,LOC107692206,LOC107671029 coding downstream 186894 1494505 ~ 1523464 (-)
LOC122350264 dgcr6,LOC107572069,LOC107721026,LOC105899531 coding downstream 255828 1447000 ~ 1454530 (-)
pym1 LOC107701384 coding downstream 457842 1250060 ~ 1252516 (-)
LOC122350094 NA coding downstream 461994 1244834 ~ 1248364 (-)
LOC122350661 NA coding upstream 57761 1771982 ~ 1777474 (-)
si:dkey-178e17.3 LOC107754395,LOC107671045,LOC107657210,LOC107722861 coding upstream 122902 1837123 ~ 1852539 (-)
si:dkey-178e17.1 slc25a1,LOC107754397,LOC107670994,LOC107657208,LOC107722854,LOC108412497 coding upstream 143699 1857920 ~ 1878899 (-)
cltcl1 LOC107559593,LOC107670971,LOC108412499 coding upstream 166517 1880738 ~ 1926722 (-)
si:dkeyp-117b11.1 LOC107670989,LOC107657213,LOC107754414,LOC107722857,LOC107560032,LOC107559594,LOC107559561 coding upstream 213508 1927729 ~ 1936872 (-)
G60207 NA non-coding downstream 15538 1674474 ~ 1694820 (-)
G60214 NA non-coding downstream 26318 1673516 ~ 1684040 (-)
G60209 NA non-coding downstream 38592 1661489 ~ 1671766 (-)
LOC122350072 NA non-coding downstream 43369 1664302 ~ 1666989 (-)
LOC122350074 NA non-coding downstream 50366 1657738 ~ 1659992 (-)
LOC122349999 NA non-coding upstream 3180 1717401 ~ 1765543 (-)
G60204 NA non-coding upstream 12004 1726225 ~ 1780353 (-)
G60237 NA non-coding upstream 135267 1849488 ~ 1849933 (-)
G60471 NA non-coding upstream 273552 1987773 ~ 1988553 (-)
G60473 NA non-coding upstream 277114 1991335 ~ 1994745 (-)
LOC122350657 pi4ka,pi4kab,LOC107671001,LOC108440297,LOC107698013,LOC107722847,LOC107559589 other downstream 103749 1561546 ~ 1606609 (-)
G60220 NA other downstream 129742 1576805 ~ 1580616 (-)
LOC122350266 dgcr6,LOC107572069,LOC107721026,LOC105899531,LOC103029434 other downstream 353405 1349171 ~ 1356953 (-)
commd10 commd10,LOC107728250,LOC107663591 other downstream 551072 1140698 ~ 1159286 (-)
G60098 NA other downstream 572206 1135401 ~ 1138152 (-)
pi4kab pi4ka,LOC107574565,LOC107671001,LOC107722847,LOC108440297 other upstream 18643 1732864 ~ 1821650 (-)
LOC122349998 sh3glb2b,LOC107748508,LOC107681863 other upstream 34841 1749062 ~ 1762549 (-)
c8h22orf39 si:ch211-51h9.6,LOC107699642,LOC107560060,LOC107670995,LOC107753003,LOC107754424,LOC107559584 other upstream 345173 2059394 ~ 2061481 (-)
LOC122351111 LOC107568007,LOC107754426,LOC107670998,LOC107699638,LOC107560048,LOC107753005,LOC105014160 other upstream 417148 2131369 ~ 2162003 (-)
G60564 pxnb other upstream 746710 2460931 ~ 2464371 (-)

Expression


Co-expression Network