zgc:195245 (zgc:195245,LOC107668117,LOC107549966,LOC107731284)


Basic Information

Item Value
gene id zgc:195245
gene name zgc:195245,LOC107668117,LOC107549966,LOC107731284
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 11838293 ~ 11840601 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043246577.1
ATCTGGAATGGCGTAATGAGCTTGAACGTAATGTCTGCAACGAGCATCACTGAACATAAACAGCAGACGCTGAGTGAAGGCCACAGTCCTCACACTACTCGCACGATGCTGGACCTCAACACGACGAAAAAGCAGTCATCTGTATGCGTGGAGCGGCCAGGATTCAGACATCACAGAAAAGAGAATTTTGCGTGTAATTCTCCTGTGTCCCAGCAAAGCACAGACAGTGGAGATGAGTTCATTCAGCTCAGGAAACTGAATGGCTCACCCAGCGAGTGTCCCAGTCGCCAGAATCTCCATAAAGAGCTTCTGCTTGGCCACAAGAGGGGTCTGTTGTTGGAGGAGAAACCAGAATTGCAGCGCGTGTTACAGCAAAGGAGGCTTGACCTGCACCGAGAGGAGGAACTTGCCCTCCGACCTCCTTCTGACCTGGAACAAGAGCTCCGTAAAAGACAGCAGAAACTGCAAGAGTATGAGATGGAGGAACAGAGACGCATAGAGGATGAGAAGAATGTTCCAGAATTTGTACGAGTGAAAGAAAATCTGCGTCGCATACAGTTGACCGACTAAAACGACAAAGGACCTATGGAGAGGAATTGCGCCttgtaatttttactgttttcatataattaaaaagaatgttGAAAATAAGTTGCATACAGCAATAATGTAGTTTAGTAATGAAGCGCTctttaaatatactgaaatgttCTGTAAATGTGAGAATTAAAGCTATTAATGTCTTGTATAATA

Function

NR:

description
protein FAM107B-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043246577.1 True 753 mRNA 0.44 6 11838293 11840601

Neighbor

gene id symbol gene type direction distance location
inavaa si:ch211-163l21.4,LOC107731290,LOC107745811,LOC107678807,LOC107667997 coding downstream 903 11828122 ~ 11837390 (-)
LOC122350200 LOC107731172,LOC107668058,LOC107549973 coding downstream 36639 11797768 ~ 11801654 (-)
trnaf-gaa_1 NA coding downstream 41091 11797130 ~ 11797202 (-)
slc38a5b slc38a5b,slc38a5,LOC107668060,LOC107549975,LOC107731265,LOC107745748,LOC107678718,LOC107549617 coding downstream 73643 11749596 ~ 11764650 (-)
wasb LOC107731288,LOC107668059,LOC107745750,LOC107549977,LOC107678704,LOC107549603 coding downstream 90412 11743139 ~ 11747881 (-)
c8h1orf194 LOC107731283,LOC107668109,LOC107549965 coding upstream 580 11841181 ~ 11842852 (-)
lhfpl5b lhfpl5b,LOC107591869,LOC107745833,LOC107731128 coding upstream 43137 11883738 ~ 11891283 (-)
dclre1b LOC107731274,LOC107668110,LOC107550475,LOC107712006,LOC107678930 coding upstream 130140 11970741 ~ 11974829 (-)
adora1b adora1b,LOC107550463,LOC107711940,LOC107668012,LOC107591868,LOC107731293,LOC107680252 coding upstream 136599 11977200 ~ 11983309 (-)
zgc:110353 zgc:110353,LOC107680259,LOC107711939,LOC107591867,LOC107668023,LOC107731165,LOC107550464,LOC107711928 coding upstream 169887 12010488 ~ 12013150 (-)
G63254 LOC106565120 non-coding downstream 15049 11821284 ~ 11823244 (-)
G63134 si:dkey-16n15.6,LOC107667993,LOC107549944,LOC108442380,LOC105898899 non-coding downstream 170813 11667166 ~ 11667480 (-)
G63127 NA non-coding downstream 173519 11663435 ~ 11664774 (-)
G63120 NA non-coding downstream 186389 11648509 ~ 11651904 (-)
LOC122350252 NA non-coding downstream 217088 11620447 ~ 11621205 (-)
G63304 LOC107549947,LOC107731153,LOC107668018,LOC107591857,LOC107745734 non-coding upstream 15144 11855745 ~ 11856062 (-)
G63344 NA non-coding upstream 176125 12016726 ~ 12017351 (-)
G63347 NA non-coding upstream 179110 12019711 ~ 12019953 (-)
G63350 NA non-coding upstream 181914 12022515 ~ 12022753 (-)
G63321 NA non-coding upstream 263977 12104578 ~ 12139398 (-)
G63274 nt5dc2,LOC107731170,LOC107549943,LOC107668043,LOC107550186,LOC107678756,LOC107745746 other downstream 59042 11778271 ~ 11779251 (-)
G63095 NA other downstream 222368 11562278 ~ 11615925 (-)
LOC122350269 LOC107549994,LOC107731173,LOC107745767,LOC107695299,LOC107668028,LOC560461,LOC107549455 other downstream 492305 11284354 ~ 11345988 (-)
smim1 smim1,LOC107668050 other downstream 668820 11131670 ~ 11169473 (-)
LOC122349915 nphp4,LOC107550077,LOC107695281 other downstream 707055 11096140 ~ 11131238 (-)
prok1 prok1,LOC107680267,LOC107711938,LOC107731240 other upstream 210756 12051357 ~ 12054530 (-)
G63385 NA other upstream 423093 12263694 ~ 12264533 (-)
kcnq2a LOC107679259,LOC107668096,LOC107731192,LOC107550457,LOC108442249,LOC108265949,LOC107711924 other upstream 501559 12342160 ~ 12363104 (-)
foxp3a foxp3a,si:ch211-167b20.8,LOC107669635,LOC107731227,LOC107550508,LOC107711972,LOC107679368,LOC107591799,LOC107591800 other upstream 648596 12489197 ~ 12504153 (-)
zmynd12 zymnd12,LOC107591768,LOC107711949,LOC107679700 other upstream 1145053 12985654 ~ 13083372 (-)

Expression


Co-expression Network