LOC122350049 (LOC107748126,LOC107553823,LOC107687983,LOC107549670,LOC107697074,LOC107697075)


Basic Information

Item Value
gene id LOC122350049
gene name LOC107748126,LOC107553823,LOC107687983,LOC107549670,LOC107697074,LOC107697075
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 17701512 ~ 17706491 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043246232.1
GACTACAGAGCAGTTTcacattcagattttaaaaaagaaacatggtCACGTCATGTCTTGTCCTTCTCTTGCTTTCAGTCCAGTGGTCCTGGGCTCAGGAAGACCCTCTTCTGCCTTTCTCCGAACACCTGGACCCAGAGCACAAGGTGCGTCTGAAGTGGGGATTTGATGAAATCCAGGGCACCATCTTGTTCGAGCTCACGGTCAACACCAATGGCTGGGTTGGTTTTGGCTTCAGCCCCAAAGGAGGAATGACTGGAGCCGATGTTGTCATTGGGGGAATTGGACCCGATGGCATTTACTTTAAGGACTATCATGCTGACGGGAATTCAATGCCTAAGGTTGACCAGCAGCAAAACTACAAACTCCTGTCTCTGACTGAGTCTGATGGGAAATCAGTCATGAGGTTTCAGAGGTCCATCGATTCCTGTGATAAAGATGATCTACCTATCACTGATCTCCCCATGAAGCTGATCTATGCGTACGGACAGACTGATGATATCACGTACCACAGTAACCAAAGAGGAACAAAGGAGCTGAACCTGTTGAAGTACATGCCTCACGTCAACCCTCCAAACAGCAGCTTTTTTGACATAACTATGGTCAATTTCACCGTACCAGCCAAGCAAACCCACTATCACTGCAAAATCATGAAGGCCCCTACTTTTGGTTCCAAACAACACATTTATCGTATTGAGCCAGTGATCGAAAACTTTGACATTGTGCATCATCTGCTGCTGTACAGCTGCCCTCCGACTGTGACGGAGCCGCAAGAGGCGGAGTGTTATACAGGAGTGGATGGAGAGTGCATGGAAGTCATAGCTGTGTGGGGAGTTGGTGGAGGGgCTTTTGAATTTCCTGAGGTGGCAGGACTTCCAATTGGGGGAAATGTTGGAGATTTGTTCTACAGGCTCGAAGTGCATTACAACAACCCCAATAAAAGTGCAGGTCGAGTTGATAACTCAGGTCTGCGCTTCCACCACACACCTGAACTCCGTCGGCACGATGCAGCTGTTCTGATGACAGGACTTGCGGTGGCCCCCGGGTACGCCATCCCACCCAAAGCCCAGTCCTTCCTCACGTACGGCATGTGTGACACGGCTAATATTCCAAAGGTTCTGGAGACGACACATGATCTTCAGGTGTTCTCTGCGATGCTGCACACACACTTGGCCGGGAGGAAGGTGCGAGTCGGACACTTCAGAGGGGGAGAACAGATCGATCTTCTAGTCGCGGATGAAAACTATGATTTTGAATATCAGGAAGTGACAAACTTTGGTAAAACTAAGACGGTGAAGTTGGGTGACAGATTGCTGGTGGAGTGCACCTATAACACTGAAAACCGAGACACGCTTACATGGGGGGGGTTCTCAACTACAGATGAGATGTGTTTGGCCTTCCTCTTCTACTACCCAGCTATGAATCTGAGCGGCTGTAGCAGCTTCCCTGATTCAAAGTCTTTACAATCTGCGATGGGAGCAGCAGATATCACATCTTGGCTCAATATAATGTTCACAAGGACTTGGGACGACACGACTATCAACGAATACCAGCAAACACTAAAGAGTATCGACCAGTACATCACAGTGGTGAACTCGCTCAACAACGCATCTTCTTATAAAGGGACACTTCCTGATCTCAAAGTCATCCCGCCTGCACCCTGCATAAGTGGCTGTGTGACCAGAAGTCTTGCTGCGCTATCTCTGCTCACATCTTTAACAGTGCAGTGGGCTTGCTTCTGAAACAGGAACCGAATGTCTGAACCATCAAGAGAACAAAAACTGAGCAAGCTATATGTAACCTTTTCCAATTAATAAACTTTGCACTTTACTTTCA

Function

NR:

description
PREDICTED: DBH-like monooxygenase protein 2 homolog

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016021 integral component of membrane cellular_component
GO:0016715 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen molecular_function
GO:0005507 copper ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043246232.1 True 1836 mRNA 0.48 13 17701512 17706491

Neighbor

gene id symbol gene type direction distance location
crybb2 crybb2,LOC107565327,LOC107753119,LOC107684510,LOC107553840,LOC107687964,LOC107748132 coding downstream 2097 17697175 ~ 17699415 (-)
slc23a2 slc23a2,LOC107753122,LOC107687958,LOC107684505 coding downstream 103665 17569420 ~ 17597847 (-)
rassf2a rassf2a,LOC107687959,LOC107553834,LOC107742747 coding downstream 133903 17552520 ~ 17567609 (-)
prnpa LOC107736233 coding downstream 158434 17540826 ~ 17543078 (-)
rflna LOC107687957,LOC107553832,LOC107684501,LOC107576363 coding downstream 236933 17456142 ~ 17464579 (-)
si:dkey-63d15.12 NA coding upstream 346868 18053359 ~ 18056277 (-)
asgrl1 LOC107580964 coding upstream 369106 18075597 ~ 18079483 (-)
si:ch211-170d8.8 LOC107712454,LOC107687991,LOC107550941,LOC107554434 coding upstream 373454 18079945 ~ 18082617 (-)
LOC122349911 LOC107569538,LOC107747839,LOC107694233,LOC107554410,LOC107703160 coding upstream 425003 18131494 ~ 18143145 (-)
LOC122351022 NA coding upstream 451806 18158297 ~ 18162389 (-)
G64757 NA non-coding downstream 36380 17661349 ~ 17665132 (-)
LOC122350842 NA non-coding downstream 40534 17657809 ~ 17660978 (-)
G64724 NA non-coding downstream 288640 17411009 ~ 17412872 (-)
LOC122350118 NA non-coding downstream 336002 17362169 ~ 17365510 (-)
G64634 NA non-coding downstream 656541 17044454 ~ 17044971 (-)
G64777 NA non-coding upstream 39194 17745685 ~ 17745924 (-)
G64942 lzts1,LOC107712471,LOC107687967,LOC107550927,LOC107554439,LOC107753115,LOC107703152 non-coding upstream 323044 18029535 ~ 18032726 (-)
LOC122350292 hnf1a,LOC107687971,LOC107550982,LOC107712475 non-coding upstream 389604 18096095 ~ 18103013 (-)
G64966 NA non-coding upstream 419694 18126185 ~ 18128804 (-)
G64992 NA non-coding upstream 578994 18285485 ~ 18285734 (-)
kcnip3a kcnip3a,LOC108440810,LOC107684506,LOC107553838,LOC107566017,LOC102307840,LOC108264878,LOC101482209,LOC103397788,LOC107753121,LOC107687962,LOC102210345,LOC108233759,LOC102228939,LOC102799407,LOC104951840,LOC102798027 other downstream 56001 17601258 ~ 17645511 (-)
LOC122350953 NA other downstream 300284 17320376 ~ 17401228 (-)
zgc:194007 NA other downstream 339662 17359385 ~ 17361850 (-)
LOC122350945 drd2b,LOC107745132,LOC107705176,LOC107691748,LOC107664308,LOC107600777,LOC107556418,LOC108428674 other downstream 604717 17046467 ~ 17096795 (-)
LOC122350093 NA other downstream 1291816 16407834 ~ 16409696 (-)
LOC122350290 LOC107569538,LOC107747839,LOC107554410,LOC107703160,LOC107694233 other upstream 400962 18107453 ~ 18112701 (-)
G64967 NA other upstream 448644 18155135 ~ 18157543 (-)
tbc1d10aa tbc1d10aa,LOC107657331,LOC107712481,LOC107550973,LOC107753095,LOC107703173,LOC107554420 other upstream 684172 18390663 ~ 18401938 (-)
G65033 NA other upstream 853176 18559667 ~ 18560334 (-)
LOC122350102 LOC107717958,LOC107676625,LOC107550916,LOC107682323,LOC107659265 other upstream 1317222 19023713 ~ 19047969 (-)

Expression


Co-expression Network