wasb (LOC107731288,LOC107668059,LOC107745750,LOC107549977,LOC107678704,LOC107549603)


Basic Information

Item Value
gene id wasb
gene name LOC107731288,LOC107668059,LOC107745750,LOC107549977,LOC107678704,LOC107549603
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 11743139 ~ 11747881 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043246487.1
TTCTCTTTTGCTGTGTTGCATTTACATCAGATTACAGAACACGGAAGCAACAGTTCCTTTCGAACCATTTGCCTGTTCTAAAAAGATTTCAGGCAGGTACTGTGGGCTAAGCAAGGGCCCCAGGCGTGGAGTCCCAAAATCTGTCCATTACATCAAGGAGAGATGAGCAAAGGAAAAGTCAAGGGGCAGGAGAACGTGCCTAGTTCTCTCCTCAGCAGCCAGGAGAATGAACGCCTGCTAGAGCTGCTGGGAAGGAGATGCGTGaccATGGCCACAGCAGTTGTTCAGTTGTACATGGCTCTTCCTCACAGTCCAACCCAATGGAGTCTCCAACATACAGGAGTTGTGTGTTTCGTTAAGGACAATCCTAAACGTTCATACTACATCCGGCTCTATGACATAAAGgaaAGTAAAATGGTTTGGGAGCAAGAGCTGTATAATCAGATGACATATTGCTGTCCAATGAGGTTCTTCCACACTTTTGCAGCTGATGACTGTCAAGTAGGTTTGAACTTTGCCAGTGAGACAGAAGCTGAATTTTTCAGAAACATCAGTGTGGAAAAGATTCATCAGAGATCCAATCGCCAGGaaaaaaaacagcatgctcCATCTGAAGAAAACCGGGCACTACCACAAATCCCTCCAACAAATGGTCCAGTTTCACAGCCAACTGTAATGGCCACAGTGGACATCCAGAACCCAGATATTGTGGCATCAAGGTACCGTTCCACCCCAGTGCCGACCCCCGCATCAGCCTCACTTTCCATAggcaaaaagaacaaaaagggAAAGAAGAAAGGTCCAAAGCTCACTAAGGCAGACATTGGAGCTCCTAGTGGATTCAAACATGTCACTCATGTTGGGTGGGATCCAAACTCTGGTTTTGATACCAACAATCTTGATCCGGACCTGAAGAAACTGTTCAACAGTGCTGGTATCAGTGATGCTGAGCTGGCAGACAAAGAAACATCTAAGATTATCTATGACTTTATCGAGCAATCTGGAGGCCTGGATGCTGTAAAAGAGGAAATGAGGAAACAGGaAGGTCCTTGTTCTGCTCCTGCACCTCCTCCACCTCGCGGTGGGCGTCCCCCAGTCCCAGGTCCACCCGGACGTCCTGCGCCACCTTCACGCAGCCCCGGACCCCCGCATCGTGGTCCTCCCCCACCTGCACCACCTGGAGGCCGTCCTGGGCCCCCACCCCCTATGCCATCTTGTCTACCACCTCCACCTCCCCCCAGCCACAGTCACAAGCCACCTCCTCCACCTATGGGTTGCGGTGCACCACCTCCACCTCCGCCcccacctcctcctccaccaccaTCTTCTTCAGCCAGTAACTTCCCCAGTAGTCCTGGCAGCTCagcaccacctcctcctccctccGGTGGAGGAGGACGAGGAACCTTACTGGAGGAAATTCGCCGTGGACGTGTGCTAAAGAATgTCTCTGAATCCCCGGACACTAATGCAGCTCCAGCTGAAGATGAATCTTCAGCGGGAATTGTGGGAGCTTTGATGATGGTGATGCAGAAAAGGAGTAAAGTTATTCATTCCTCAgaagatgaagatgatgacgGGGgcgatgaagatgaagaagatgaaTGGGACGAATAATGCTCTTGGTTTACAAACTTTTGCCATCCACCAATCCATAAAAATGAGCCGATAAAACTGATGCTCACTGGAAATTATTTTAGCAGGCTTGAAACCTATTCCAGATTAAAACTGCACTGAAGATCTTCTGTAAATCCGATTAAATCCAATAAAGCAAAACCCTGTGACAACGA
>XM_043246488.1
GTTCTCTTTTGCTGTGTTGCATTTACATCAGATTACAGAACACGGAAGCAACAGTTCCTTTCGAACCATTTGCCTGTTCTAAAAAGATTTCAGGCAGGTACTGTGGGCTAAGCAAGGGCCCCAGGCGTGGAGTCCCAAAATCTGTCCATTACATCAAGGAGAGATGAGCAAAGGAAAAGTCAAGGGGCAGGAGAACGTGCCTAGTTCTCTCCTCAGCAGCCAGGAGAATGAACGCCTGCTAGAGCTGCTGGGAAGGAGATGCGTGaccATGGCCACAGCAGTTGTTCAGTTGTACATGGCTCTTCCTCACAGTCCAACCCAATGGAGTCTCCAACATACAGGAGTTGTGTGTTTCGTTAAGGACAATCCTAAACGTTCATACTACATCCGGCTCTATGACATAAAGgaaAGTAAAATGGTTTGGGAGCAAGAGCTGTATAATCAGATGACATATTGCTGTCCAATGAGGTTCTTCCACACTTTTGCAGCTGATGACTGTCAAGTAGGTTTGAACTTTGCCAGTGAGACAGAAGCTGAATTTTTCAGAAACATCAGTGTGGAAAAGATTCATCAGAGATCCAATCGCCAGGaaaaaaaacagcatgctcCATCTGAAGAAAACCGGGCACTACCACAAATCCCTCCAACAAATGGTCCAGTTTCACAGCCAACTGTAATGGCCACAGTGGACATCCAGAACCCAGATATTGTGGCATCAAGGTACCGTTCCACCCCAGTGCCGACCCCCGCATCAGCCTCACTTTCCATAggcaaaaagaacaaaaagggAAAGAAGAAAGGTCCAAAGCTCACTAAGGCAGACATTGGAGCTCCTAGTGGATTCAAACATGTCACTCATGTTGGGTGGGATCCAAACTCTGGTTTTGATACCAACAATCTTGATCCGGACCTGAAGAAACTGTTCAACAGTGCTGGTATCAGTGATGCTGAGCTGGCAGACAAAGAAACATCTAAGATTATCTATGACTTTATCGAGCAATCTGGAGGCCTGGATGCTGTAAAAGAGGAAATGAGGAAACAGGaAGGTCCTTGTTCTGCTCCTGCACCTCCTCCACCTCGCGGTGGGCGTCCCCCAGTCCCAGGTCCACCCGGACGTCCTGCGCCACCTTCACGCAGCCCCGGACCCCCGCATCGTGGTCCTCCCCCACCTGCACCACCTGGAGGCCGTCCTGGGCCCCCACCCCCTATGCCATCTTGTCTACCACCTCCACCTCCCCCCAGCCACAGTCACAAGCCACCTCCTCCACCTATGGGTTGCGGTGCACCACCTCCACCTCCGCCcccacctcctcctccaccaccaTCTTCTTCAGCCAGTAACTTCCCCAGTAGTCCTGGCAGCTCagcaccacctcctcctccctccGGTGGAGGAGGACGAGGAACCTTACTGGAGGAAATTCGCCGTGGACGTGTGCTAAAGAATgTCTCTGAATCCCCGGACACTAATGCAGCTCCAGCTGAAGATGAATCTTCAGCGGGAATTGTGGGAGCTTTGATGATGGTGATGCAGAAAAGGAGTAAAGTTATTCATTCCTCAgatgaagatgatgacgGGGgcgatgaagatgaagaagatgaaTGGGACGAATAATGCTCTTGGTTTACAAACTTTTGCCATCCACCAATCCATAAAAATGAGCCGATAAAACTGATGCTCACTGGAAATTATTTTAGCAGGCTTGAAACCTATTCCAGATTAAAACTGCACTGAAGATCTTCTGTAAATCCGATTAAATCCAATAAAGCAAAACCCTGTGACAACGA
>XM_043246489.1
CTGTTCTCTTTTGCTGTGTTGCATTTACATCAGATTACAGAACACGGAAGCAACAGTTCCTTTCGAACCATTTGCCTGTTCTAAAAAGATTTCAGGCAGGTACTGTGGGCTAAGCAAGGGCCCCAGGCGTGGAGTCCCAAAATCTGTCCATTACATCAAGGAGAGATGAGCAAAGGAAAAGTCAAGGGGCAGGAGAACGTGCCTAGTTCTCTCCTCAGCAGCCAGGAGAATGAACGCCTGCTAGAGCTGCTGGGAAGGAGATGCGTGaccATGGCCACAGCAGTTGTTCAGTTGTACATGGCTCTTCCTCACAGTCCAACCCAATGGAGTCTCCAACATACAGGAGTTGTGTGTTTCGTTAAGGACAATCCTAAACGTTCATACTACATCCGGCTCTATGACATAAAGgaaAGTAAAATGGTTTGGGAGCAAGAGCTGTATAATCAGATGACATATTGCTGTCCAATGAGGTTCTTCCACACTTTTGCAGCTGATGACTGTCAAGTAGGTTTGAACTTTGCCAGTGAGACAGAAGCTGAATTTTTCAGAAACATCAGTGTGGAAAAGATTCATCAGAGATCCAATCGCCAGGaaaaaaaacagcatgctcCATCTGAAGAAAACCGGGCACTACCACAAATCCCTCCAACAAATGGTCCAGTTTCACAGCCAACTGTAATGGCCACAGTGGACATCCAGAACCCAGATATTGTGGCATCAAGGTACCGTTCCACCCCAGTGCCGACCCCCGCATCAGCCTCACTTTCCATAggcaaaaagaacaaaaagggAAAGAAGAAAGGTCCAAAGCTCACTAAGGCAGACATTGGAGCTCCTAGTGGATTCAAACATGTCACTCATGTTGGGTGGGATCCAAACTCTGGTTTTGATACCAACAATCTTGATCCGGACCTGAAGAAACTGTTCAACAGTGCTGGTATCAGTGATGCTGAGCTGGCAGACAAAGAAACATCTAAGATTATCTATGACTTTATCGAGCAATCTGGAGGCCTGGATGCTGTAAAAGAGGAAATGAGGAAACAGGGTCCTTGTTCTGCTCCTGCACCTCCTCCACCTCGCGGTGGGCGTCCCCCAGTCCCAGGTCCACCCGGACGTCCTGCGCCACCTTCACGCAGCCCCGGACCCCCGCATCGTGGTCCTCCCCCACCTGCACCACCTGGAGGCCGTCCTGGGCCCCCACCCCCTATGCCATCTTGTCTACCACCTCCACCTCCCCCCAGCCACAGTCACAAGCCACCTCCTCCACCTATGGGTTGCGGTGCACCACCTCCACCTCCGCCcccacctcctcctccaccaccaTCTTCTTCAGCCAGTAACTTCCCCAGTAGTCCTGGCAGCTCagcaccacctcctcctccctccGGTGGAGGAGGACGAGGAACCTTACTGGAGGAAATTCGCCGTGGACGTGTGCTAAAGAATgTCTCTGAATCCCCGGACACTAATGCAGCTCCAGCTGAAGATGAATCTTCAGCGGGAATTGTGGGAGCTTTGATGATGGTGATGCAGAAAAGGAGTAAAGTTATTCATTCCTCAgaagatgaagatgatgacgGGGgcgatgaagatgaagaagatgaaTGGGACGAATAATGCTCTTGGTTTACAAACTTTTGCCATCCACCAATCCATAAAAATGAGCCGATAAAACTGATGCTCACTGGAAATTATTTTAGCAGGCTTGAAACCTATTCCAGATTAAAACTGCACTGAAGATCTTCTGTAAATCCGATTAAATCCAATAAAGCAAAACCCTGTGACAACGA

Function

NR:

description
PREDICTED: wiskott-Aldrich syndrome protein isoform X1

GO:

id name namespace
GO:2000601 positive regulation of Arp2/3 complex-mediated actin nucleation biological_process
GO:0030595 leukocyte chemotaxis biological_process
GO:0003779 actin binding molecular_function

KEGG:

id description
K05747 WAS; Wiskott-Aldrich syndrome protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043246487.1 False 1790 mRNA 0.49 12 11743139 11747878
XM_043246488.1 False 1788 mRNA 0.49 12 11743139 11747879
XM_043246489.1 True 1790 mRNA 0.49 12 11743139 11747881

Neighbor

gene id symbol gene type direction distance location
gpr173 gpr173,LOC107731146,LOC107678674,LOC107549585,LOC107549979,LOC107745752 coding downstream 59514 11675274 ~ 11683625 (-)
nol4la nol4la,LOC107549982,LOC107731219,LOC107745834,LOC107680239,LOC107550513,LOC107668103,LOC108412512,LOC103039117 coding downstream 127868 11579162 ~ 11615271 (-)
ptk6a ptk6,LOC107731218,LOC107668051 coding downstream 167926 11569548 ~ 11575213 (-)
si:dkey-70p6.1 LOC107731205,LOC107668067,LOC107745762,LOC107549481,LOC107549992 coding downstream 239107 11481644 ~ 11504032 (-)
emilin3a LOC107668027,LOC107731182,LOC107549958,LOC107550125,LOC107695222,LOC107745820 coding downstream 291693 11445273 ~ 11451446 (-)
slc38a5b slc38a5b,slc38a5,LOC107668060,LOC107549975,LOC107731265,LOC107745748,LOC107678718,LOC107549617 coding upstream 1715 11749596 ~ 11764650 (-)
trnaf-gaa_1 NA coding upstream 49249 11797130 ~ 11797202 (-)
LOC122350200 LOC107731172,LOC107668058,LOC107549973 coding upstream 49887 11797768 ~ 11801654 (-)
inavaa si:ch211-163l21.4,LOC107731290,LOC107745811,LOC107678807,LOC107667997 coding upstream 80241 11828122 ~ 11837390 (-)
zgc:195245 zgc:195245,LOC107668117,LOC107549966,LOC107731284 coding upstream 90412 11838293 ~ 11840601 (-)
G63134 si:dkey-16n15.6,LOC107667993,LOC107549944,LOC108442380,LOC105898899 non-coding downstream 75659 11667166 ~ 11667480 (-)
G63127 NA non-coding downstream 78365 11663435 ~ 11664774 (-)
G63120 NA non-coding downstream 91235 11648509 ~ 11651904 (-)
LOC122350252 NA non-coding downstream 121934 11620447 ~ 11621205 (-)
G63076 NA non-coding downstream 181506 11560987 ~ 11561633 (-)
G63254 LOC106565120 non-coding upstream 73403 11821284 ~ 11823244 (-)
G63304 LOC107549947,LOC107731153,LOC107668018,LOC107591857,LOC107745734 non-coding upstream 107864 11855745 ~ 11856062 (-)
G63344 NA non-coding upstream 268845 12016726 ~ 12017351 (-)
G63347 NA non-coding upstream 271830 12019711 ~ 12019953 (-)
G63350 NA non-coding upstream 274634 12022515 ~ 12022753 (-)
G63095 NA other downstream 127214 11562278 ~ 11615925 (-)
LOC122350269 LOC107549994,LOC107731173,LOC107745767,LOC107695299,LOC107668028,LOC560461,LOC107549455 other downstream 397151 11284354 ~ 11345988 (-)
smim1 smim1,LOC107668050 other downstream 573666 11131670 ~ 11169473 (-)
LOC122349915 nphp4,LOC107550077,LOC107695281 other downstream 611901 11096140 ~ 11131238 (-)
cep104 cep104,LOC107668088,LOC107745778 other downstream 752404 10973305 ~ 10990735 (-)
G63274 nt5dc2,LOC107731170,LOC107549943,LOC107668043,LOC107550186,LOC107678756,LOC107745746 other upstream 30390 11778271 ~ 11779251 (-)
prok1 prok1,LOC107680267,LOC107711938,LOC107731240 other upstream 303476 12051357 ~ 12054530 (-)
G63385 NA other upstream 515813 12263694 ~ 12264533 (-)
kcnq2a LOC107679259,LOC107668096,LOC107731192,LOC107550457,LOC108442249,LOC108265949,LOC107711924 other upstream 594279 12342160 ~ 12363104 (-)
foxp3a foxp3a,si:ch211-167b20.8,LOC107669635,LOC107731227,LOC107550508,LOC107711972,LOC107679368,LOC107591799,LOC107591800 other upstream 741316 12489197 ~ 12504153 (-)

Expression


Co-expression Network