G30981


Basic Information

Item Value
gene id G30981
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 10162961 ~ 10169883 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU35058
CCCACGTACTGGGCATCCGGCCCAATGTGCTCTTCCAAAACAAAGAACTGATTCCAGATCCAGCCTCGCTTGGGACGATGATGCGAGTCCTTGTCGCCATCGGGCAGTTTGGTCTGGTTGTGGGTGAACGTGGGGCTGGGTGGAGAAGGGGTCCCATAGCTCCTCTGGAGCACACATAGGCATAGCAGCAGAGGGGACAGACAGGCAGGTCTGCTGGCTGCTCTCATGTTAAAGAGTCACAACGTTTGAACTCCTGCTCTCGCTCACCCAGAGGTCTCTCTCGCGGTGGGCGGCTCTAGATGCCGATCGGACCAGTTCGCAGGACTTGGCTGACGGCCATGGTTTAAAATCCTGTTGTCGCAGAGACCCGGCGGGCAGCACTCACATCGTGGGCCAAGAGCTAGACGTGTTGATTCGTTGGGGAGTCGCCGTCCACTGGAGACTCACTGGAGGCAATGGCAGATTTCCACGAAACATCTTCTCAGTCTTTCCTTAAAAGATGACAAGGCTTTGGAATATGGAGGAGTGCTCCTGATGTTCCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU35058 True 543 lncRNA 0.56 2 10162961 10169883

Neighbor

gene id symbol gene type direction distance location
CI01000004_09779903_09780536 NA coding downstream 382083 9779235 ~ 9780878 (-)
CI01000004_09754664_09774588 CDH6 coding downstream 387888 9753467 ~ 9775073 (-)
CI01000004_09703159_09711600 NA coding downstream 450963 9701926 ~ 9711998 (-)
CI01000004_09639469_09656035 NA coding downstream 506926 9638825 ~ 9656035 (-)
CI01000004_09616639_09622200 RNF31 coding downstream 540301 9616639 ~ 9622660 (-)
CI01000004_10271350_10272027 NA coding upstream 101315 10271198 ~ 10272206 (-)
CI01000004_10290550_10295288 CAHZ coding upstream 119980 10289863 ~ 10295357 (-)
CI01000004_10436514_10438365 NA coding upstream 266616 10436499 ~ 10439459 (-)
CI01000004_10458668_10465442 NA coding upstream 288779 10458662 ~ 10465703 (-)
CI01000004_10553379_10573352 PAXIP1 coding upstream 383154 10553037 ~ 10575243 (-)
G30970 NA non-coding downstream 25314 10137283 ~ 10137647 (-)
G30952 NA non-coding downstream 93258 10063129 ~ 10069703 (-)
G30937 NA non-coding downstream 162887 9999822 ~ 10000074 (-)
G30936 NA non-coding downstream 164324 9993781 ~ 9998637 (-)
G30652 NA non-coding downstream 191230 9971431 ~ 9971731 (-)
G30986 NA non-coding upstream 14210 10184093 ~ 10205019 (-)
G31014 NA non-coding upstream 115327 10285210 ~ 10286174 (-)
G31042 NA non-coding upstream 184596 10354479 ~ 10371232 (-)
G31046 NA non-coding upstream 189668 10359551 ~ 10359791 (-)
G31056 NA non-coding upstream 215416 10385299 ~ 10385770 (-)
G30316 NA other downstream 756040 9377937 ~ 9406921 (-)
G29746 NA other downstream 1804834 8354498 ~ 8358127 (-)
G29656 NA other downstream 2197461 7964364 ~ 7965500 (-)
G29388 NA other downstream 3531054 6631293 ~ 6631907 (-)
CI01000004_06539836_06541252 NA other downstream 3617389 6538904 ~ 6541252 (-)
G31203 NA other upstream 576554 10746437 ~ 10750641 (-)
CI01000004_11407198_11412220 ADCYAP1B, ADCYAP1 other upstream 1237582 11406957 ~ 11412907 (-)
G32150 NA other upstream 1606636 11776519 ~ 11780951 (-)
G32207 NA other upstream 2206285 12376168 ~ 12384780 (-)
CI01000004_14543631_14551256 NA other upstream 4380917 14541515 ~ 14551352 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location