nppb (LOC107687134,LOC107748982,LOC107595789)


Basic Information

Item Value
gene id nppb
gene name LOC107687134,LOC107748982,LOC107595789
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 23425908 ~ 23427204 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043246370.1
CTCCACTGGAGGATCATACAGACAACGACAAACGAGACAGAAGAGCTGCAGAAACATCAGGAACCATGAAATCAACTGATATTCCTCTAGTCGGCCTTCTATTAATCTTCAGCATTCAGCTCACGGGCGCGTTCCCGCTGCAAAACACAGCATTGACCAACGAGGACAGGGATGTCTTAAAGCTTCTTCTACAGCGACTGGAGGAGACCGTTCCCGCTTCTCCTCAAGAGCAGACACTGGTGAAAgtggaagaagaggaggatgatCCCGAAGAAACCCGCATCGAACCTCAACCCAAGATTGACGCGAGGAACTATCTGTCTGCTCGGGACTTGAGGACAGTCCGGCAGGACTCCAAGAAATATTCCGGGTGTTTCGGGCGCAAACTGGACAGAATCGGCTCCATGTCGACCCTAGGCTGTAACACCGTCGGGCGCTCGGGTTCTAAGAAGTGGTGAAGTCTTAACGATTAGGAGCTTCTACACTGCGAAAACAGTCCAACTTTTAGTGCTGGTATTACTTTGGAGACTTATTTCTACTTGATCTGACCTTACAATGACTTTTGATCGCGTAACCTAATGTATTCAGGGTCGATTTAATCATACTCAATTATTTTTGACATCgacaaaaaaagatgttaacATCGAAGCACAATTTTAGGttacatgacttttttttttttactgtgttacTATGACTCCAGAAATTGTTCTTAaccatgcatatttatttagatatttatttaatttctttaaacagtccagttatatttttatgcatatttaatttaaatgtcattcagGTCAgttgtaataaatgtttacacatgcattttttttctgaaatctttctttctcgtttctttttctccaaAATGTATCTGAACACACGCACCATGAATTtctc

Function

NR:

description
B-type natriuretic peptide precursor

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043246370.1 True 906 mRNA 0.41 3 23425908 23427204

Neighbor

gene id symbol gene type direction distance location
nppal zgc:195023,LOC107595800,LOC107748995 coding upstream 2246 23422672 ~ 23423662 (+)
plod1a plod1a,plod1,LOC107698842,LOC107678430,LOC107748983 coding upstream 456935 22956869 ~ 22968973 (+)
LOC122350040 NA coding upstream 479754 22944210 ~ 22946154 (+)
fam110a LOC107755603,LOC107703992,LOC107678459,LOC107570008,LOC107553114,LOC107752568 coding upstream 711793 22710095 ~ 22714115 (+)
prickle3 LOC107752556,LOC107678453,LOC107755595,LOC107703993 coding upstream 716350 22673889 ~ 22709558 (+)
nppa nppa,LOC107691053,LOC107602452,LOC107595801,LOC107687143 coding downstream 1711 23428915 ~ 23430926 (+)
mthfr mthfr,LOC107602465,LOC107691055,LOC107687111 coding downstream 19987 23447191 ~ 23456783 (+)
plch2a LOC107687112,LOC107595766,LOC107691057,LOC107748961,LOC107602463 coding downstream 55691 23482895 ~ 23583377 (+)
si:ch211-251b21.1 si:ch211-251b21.1,LOC107748962,LOC107595769,LOC107687113,LOC107691059,LOC107602462,LOC107755276 coding downstream 159325 23586529 ~ 23597131 (+)
dpp9 dpp9 coding downstream 171524 23598728 ~ 23612503 (+)
LOC122350913 NA non-coding upstream 186096 23231564 ~ 23239812 (+)
G66344 NA non-coding upstream 187655 23237977 ~ 23238253 (+)
LOC122350915 NA non-coding upstream 194884 23230043 ~ 23231024 (+)
LOC122350789 NA non-coding upstream 514526 22909647 ~ 22911382 (+)
G66261 NA non-coding upstream 625754 22799639 ~ 22800154 (+)
G66350 NA non-coding downstream 5605 23432809 ~ 23433745 (+)
G66351 NA non-coding downstream 6914 23434118 ~ 23435033 (+)
G66416 NA non-coding downstream 188012 23615216 ~ 23616682 (+)
G66418 LOC107748960,LOC107687117,LOC107691060,LOC107595771,LOC107602461,LOC107755278 non-coding downstream 193723 23620927 ~ 23623471 (+)
LOC122350145 NA non-coding downstream 249230 23676434 ~ 23681832 (+)
LOC122350936 LOC107710771,LOC106926566,LOC107691064 other upstream 15347 23403713 ~ 23410561 (+)
prdm16 prdm16,si:ch211-263k4.2 other upstream 24346 23054616 ~ 23401562 (+)
mfn2 mfn2,LOC107748965,LOC107602467,LOC107710790,LOC107678429,LOC107698839,LOC107595787 other upstream 438746 22973995 ~ 22987162 (+)
wrap73 LOC107748967,LOC107698846,LOC107595759,LOC107678416,LOC107602469,LOC107710786 other upstream 500140 22899436 ~ 22925768 (+)
fkbp1aa fkbp1aa,fkb1b,fkbp1a,LOC107574256,LOC107553142,LOC103030299,LOC107752559,LOC100705189 other upstream 698464 22724582 ~ 22727444 (+)
ndufa7 ndufa7,LOC107748992,LOC107755274 other downstream 205146 23632350 ~ 23634065 (+)
acot7 acot7,LOC107754737,LOC107687121,LOC107693425 other downstream 325364 23752568 ~ 23804049 (+)

Expression


Co-expression Network