ren (ren,LOC107747224,LOC107727110,LOC107570508,LOC107550929)


Basic Information

Item Value
gene id ren
gene name ren,LOC107747224,LOC107727110,LOC107570508,LOC107550929
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 19451487 ~ 19456756 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043246345.1
TGTGAAGAAGTCGGGGCATTAGATGCGTTACTGTAGAAAGTGATTTGATCCATCGGTAGAAATGAAGGTACACTGCTTGGCTCTTCTAGTCCTGTCATTCTCAACAACCAGCACAGAGGCCTTATGGAGGGTAAAATTGAAGAAAATGCCTTCCATAAGAGAAACCCTAAAGGAAATGGGTGCCACACCAGCTCAAGTGTTTTCTGAGATTATACCAAAATATGACGAACCTTCACCCACAAACGGCACAGCTCCAACACCTCTGATCAACTACTTAGATACTCAATACTTTGGTGAGATTAGTATTGGTTCACCAGCTCAGATGTTCAATGTTGTGTTTGACACGGGTTCTGCCAACCTCTGGGTTCCTTCTCACAGCTGTTCTCCTTTATACACAGCCTGCTTCACACACAACAGGTACGATGCTTCCAGATCCCTCACGCATATTTCCAACGGCACGGGATTCTCCATCCAATACGCTTCTGGAAACGTCAGAGGATTTCTGAGTGAGGACGTGGTTGTAGTTGGTGGTATTCCGGTGGTGCAGGTTTTTGCGGAGGCCACAGCCCTTCCTGCGATCCCGTTCATCTTTGCCAAGTTTGATGGAGTGTTAGGGATGGGATATCCAGATGTAGCCATCGATGGAATTACACCTGTGTTCGATCGCATCATGTCTCAACGAGTCCTGAAACAGAACGTCTTCTCAGTGTACTACAGCAGAGACCCGACACATGTCCCCGGTGGAGAGCTGGTGCTGGGGGGCACAGACCCAAACTACCACACTGGAGCCTTCCACTATATGAATACCAAAGAGCAAGGCAAGTGGGAGGTTGTCATGAAGGGAGTGTCTGTGGGTGCCGATATGCTGTTCTGCATGGACGGCTGTACGGCTGTGATTGACACAGGCTCCTCCTACATCACAGGTCCTGCTTCCGCCATTGCCATTCTGATGAAAACAATTGGTGCCGTTGAGCTGGCAGAGGGAGGGTACACTGTCAACTGTAATCTGGTCAAGTTGTTGCCCACTGTGGCTTTTCATCTCGGTGGTCAGGAATATTCTCTCATGGAAGAGGACTATATTCTCTGGCAGTCAGAGTTCGGGGAGGACATCTGCACTGTGACGTTCAAAGCGTTGGATGTGCCGCCCCCTACTGGTCCCATCTGGATACTGGGGGCGAACTTCATAGCTCGATACTATACGGAGTTTGATCGGGGAAATAATCGCATCGGCTTTGCTCGAGCAGTCTGAGAAATGCATGGAGATTCTGCTGTTATATTAGTTATAGCTGACAAGAAGTGCACTTATACGTTTAGCTTATAGTTCAAAAGAATATACTTTAGTGGGAATGCTTCTGGACATTTGCatgttatttacaaataaagatCTAGTTTAAATTGACATTAAGTACAGTTAGTTAAACTTAAGAGTGTTTTTGACCCAGATATGTAGGGTTTGAACACATTTTTAGTCGCAATCGTATAATTACTTGTGCtttgtttgaaatatggttaaGATGTTCTTTCATAATAAAACTTGTCACGTATGTCACGTATTTGTAATAAAGTTACAATTTAGTACATTTA

Function

symbol description
ren Predicted to enable aspartic-type endopeptidase activity. Predicted to be involved in angiotensin maturation. Predicted to act upstream of or within proteolysis. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in intermediate mesoderm; interrenal primordium; and kidney. Human ortholog(s) of this gene implicated in essential hypertension; familial juvenile hyperuricemic nephropathy; hand, foot and mouth disease; hypertension; and portal hypertension. Orthologous to human REN (renin).

NR:

description
PREDICTED: renin

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0004190 aspartic-type endopeptidase activity molecular_function

KEGG:

id description
K01380 REN; renin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043246345.1 True 1584 mRNA 0.45 9 19451487 19456756

Neighbor

gene id symbol gene type direction distance location
kdm5c LOC107747206,LOC107550909,LOC107683899,LOC107570512,LOC107724909,LOC107702826 coding upstream 27675 19406564 ~ 19423812 (+)
iqsec2b iqsec2,LOC107747221,LOC107683900,LOC107702804,LOC107570507,LOC107550910,LOC107725888 coding upstream 46003 19347902 ~ 19405484 (+)
LOC122349946 LOC107747205,LOC107683889,LOC556872 coding upstream 104912 19284717 ~ 19346575 (+)
pold2 pold2,LOC107747204 coding upstream 180617 19267352 ~ 19270870 (+)
sf3a1 sf3a1,LOC107550953,LOC107564451 coding upstream 184382 19261941 ~ 19267105 (+)
csf1b csf1b,LOC107683886,LOC107747213,LOC107702844 coding downstream 7839 19464595 ~ 19476656 (+)
mapkapk2b mapkapk2b,LOC107683909,LOC107550950,LOC107726784,LOC107747217,LOC107576554 coding downstream 110523 19567279 ~ 19571233 (+)
fmodb fmodb,LOC107683908,LOC107747218,LOC107726688,LOC107575999,LOC107702840 coding downstream 115555 19572311 ~ 19577890 (+)
LOC122350022 NA coding downstream 125556 19582312 ~ 19583244 (+)
LOC122350024 LOC107683897,LOC107735514 coding downstream 132828 19589584 ~ 19590513 (+)
G65111 NA non-coding upstream 25765 19424019 ~ 19425722 (+)
G65108 NA non-coding upstream 104443 19183690 ~ 19347044 (+)
G65073 LOC107564452,LOC107733255,LOC107755688,LOC107702821,LOC107733264,LOC107668424,LOC553487,LOC107564453 non-coding upstream 216887 19011933 ~ 19234600 (+)
G65074 NA non-coding upstream 218103 19224569 ~ 19233384 (+)
G65094 NA non-coding upstream 239362 19049282 ~ 19212125 (+)
G65267 NA non-coding downstream 100788 19557544 ~ 19558486 (+)
G65268 NA non-coding downstream 102117 19558873 ~ 19559169 (+)
G65284 NA non-coding downstream 237624 19694380 ~ 19752601 (+)
G65295 rab11fip1,LOC107579780,LOC107683894,LOC107724309,LOC107565115,LOC107740979 non-coding downstream 302714 19759470 ~ 19780752 (+)
G65361 NA non-coding downstream 483351 19940107 ~ 19940869 (+)
pqbp1 pqbp1,LOC107702814,LOC107683912,LOC107747222 other upstream 177717 19272092 ~ 19273770 (+)
LOC122350733 LOC107702875,LOC107722994,LOC107591954,LOC107573969,LOC107722996,LOC107691581 other upstream 249800 19199988 ~ 19201687 (+)
G65105 LOC107747205,LOC107550912,LOC107683889,LOC108412149 other upstream 299182 19119944 ~ 19152305 (+)
G65100 sf3a1,LOC107564451,LOC107550953 other upstream 355416 19094947 ~ 19096071 (+)
si:ch211-158d24.2 si:ch211-158d24.2,LOC107550960,LOC107703181,LOC107676623,LOC107728434,LOC107571139,LOC107753137 other upstream 729241 18695454 ~ 18722246 (+)
rfk rfk,LOC107740987,LOC107723557 other downstream 573278 20030034 ~ 20033607 (+)
timm17b timm17b,LOC107722912 other downstream 678363 20135119 ~ 20139364 (+)
LOC122350816 slc18a1,LOC107702874,LOC107722997,LOC107591929,LOC107756821,LOC107566956 other downstream 966525 20423281 ~ 20431832 (+)
rnf122 si:ch1073-392o20.1,rnf122,LOC107747807,LOC107678386,LOC107698113,LOC108440685,LOC107563167 other downstream 1501844 20958600 ~ 20972040 (+)
ankrd39 LOC107721080,LOC107678427,LOC107559444 other downstream 1745692 21202448 ~ 21204346 (+)

Expression


Co-expression Network