fam110a (LOC107755603,LOC107703992,LOC107678459,LOC107570008,LOC107553114,LOC107752568)


Basic Information

Item Value
gene id fam110a
gene name LOC107755603,LOC107703992,LOC107678459,LOC107570008,LOC107553114,LOC107752568
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 22710095 ~ 22714115 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043246608.1
GAGTTTCTGATTGGATGGGACGAGAACAAAAAAAGGCATAGGAGGAGTGTGAGAAGAGAGTCGAACCGGTCTGGCAAGTTTTACTttctcaaacacaaacacacgcgtgCACCATCTGCCTTGCTTTCTTTCTGCTTTCTGACACACAAACGGCATTACTGACTGAATCCTGTCCTACGTGACTCAAAGGGGAAGCCGCGGCTGTCGAGTGTCCTGAAACAGACGCAGaCGGGATCATGTAGAGACATGTCTGTCCCTGGAATCTGTATTAAAAACGTGAATCCAGTGTCTGCAATGCATTAATGTGGAAGTAAACCCTGCCTGCAAGACTACTTACAAGCAAAtaagtacagaaaaaaagaaacagctgaagTTTTTCATTTCCAAGGATGTCAACTGACACACTTCAGCCATCTTCACGGAGAATAATAAGGCTTGCTGTAACTCCTGGCACTCCAAGTCGCAACCCAGAGTCCAGCTGTCCAGACAAATCATCTCCAGGCATACGCAAACCAAGTGCGGTGGAACGATTGGAAGCAGACAAGGCCAAGTACGTCAAGAGCCAACAGGTGGCTTTGAAGAAGCAGCAGCCAGTTATTTGTCCAGCCAACAACAGCCAAAGTGGACAAGGTGCTCAACAGCCATCAAGGAAGATTCCTGCAAGACCAACAAAGTCTGAGACGCCACCTCTTAACCTAGAACATCTCTGCAAGTTGATCAATGGAGTCAGCGATGCCACCGCTCCAGTCGTATCTATGCAGCCCAACAACAAAGACAAAGATGCTGCAGTTCCATGCAAGGCCACCCCTTCAACAGTGGAGGAATCTTCTCCGACCCCAACTTCAGCAAGTCAAGGAAAAGCTCCAGTAGAAGTCAGGGCGAGCGGGTGTGCTACCACGACAGTTCGGAGAGTCGACGTCAGGCCACAGTTACCTCAGATGAGGATGGCTGGTAGACAACAGCTACAGAACCGGCCTCCGGTGCAACAGACCACACCTCAGGTCCCAATACATCTTCTGCGCCTGCTTAGGCCGTACATACAACCAAATAAGCAACCAATTGATTTCAAAAGGCTCCATAATGCCACACAAACAAACGCCTCTCAAGGACCTATTAAAACGCCAAACTCTGCTGAGCAAACCTCACCGTCTTCCAAATCTCCAACCGGCCCACCTCTACCCCTCTCCATAAAACCAATCACAGAACCATCATCATGTCCCTCACCAACCCCACTTACTCCGAACTCCGTCGTCTCGCTTAAAAATGACTTCCAGTCGCCGCCATCTCCAGCCATCACCCGCCACTCCTCAACAAGCTCCAGGAAGCGTCCGTCCCTGACGCGCTCAAAATCCGACGTCAGCGACTGCTTTTCACGAGCAGGAGCAGAACTTGAGCGCTTCTTTAATTACTGTGGTCTTGACCCATCAGATTTAGACGAGCTAACGAGACCGGGTTCTGACATCGTGTCCGTTTCCCGTCTACGTAGCGCTAGTGCGCCGACCTCCGAGCGTCCGGCCGAAGGCGAAGACGAGGAAGAAGAAGCAGCAAAAGACGAACGCCCTGTTTACGGAGTGTCGGTCATTGAGAGAAATGCTCGAGTGATCAAGTGGCTTTATGGGATGCGTCAGGCCAAAGAGAGTCCCAAAGTGGCCGATATGTAACCTGTAACGATCAAGGAACTAACGAACAACCATTATTcagactgaaatgaaatgcaaaatatgcTGTACAAATTGCTTTCTTCCCAGTTCAGTGTTTTGTTTCCTATCTGTATATTTTAGAGTTGTCTTGTGgaaacttgtgtgtgtgtcatatgaAATATGCTTGTAGCCACGTGTTCTCAAACAATAGCTAAGCATGCATGGTTATGATGACCACcaataaactcttaaaaacCA

Function

NR:

description
PREDICTED: protein FAM110A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043246608.1 True 1898 mRNA 0.49 4 22710095 22714115

Neighbor

gene id symbol gene type direction distance location
prickle3 LOC107752556,LOC107678453,LOC107755595,LOC107703993 coding upstream 537 22673889 ~ 22709558 (+)
plp2b plp2,LOC107570007,LOC107755602,LOC107553143,LOC107752558,LOC107678458 coding upstream 36813 22661149 ~ 22673282 (+)
sypb sypb,LOC107553146,LOC107664463,LOC107755600,LOC107678440,LOC108426646 coding upstream 50848 22647848 ~ 22659247 (+)
LOC122351043 LOC107757082,LOC107703982,LOC107757083,LOC107757080,LOC107575601,LOC107678397,LOC107752574 coding upstream 151900 22554867 ~ 22558195 (+)
LOC122349889 LOC107748971,LOC107710781,LOC107678464,LOC107698851,LOC107595755 coding upstream 161037 22541798 ~ 22549058 (+)
LOC122350040 NA coding downstream 230095 22944210 ~ 22946154 (+)
plod1a plod1a,plod1,LOC107698842,LOC107678430,LOC107748983 coding downstream 242754 22956869 ~ 22968973 (+)
nppal zgc:195023,LOC107595800,LOC107748995 coding downstream 708557 23422672 ~ 23423662 (+)
nppb LOC107687134,LOC107748982,LOC107595789 coding downstream 711793 23425908 ~ 23427204 (+)
nppa nppa,LOC107691053,LOC107602452,LOC107595801,LOC107687143 coding downstream 714800 23428915 ~ 23430926 (+)
G66189 NA non-coding upstream 178345 22530253 ~ 22531750 (+)
G66183 NA non-coding upstream 196850 22512179 ~ 22513245 (+)
G66024 NA non-coding upstream 421248 22288308 ~ 22288847 (+)
G66022 NA non-coding upstream 424663 22283734 ~ 22285432 (+)
G66014 gfpt1,LOC107678434,LOC107752562,LOC107562636,LOC107710818,LOC107553119 non-coding upstream 535031 22170639 ~ 22175064 (+)
G66261 NA non-coding downstream 85524 22799639 ~ 22800154 (+)
LOC122350789 NA non-coding downstream 195532 22909647 ~ 22911382 (+)
LOC122350915 NA non-coding downstream 515928 23230043 ~ 23231024 (+)
LOC122350913 NA non-coding downstream 517449 23231564 ~ 23239812 (+)
G66344 NA non-coding downstream 523862 23237977 ~ 23238253 (+)
LOC122350000 ddx51 other upstream 169862 22532468 ~ 22540233 (+)
G66011 naa35,LOC107752550,LOC107757435 other upstream 589299 22119913 ~ 22120796 (+)
G66010 naa35,LOC107757435,LOC107752550 other upstream 592261 22116283 ~ 22117834 (+)
LOC122350768 LOC107710831,LOC107553156,LOC107562655,LOC107678394 other upstream 745532 21963465 ~ 21964563 (+)
G65995 NA other upstream 748250 21949888 ~ 21961845 (+)
mfsd2al2 NA other downstream 1264 22715379 ~ 22723908 (+)
fkbp1aa fkbp1aa,fkb1b,fkbp1a,LOC107574256,LOC107553142,LOC103030299,LOC107752559,LOC100705189 other downstream 10467 22724582 ~ 22727444 (+)
wrap73 LOC107748967,LOC107698846,LOC107595759,LOC107678416,LOC107602469,LOC107710786 other downstream 185321 22899436 ~ 22925768 (+)
mfn2 mfn2,LOC107748965,LOC107602467,LOC107710790,LOC107678429,LOC107698839,LOC107595787 other downstream 259880 22973995 ~ 22987162 (+)
prdm16 prdm16,si:ch211-263k4.2 other downstream 340501 23054616 ~ 23401562 (+)

Expression


Co-expression Network