gck (gck,LOC107657322,LOC107550933,LOC107712466,LOC107753094,LOC107703174)


Basic Information

Item Value
gene id gck
gene name gck,LOC107657322,LOC107550933,LOC107712466,LOC107753094,LOC107703174
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 18408086 ~ 18417020 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043246238.1
TGCACCTCACACACGTTCGAACTTTAGCAAATCAACGCTCATCACACACTTGTTTGAAAAGACTTGCGAAGATGCCGTGCCTCACTTCAGCTCGTAGGCAGAGGATGCTGAGTGACTTTGAGTCAGTGCTGGAGAGAATTCTCATGGTGGACCAAATTCTGTCTGAATTTCTGCTGAGTAAAGAAGATCTAGAGGAAGTGATGAGGAGAATaaggagagagatggagaggggACTGCGAGTGGAGACACATGACGAAGCCAGCGTCAAAATGCTTCCCACTTATGTCCGCTCCACACCTGAAGGCTCCGAGGTTGGTGATTTCCTGGCGCTGGATCTTGGAGGCACAAACTTTCGAGTGATGCTGGTGAAAGTGGGTGAAGATGAAGAGCGAGGCTGGAAGGTGGAGACAAAGCATCACATGTACTCCATCCCTGAAGACGCCATGACCGGCACGGCTGAAATGTTGTTTGACTACATTGCCGGGTGCATATCCGACTTCCTGGACAAGCATAATCTGAAGCATAAGAAGCTTCCGCTGGGATTCACCTTCTCTTTTCCAGTCCGTCATGAGGATTTGGACAAGGGCATTCTGCTCAACTGGACTAAAGGCTTCAAGGCCTCTGGCGCTGAGGGCAATAATGTTGTCGGCCTACTGAGAGATGCCATTAAAAGAAGAGGGGACTTTGAAATGGACGTGGTTGCCATGGTGAACGACACAGTAGCCACCATGATCTCCTGCTACTATGAAGATCGCAGCTGTGAAGTCGGTATGATAGTAGGGACCGGCTGTAATGCGTGTTATATGGAGGAGATGCGTAaggtggagctggtggagggAGAGGAGGGGAGGATGTGTGTGAACACAGAGTGGGGAGCGTTTGGGGACAATGGCGAACTGGAGGACTTCCGGCTGGAGTACGACCGTGTTATTGACGAGACTTCACTAAACCCTGGACATCAGCTGTACGAGAAGCTGATTGGTGGGAAGTATATGGGCGAGCTTGTGCGTCTTGTGCTGGTAAAACTAGTGAATGAAAACCTGCTGTTCAATGGAGAAGCCTCAGACCTCCTGAAAACACGTGGAGCTTTTGAAACTCGCTTCGTCTCCCAGATCGAGAGTGACACGGGGGACAGGAAGCAGATCTACAACATCCTAAGCTGCCTGGGAATCCTGCCGTCGGAGCTGGACTGTGACGTTGTGCGTCTGGTCTGCGAGAGCGTGTCCACGCGCGCCGCTCACGTGTGCGGGGCCGGCCTCGCGGGCGTCATCAACCTGATGAGAGAACGCCGTTGCCAGGACGACCTGAAGATCACCGTGGGAGTCGACGGCTCTGTCTACAAACTACACCCTCATTTCAAAGAGCGGTTCCACAAGCTTGTGTGGGAAATGGCGCCTCACTGCGAGATTACCTTCATCCAATCAGAAGAGGGGAGCGGCCGGGGCGCGGCGCTCATTTCCGCTGTGGCCtgcaagatggccgcctgcatGCTGTCGCCGTGAAAAACGCGATTCGTTCTCGTTGGGCGGATTTCACGAGTCACGGCGGACCCGCAATGCTAGAGCGGCCTCTCCATGTGACGAAAGTGCTTTGCTCCTTTTCAACAGGAGGCTATGGGGTTGTTTGGCAACATCTATTAACCACAGCCCGCTGGAATGTTTAGCATGTGTGTTATTTTGTGCCATAAAGGCAAACGCTTGCAGTTAAATACGCTTTTAGACGCGACATACACCTTTTATTGTTAGCTATTGCAATGAGCACATTCAGGTAATGTTACATATACTTGCACCTTCATGGCATGGTTTGGAGAGGCGCGGAGGGACTAGATGCGTTTGTAAATATATGAACTGGTCAGGGTCAGCAAGGTAATTGTGCACTGtttattgcttgttttatttattgagttttaaattgtttatattcaGTGGTAATCAGaactgttaaattatttaatgcagaaCTTTAATATACTTTGTACGCGTGATTGACTGTTGTAAATAAACTTGCTGTACTATTAAA
>XM_043246239.1
AATGCTATGGCACATAAATGTTAGTGTTATCTTTAAAAGCTGATTTGATAAGAGGTTGCAGCAGTGAACTATGAATCTTTTGTTCTTGGCTATAAAAGGCAATCTAAGGGAGGCTTTGTATGGTCACATGAGCATTTTTAAGCTAAGCGTCAAATATGACATCTCATCTTTTGTTTATTATCATTGGACGATATAGTATTGCACCACAAGAATTTCTCTGCAATTCCATATTACAATACGAACTATGTCCTCTATACTGTATATGAAGATTAGAGTTAAACGAACGCATTGACTGTCACTCATTTTCACCAAACAAGACTCATACTCCTCCAATGTTTTCCTAAGTAATTTTGCCTCATTTAACAATTTCCCTTTGGGCACTTAACCAAGAGCAAGCAAAGTATTTTCCATATCAGTAGTGCGTGGTCCTCACAGATATCCAAGGTGACGAGTTTGCCACGGCAACAAGAAGCAGCCTGCGGTCTGAACTGGCGTAGAAGGAGACAGGTGTGGGtatttttctacaaaaataagAGGAGGAAACGGTCCTTCTGTTGCCTTAGTTACGGGGAGTCAGGAAGGGAGAAAATTATGAATGAAACCCTTTTTCCTCTGcagattattaatgtttaagaGGGTGAcgaaatcttgtttttttttaaagttaaaagtataGTCATCATCGGCTCAGACAGCTGTAGTGGCGCAAGGTAAGCCGGTCGAGCGTCCTTTGCTGGAACATCTCTCACGCCGGGACTGTGGTGACTTTCTGGAATGCAAACAGATTTAGGCTACAAAAATATTCATCTCTTCAGTCACGGATGACTGAAAATGGACCACACAAAAGACCGTCCGTTGTGACTGACTATTGGAATATCCGCAAATGACCATGAAGAAAGTCGGATAAGTCAAGCGACGCTTTATGTACATTCTTACATTTCATTTGAGCCAACTGCGTCAAGCCGTTGTTCAGAAAGACCTGAAGAAAACCTGCACCGcagatttttctttcaaatgatgCACCCATGAAGAGGACACACCATGGACCTTCATACCACGGATaagGTGGACCAAATTCTGTCTGAATTTCTGCTGAGTAAAGAAGATCTAGAGGAAGTGATGAGGAGAATaaggagagagatggagaggggACTGCGAGTGGAGACACATGACGAAGCCAGCGTCAAAATGCTTCCCACTTATGTCCGCTCCACACCTGAAGGCTCCGAGGTTGGTGATTTCCTGGCGCTGGATCTTGGAGGCACAAACTTTCGAGTGATGCTGGTGAAAGTGGGTGAAGATGAAGAGCGAGGCTGGAAGGTGGAGACAAAGCATCACATGTACTCCATCCCTGAAGACGCCATGACCGGCACGGCTGAAATGTTGTTTGACTACATTGCCGGGTGCATATCCGACTTCCTGGACAAGCATAATCTGAAGCATAAGAAGCTTCCGCTGGGATTCACCTTCTCTTTTCCAGTCCGTCATGAGGATTTGGACAAGGGCATTCTGCTCAACTGGACTAAAGGCTTCAAGGCCTCTGGCGCTGAGGGCAATAATGTTGTCGGCCTACTGAGAGATGCCATTAAAAGAAGAGGGGACTTTGAAATGGACGTGGTTGCCATGGTGAACGACACAGTAGCCACCATGATCTCCTGCTACTATGAAGATCGCAGCTGTGAAGTCGGTATGATAGTAGGGACCGGCTGTAATGCGTGTTATATGGAGGAGATGCGTAaggtggagctggtggagggAGAGGAGGGGAGGATGTGTGTGAACACAGAGTGGGGAGCGTTTGGGGACAATGGCGAACTGGAGGACTTCCGGCTGGAGTACGACCGTGTTATTGACGAGACTTCACTAAACCCTGGACATCAGCTGTACGAGAAGCTGATTGGTGGGAAGTATATGGGCGAGCTTGTGCGTCTTGTGCTGGTAAAACTAGTGAATGAAAACCTGCTGTTCAATGGAGAAGCCTCAGACCTCCTGAAAACACGTGGAGCTTTTGAAACTCGCTTCGTCTCCCAGATCGAGAGTGACACGGGGGACAGGAAGCAGATCTACAACATCCTAAGCTGCCTGGGAATCCTGCCGTCGGAGCTGGACTGTGACGTTGTGCGTCTGGTCTGCGAGAGCGTGTCCACGCGCGCCGCTCACGTGTGCGGGGCCGGCCTCGCGGGCGTCATCAACCTGATGAGAGAACGCCGTTGCCAGGACGACCTGAAGATCACCGTGGGAGTCGACGGCTCTGTCTACAAACTACACCCTCATTTCAAAGAGCGGTTCCACAAGCTTGTGTGGGAAATGGCGCCTCACTGCGAGATTACCTTCATCCAATCAGAAGAGGGGAGCGGCCGGGGCGCGGCGCTCATTTCCGCTGTGGCCtgcaagatggccgcctgcatGCTGTCGCCGTGAAAAACGCGATTCGTTCTCGTTGGGCGGATTTCACGAGTCACGGCGGACCCGCAATGCTAGAGCGGCCTCTCCATGTGACGAAAGTGCTTTGCTCCTTTTCAACAGGAGGCTATGGGGTTGTTTGGCAACATCTATTAACCACAGCCCGCTGGAATGTTTAGCATGTGTGTTATTTTGTGCCATAAAGGCAAACGCTTGCAGTTAAATACGCTTTTAGACGCGACATACACCTTTTATTGTTAGCTATTGCAATGAGCACATTCAGGTAATGTTACATATACTTGCACCTTCATGGCATGGTTTGGAGAGGCGCGGAGGGACTAGATGCGTTTGTAAATATATGAACTGGTCAGGGTCAGCAAGGTAATTGTGCACTGtttattgcttgttttatttattgagttttaaattgtttatattcaGTGGTAATCAGaactgttaaattatttaatgcagaaCTTTAATATACTTTGTACGCGTGATTGACTGTTGTAAATAAACTTGCTGTACTATTAAA

Function

symbol description
gck Predicted to enable fructokinase activity; glucokinase activity; and mannokinase activity. Acts upstream of or within glucose homeostasis; pancreas regeneration; and type B pancreatic cell development. Predicted to be active in cytosol and mitochondrion. Is expressed in several structures, including digestive system; female organism; heart; male organism; and muscle. Human ortholog(s) of this gene implicated in artery disease (multiple); familial hyperinsulinemic hypoglycemia 3; and glucose metabolism disease (multiple). Orthologous to human GCK (glucokinase).

NR:

description
PREDICTED: glucokinase isoform X1

GO: NA

KEGG:

id description
K12407 GCK; glucokinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043246238.1 False 2019 mRNA 0.50 10 18411637 18417020
XM_043246239.1 True 2938 mRNA 0.47 10 18408086 18417020

Neighbor

gene id symbol gene type direction distance location
orai1a orai1a,orai1,LOC107550979,LOC107687980,LOC107703171,LOC107753099,LOC106585507 coding upstream 53820 18349093 ~ 18354266 (+)
rnf34a rnf34a,rnf34,LOC107687978,LOC107712480,LOC107703169 coding upstream 74373 18326458 ~ 18333713 (+)
ggt5a ggt5a,LOC107703163,LOC107753105,LOC107712462,LOC107550924,LOC107580168 coding upstream 166856 18233930 ~ 18241230 (+)
hnf1a hnf1a,LOC107712475,LOC107687971,LOC107550982 coding upstream 301279 18098897 ~ 18106807 (+)
si:ch211-170d8.2 LOC107550939,LOC107753111,LOC107703157,LOC107554433,LOC107687993,LOC107712458 coding upstream 309783 18095035 ~ 18098303 (+)
LOC122350731 LOC107703135,LOC107753145,LOC107550932,LOC107712468,LOC107657321 coding downstream 26055 18443075 ~ 18447061 (+)
dusp2 dusp2,LOC107657330,LOC107712482,LOC107550972,LOC107554416,LOC107703175 coding downstream 36556 18453576 ~ 18456539 (+)
zgc:152830 zgc:152830,LOC107550967,LOC107657328,LOC107703177,LOC107554415,LOC107712486 coding downstream 191695 18608715 ~ 18614892 (+)
olfml2a olfml2a,LOC107657324,LOC107550966,LOC107554414,LOC107703179 coding downstream 217276 18634296 ~ 18651554 (+)
LOC122350979 LOC107728433,LOC107676613 coding downstream 246926 18663946 ~ 18672229 (+)
G64862 NA non-coding upstream 16875 18390674 ~ 18391211 (+)
G64858 NA non-coding upstream 40976 18366570 ~ 18367110 (+)
G64855 NA non-coding upstream 59303 18347437 ~ 18348783 (+)
G64841 NA non-coding upstream 120545 18287296 ~ 18287541 (+)
G64835 NA non-coding upstream 183385 18224397 ~ 18224701 (+)
G64878 NA non-coding downstream 34022 18451042 ~ 18451364 (+)
G64889 NA non-coding downstream 199958 18616978 ~ 18618184 (+)
G64910 NA non-coding downstream 256947 18673967 ~ 18674344 (+)
G65073 LOC107564452,LOC107733255,LOC107755688,LOC107702821,LOC107733264,LOC107668424,LOC553487,LOC107564453 non-coding downstream 594913 19011933 ~ 19234600 (+)
G65094 NA non-coding downstream 632262 19049282 ~ 19212125 (+)
lrrc75ba lrrc75ba,LOC107712478,LOC107753104,LOC107703167,LOC107554425,LOC107687975,LOC105891565,LOC108414797 other upstream 123125 18258220 ~ 18284961 (+)
LOC122350298 pla2g1b,LOC107703141,LOC107753147,LOC107554411,LOC107554412,LOC107550943 other upstream 327517 18071485 ~ 18080569 (+)
LOC122350299 LOC107550944,LOC107687988,LOC107753148,LOC107703140 other upstream 337158 18068716 ~ 18070928 (+)
LOC122350300 LOC107687986,LOC107554413,LOC107703155,LOC101885033,LOC108412050 other upstream 345738 18056972 ~ 18062348 (+)
LOC122350649 si:ch73-138n13.1,LOC107687963,LOC107748143,LOC107553839,LOC107565328,LOC107684508,LOC107753120 other upstream 711680 17683305 ~ 17696406 (+)
sb:cb288 NA other downstream 1928 18418948 ~ 18423805 (+)
adra2b adra2b,LOC107712484,LOC107657329,LOC107554404,LOC107753091,LOC107550971,LOC107703147 other downstream 43031 18460051 ~ 18464547 (+)
gpat2 gpat2,LOC107712449,LOC107550920,LOC107657318 other downstream 148679 18565699 ~ 18600484 (+)
si:ch211-158d24.2 si:ch211-158d24.2,LOC107550960,LOC107703181,LOC107676623,LOC107728434,LOC107571139,LOC107753137 other downstream 278434 18695454 ~ 18722246 (+)
G65100 sf3a1,LOC107564451,LOC107550953 other downstream 677927 19094947 ~ 19096071 (+)

Expression


Co-expression Network