LOC122350099 (renbp,LOC107747208,LOC107683888,LOC107702837,LOC107725049)


Basic Information

Item Value
gene id LOC122350099
gene name renbp,LOC107747208,LOC107683888,LOC107702837,LOC107725049
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 19423992 ~ 19428532 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043246306.1
GCTGCCTGGCTGGATGTTGGTCATATGATGCGCGTTTTTTTCACCGTGTCTGCAGAAATCGAGGAAGAGTCGCTTTTATTTTCACTGTCACTAAAAAGGAAGGTGCTTTTATAAAAAGGCAAGCGTAGAAGAAGGCCTTTCTTCACCTGGGAaaaaaggGTACAATGACTGAAGCGTCGCTGGAGCGGTACCGAGAGAGAATCCGGACTGAACTGGACCGGGTCGTGGATTTCTGGCTGAAGTATTCCCATGACCGGGAGCACGGTGGGTTTTTTAACTGCCTTGGAAAAGATGGGAAGGTCTATGATGAGCTGAAGTATGTGTGGTTACAAGGGAGACAGGTCTGGATGTACAGCAGGTTGTATCGTACAACGGAAAGATTTCACAGACCTGAGATTCTTGAGGCTGCTAAATCAGGCGCAGCGTTTCTGCAGAAGTTCGCTCGAGTTCAGGCCTCCAGCGGGCCGGGGAAATGTGCCTTCTGCTTGACGAGAGATGGGCGAGCGGTGAAGGTTCAAAGGACGATATTCAGCGAGTGTTTCTATGTGATGGCCATGGATGAGCTGTCAAGGGTTACACAAGACAAAGAGATGCAGGCAGATGCCGAGGGCATGATGGACCAGCTGATATTCTGGGTTCAGACCGATTCGTCAGATCTTGGTCGTCCTCAACTTCCTGGTGATCTGCCAGTCAACAGCATGGCAGTTCCCATGATGCTCCTGTGCCTCGTGGATCAGCTGACAGAGGGCAGAACCGatgttgcaaaaaaatacaaagaccTGAGCGGATGGTGTGTGGAACGGATATTGCAGCATATACAGAGAGAGGGAAAAGCCATTTTGGAAAACGTCACATTGAATGGAAAGGAACTTCCTGGCTGTCAAGGGCGGTTGCAGAACCCTGGTCACGCTCTGGAGGCTGGCTGGTTCCTGCTGCAGTACGCGCTGAAGGAAGGAGACGTGCAGCTGCAGAAGACAGCAGTGGATAAGTTCATGGAGATCCCCTTCCACACCGGATGGGACGAGCAGCATGGCGGCCTCTTCTACTTCCTGGATGCAGATGGTCATTGTCCGACTCAGTTAGAGTGGAATATGAAGTTGTGGTGGCCTCACTGTGAAGCTCTGATTGCTTACCTGATGGCCTACAGTCACAGCAGAAAGCCTGTGCTACTGGAGCGCTTCAAGCTGATCTATGACTACACCTTCACACACTTTTCTGATGAAGAACACGGCGAGTGGTTTGGATATCTGAGTCGTCAGGGAGAGGTTGTGCTGGATTTCAAAGGAGGACCCTTCAAAGGGTTCTTTCATGTTCCTCGCTGTCTCTACATGTGTGAGAAGCTTCTGGACGCTCTTCTTGAAAGGCAGAATTCTTGAACTGACCAGTTTGCAGAAAAATGCTATTGTAAAATTAATCGGTCTAATAAGGTCTTACAGTATGggttaaaatgatcaatttaagccattcacacattttaaatgaaaaagggaccagttttaattttttagccATGCTTAAATACTGTCTTTGCTAGTCCAATTTCTTTATATGAAAAGTTGATTCAGCTGTGAGTTTATAAACTCTGATCACTCTGCTCTTATGAGTgccttttttttgcatatgctGCAGTATAAAACATGCCAAATGTGCTGACTAAATGTTGATGTCTATTTAAAGTCA
>XM_043246307.1
GCTGCCTGGCTGGATGTTGGTCATATGATGCGCGTTTTTTTCACCGTGTCTGCAGAAATCGAGGAAGAGTCGCTTTTATTTTCACTGTCACTAAAAAGGAAGGTGCTTTTATAAAAAGGCAAGCGTAGAAGAAGGCCTTTCTTCACCTGGGAaaaaaggGTACAATGACTGAAGCGTCGCTGGAGCGGTACCGAGAGAGAATCCGGACTGAACTGGACCGGGTCGTGGATTTCTGGCTGAAGTATTCCCATGACCGGGAGCACGGGTGACATGATTCACTATATAACACGTGTCTGTAGCTGCATTTCCTTTTTATATGCCTAATTCTTAAAATATCtagatgcaaaaatatttaagccTGATTTAACAAACATAAATGCAGCGGTGAAACTGCGCTCAACACTGAACCCTGAGGGACACCAGTCATTCAGACAGCATACATAAATATTCTGAAATGAGAGTGTCATATATACATACTTTGCTGAGGTATAAGTATTGAAGTTAATGTGAAATTGAACTGATTTAACAATGCCCTGTTgaatgtttgtttcattttgactttagTGGGTTTTTTAACTGCCTTGGAAAAGATGGGAAGGTCTATGATGAGCTGAAGTATGTGTGGTTACAAGGGAGACAGATATCTGCTAGGTCTGGATGTACAGCAGGTTGTATCGTACAACGGAAAGATTTCACAGACCTGAGATTCTTGAGGCTGCTAAATCAGGCGCAGCGTTTCTGCAGAAGTTCGCTCGAGTTCAGGCCTCCAGCGGGCCGGGGAAATGTGCCTTCTGCTTGACGAGAGATGGGCGAGCGGTGAAGGTTCAAAGGACGATATTCAGCGAGTGTTTCTATGTGATGGCCATGGATGAGCTGTCAAGGGTTACACAAGACAAAGAGATGCAGGCAGATGCCGAGGGCATGATGGACCAGCTGATATTCTGGGTTCAGACCGATTCGTCAGATCTTGGTCGTCCTCAACTTCCTGGTGATCTGCCAGTCAACAGCATGGCAGTTCCCATGATGCTCCTGTGCCTCGTGGATCAGCTGACAGAGGGCAGAACCGatgttgcaaaaaaatacaaagaccTGAGCGGATGGTGTGTGGAACGGATATTGCAGCATATACAGAGAGAGGGAAAAGCCATTTTGGAAAACGTCACATTGAATGGAAAGGAACTTCCTGGCTGTCAAGGGCGGTTGCAGAACCCTGGTCACGCTCTGGAGGCTGGCTGGTTCCTGCTGCAGTACGCGCTGAAGGAAGGAGACGTGCAGCTGCAGAAGACAGCAGTGGATAAGTTCATGGAGATCCCCTTCCACACCGGATGGGACGAGCAGCATGGCGGCCTCTTCTACTTCCTGGATGCAGATGGTCATTGTCCGACTCAGTTAGAGTGGAATATGAAGTTGTGGTGGCCTCACTGTGAAGCTCTGATTGCTTACCTGATGGCCTACAGTCACAGCAGAAAGCCTGTGCTACTGGAGCGCTTCAAGCTGATCTATGACTACACCTTCACACACTTTTCTGATGAAGAACACGGCGAGTGGTTTGGATATCTGAGTCGTCAGGGAGAGGTTGTGCTGGATTTCAAAGGAGGACCCTTCAAAGGGTTCTTTCATGTTCCTCGCTGTCTCTACATGTGTGAGAAGCTTCTGGACGCTCTTCTTGAAAGGCAGAATTCTTGAACTGACCAGTTTGCAGAAAAATGCTATTGTAAAATTAATCGGTCTAATAAGGTCTTACAGTATGggttaaaatgatcaatttaagccattcacacattttaaatgaaaaagggaccagttttaattttttagccATGCTTAAATACTGTCTTTGCTAGTCCAATTTCTTTATATGAAAAGTTGATTCAGCTGTGAGTTTATAAACTCTGATCACTCTGCTCTTATGAGTgccttttttttgcatatgctGCAGTATAAAACATGCCAAATGTGCTGACTAAATGTTGATGTCTATTTAAAGTCA
>XM_043246308.1
AATCCGGACTGAACTGGACCGGGTCGTGGATTTCTGGCTGAAGTATTCCCATGACCGGGAGCACGGTGGGTTTTTTAACTGCCTTGGAAAAGATGGGAAGGTCTATGATGAGCTGAAGTATGTGTGGTTACAAGGGAGACAGATATCTGCTAGGTCTGGATGTACAGCAGGTTGTATCGTACAACGGAAAGATTTCACAGACCTGAGATTCTTGAGGCTGCTAAATCAGGCGCAGCGTTTCTGCAGAAGTTCGCTCGAGTTCAGGCCTCCAGCGGGCCGGGGAAATGTGCCTTCTGCTTGACGAGAGATGGGCGAGCGGTGAAGGTTCAAAGGACGATATTCAGCGAGTGTTTCTATGTGATGGCCATGGATGAGCTGTCAAGGGTTACACAAGACAAAGAGATGCAGGCAGATGCCGAGGGCATGATGGACCAGCTGATATTCTGGGTTCAGACCGATTCGTCAGATCTTGGTCGTCCTCAACTTCCTGGTGATCTGCCAGTCAACAGCATGGCAGTTCCCATGATGCTCCTGTGCCTCGTGGATCAGCTGACAGAGGGCAGAACCGatgttgcaaaaaaatacaaagaccTGAGCGGATGGTGTGTGGAACGGATATTGCAGCATATACAGAGAGAGGGAAAAGCCATTTTGGAAAACGTCACATTGAATGGAAAGGAACTTCCTGGCTGTCAAGGGCGGTTGCAGAACCCTGGTCACGCTCTGGAGGCTGGCTGGTTCCTGCTGCAGTACGCGCTGAAGGAAGGAGACGTGCAGCTGCAGAAGACAGCAGTGGATAAGTTCATGGAGATCCCCTTCCACACCGGATGGGACGAGCAGCATGGCGGCCTCTTCTACTTCCTGGATGCAGATGGTCATTGTCCGACTCAGTTAGAGTGGAATATGAAGTTGTGGTGGCCTCACTGTGAAGCTCTGATTGCTTACCTGATGGCCTACAGTCACAGCAGAAAGCCTGTGCTACTGGAGCGCTTCAAGCTGATCTATGACTACACCTTCACACACTTTTCTGATGAAGAACACGGCGAGTGGTTTGGATATCTGAGTCGTCAGGGAGAGGTTGTGCTGGATTTCAAAGGAGGACCCTTCAAAGGGTTCTTTCATGTTCCTCGCTGTCTCTACATGTGTGAGAAGCTTCTGGACGCTCTTCTTGAAAGGCAGAATTCTTGAACTGACCAGTTTGCAGAAAAATGCTATTGTAAAATTAATCGGTCTAATAAGGTCTTACAGTATGggttaaaatgatcaatttaagccattcacacattttaaatgaaaaagggaccagttttaattttttagccATGCTTAAATACTGTCTTTGCTAGTCCAATTTCTTTATATGAAAAGTTGATTCAGCTGTGAGTTTATAAACTCTGATCACTCTGCTCTTATGAGTgccttttttttgcatatgctGCAGTATAAAACATGCCAAATGTGCTGACTAAATGTTGATGTCTATTTAAAGTCA

Function

symbol description
renbp Predicted to enable N-acylglucosamine 2-epimerase activity and peptidase inhibitor activity. Predicted to be involved in N-acetylglucosamine metabolic process and N-acetylmannosamine metabolic process. Predicted to act upstream of or within carbohydrate metabolic process. Is expressed in pancreas; pancreas primordium; pancreatic bud; and yolk syncytial layer. Orthologous to human RENBP (renin binding protein).

NR:

description
PREDICTED: N-acylglucosamine 2-epimerase-like

GO:

id name namespace
GO:0016853 isomerase activity molecular_function

KEGG:

id description
K01787 RENBP; N-acylglucosamine 2-epimerase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043246306.1 False 1680 mRNA 0.47 11 19423992 19428532
XM_043246307.1 True 1990 mRNA 0.45 10 19423992 19428532
XM_043246308.1 False 1492 mRNA 0.47 10 19423992 19427727

Neighbor

gene id symbol gene type direction distance location
gpkow gpkow,LOC107683890,LOC107702823,LOC107575438 coding downstream 140551 19274956 ~ 19283441 (-)
ccdc157 ccdc157 coding downstream 162167 19257900 ~ 19261825 (-)
LOC122349957 LOC107668424,LOC107564453 coding downstream 189335 19232671 ~ 19234657 (-)
LOC122349953 LOC107564452 coding downstream 194122 19225286 ~ 19229870 (-)
LOC122349956 LOC107564454 coding downstream 205357 19216045 ~ 19218635 (-)
zgc:162200 zgc:162200,LOC107683887,LOC107702829,LOC107747207,LOC107724826,LOC107570514,LOC107550908 coding upstream 5497 19434029 ~ 19449741 (-)
rbm39b rbm39b,LOC107683885,LOC107747212,LOC107550952,LOC107570509,LOC107725799 coding upstream 52735 19481267 ~ 19492499 (-)
rh50 rh50,LOC107724755,LOC107570510,LOC107702833,LOC107683883,LOC107550951,LOC107747214 coding upstream 65605 19494137 ~ 19499408 (-)
slc12a5b slc12a5b,LOC107550951,LOC107747216,LOC107683884,LOC107702850,LOC107725712 coding upstream 71025 19499557 ~ 19544031 (-)
eif2d eif2d coding upstream 132299 19560831 ~ 19566756 (-)
G65244 NA non-coding downstream 14952 19406755 ~ 19409040 (-)
G65201 NA non-coding downstream 155802 19100929 ~ 19268190 (-)
G65199 NA non-coding downstream 156887 19099533 ~ 19267105 (-)
G65217 sf3a1,LOC106585510 non-coding downstream 160687 19262737 ~ 19263305 (-)
G65180 NA non-coding downstream 166962 19086572 ~ 19257030 (-)
LOC122349935 NA non-coding upstream 279565 19708097 ~ 19744650 (-)
G65596 adamts13,LOC107725310,LOC107548275,LOC107702807 non-coding upstream 674805 20103337 ~ 20104000 (-)
LOC122350956 NA non-coding upstream 708071 20136603 ~ 20140200 (-)
G65613 LOC107756819,LOC107723069,LOC107578151,LOC107571958 non-coding upstream 737524 20166056 ~ 20166372 (-)
LOC122350542 rsph14,LOC107756838,LOC107691565,LOC107702819,LOC107723028 non-coding upstream 853050 20281582 ~ 20284840 (-)
LOC122351133 NA other downstream 221615 19202277 ~ 19202377 (-)
LOC122350102 LOC107717958,LOC107676625,LOC107550916,LOC107682323,LOC107659265 other downstream 376023 19023713 ~ 19047969 (-)
G65033 NA other downstream 863658 18559667 ~ 18560334 (-)
tbc1d10aa tbc1d10aa,LOC107657331,LOC107712481,LOC107550973,LOC107753095,LOC107703173,LOC107554420 other downstream 1022054 18390663 ~ 18401938 (-)
G64967 NA other downstream 1266449 18155135 ~ 18157543 (-)
si:ch211-218o21.4 si:ch211-218o21.4,LOC107550930,LOC107702847,LOC107727198,LOC107747209,LOC107683911 other upstream 206 19428738 ~ 19433291 (-)
zgc:154046 adamts13,zgc:154046,LOC107702807,LOC107548275,LOC107722731,LOC107702859,LOC108426726,LOC108265337,LOC107740996,LOC107565124,LOC107691587 other upstream 689475 20118007 ~ 20134345 (-)
LOC122350560 ppia,LOC107566959,LOC107756826,LOC107722982,LOC107591936,LOC107691583 other upstream 986533 20415065 ~ 20421296 (-)
LOC122350336 LOC107714596,LOC107556216,LOC107698089 other upstream 1290408 20718940 ~ 20723155 (-)
gna14a gna14a,gna14,LOC107698092,LOC107678467,LOC107556222,LOC107721075,LOC108426707,LOC108265545 other upstream 1586461 21014993 ~ 21025831 (-)

Expression


Co-expression Network