LOC122350265 (rasal1)


Basic Information

Item Value
gene id LOC122350265
gene name rasal1
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 1456231 ~ 1481554 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043246611.1
ATCAGCATCTCATCCTCACCTGAGAACAGACACGGGGGCATCACGACTCGCATCACGCCCGGTATAATAACCGCAGAAATATAATCACGCCACAGAGGATGAGACGGGTCGATGGATCCGACCAGGCGATGGAGGTCTTCTAGGAGGTCGGTTCGGGGTCTGCTCTTTCATGACGTTCCCCGGAGCAGCCCGGACCTGAAGCTCTGATCCAGACCTGGAAGATCTTCAGTGACATGAGGCTGATCATGGCCAGAAACACTTCTCTCTACTTTCGGATCGTCGAGGGACGGAACCTGCCCGCGAAAGACGTTTCTGGGACCAGTGATCCATACTGCATCGTCAAAGTTGATAATGAAGTCGTGgccagAACCGCCACCGTCTGGAAGAACCTGAACCCGTTCTGGGGCGAGGAATACACCCTTCACCTGCCCATGGGCTTCCATACGCTCACCTTTTACGTCATGGATGAAGACACCATCGGTCACGATGACGTGATTGGCAAAATCTCCCTGAGCAAAGATGTGATTGCCGCTCAACACAAAGGTTTAGATAACTGGCTGAACCTGACGCGTGTGGATCCCGATGAAGAGGTTCAGGGGGAGATTCATCTGTCTCTGGAGCTGCACAGAGAAGCTCAGAGAAGCCGCCTGCGCTGCCACGTCATCGAGGCCCGGGATCTGGCTCCGCGTGACATTACCGGGACCTCTGATCCATTCACCAGAATCATCTACAACAACCTCAGCGCTGAGACATCGATCATAAAGAAGACGCGCTTCCCGCACTGGGATGAGACGCTGGAGTTGAGTCTGGATGAaggtgatgatgaagatgatgacgatggtgatgatgatgatgatgatgggagGGTGACGGTGGAGGTGTGGGACTGGGACATGGTGGGCAAGAACGACTTCCTGGGAAAGgtggaGATCCCTCTGTCGTGTCTGCACCGATCTCCTCCGATGCAGGGCTGGTTTCGCTTGCTGCCGCTGGGAAACACGGAGAACGACgccggAGGTAAACTGGGTGCTCTGCGTCTGAAGGTGCGTTTGGTCGAGGAGAGGATTCTTCCGTCGGTGTATTACCAGCCTCTGATCGAGCTGCTGGTGGAGGCCGTCCTCTCGCCGTCAGAgGCGGACGAGCCCACGCCGCTGACTCTGCTGGAGGAGGTGACCACGGTGGAGAGCAGGCAAGACGTGGCCATGACGCTGGTCAAGATCTATCTGGGGCAAGGTCTGGTGGTGCCTTTCCTGGACTACCTCAACACCAGAGAGGTTCACAGCAccaCAGATCCAAACACACTCTTCCGGTCCAACTCGCTGGCCTCCAAAGCCATGGAGCAGTTCATGAAGgccGTCGGGATGCTGTATCTGCACCAGGTTCTGAAGCCCATCATCAACCGCATTGAGGAAAGGAAATACGTCGAGCTGGATCCATGCAAGATAGACCTCAACCGATGCAGGCGCATCTCGTTCAAAGGCTCTGCGTCGGAGGCCGAGGTCCGGGAGAGCAGCGTGGGGCTCCTGCAGACGTATCTCAGCAGCATCATGGAGGCCATCGTCAGCTCGGTGTCTCAGTGTCCTTCTGTGATGAGAGTCGTCTTCAAACAGCTCCACAAACGCGTGGAGGAACAGTTTCCGGAACCGGAGAACGAGGATGTGAAGTACTTGGCCATCAGCGGCTTTTTCTTCCTGCGTCTGTTTGCTCCTGCGATCCTGACGCCCAAACTCTTCCAGCTGAGAGATCATCACGCAGACACCAGGACCAGCAGAACCCTGCTGCTGCTCGCTAAGGCTCTGCAGAGCGTGGGCAATCTGGGCCTTCAGCTGGGGCATGGGAAGGAGCAGTGGATGACCCCTCTGCATCCCATCATCCTTTGCAGCGTGGCGTCCGTCAAAGATTTCCTGGACAAACTCATTGACGTCGATCACGACAACGTGTGTGAAGCTCCTCAGCGAGCCGTGTTTCTGCCCTCGGTCATCGTAAAGGAAGGTTTCCTGCAGAAACACAAAGCTGAAGGACCTCGGAAACGCTTCGCTTTTAAGAAACGATATTTCTGCTGAGTTCAAGTCGCTGTCGATAAGAGTCCCGACTGGCagggtcGCTCCAGTATACCCAtagcgtgtgtgtgcgcagtgGAGCGCGTGGATGAAAACGCCTTTCAGCTCCAGAATGTCATGCAGGTCATTACACAGGACACGGACGGACAACCACACACCACATACCTGCAGTGcaagaatgTAAATGAGCTCAATCAGTGGCTATCGGCCATCAGGAAGGTCAGTATTTATAATGAACACATGCTGCCGTCTTTTCACCCCGGAGCTCATCGAGGAAACAAATGGACCTGCTGCCTTCAGCCCGAccgcacagcgccGGGCTGCAGTCGGACTCATTCGGCCGTGACTCTGGGCGACTGGAGCGACCCGTTAGATCCTGATGCTGAAACACAGATCATTTATAAAGAACTGCTGCAAGGACGAGATAaactcagGAAGCAGTACCTGGAGACACAGGAAGTGGAGGCggaggaacaggaagtagcgCCGTCATCAGtgtgtgttcagggcCGATCCGAGCGCTCCCGGGCCCTCGCCGCTCGTCTCCTGGACGTCGTGCTGGATCTGGAACGAGCTCATTCGTCCTTCCAGAGCCGAGAAGCAGACCAGAGCCGGCCGCTCATCCTGAGCTCGTAGACACGCTCCCGCTGCCCGATCACATTATGCAATGTTTTCCAATCGAACTCGACTTATTGATGAATGTCCGTGGAAATATTTTTACGTATTCGTAACCttgaagtgtttttattatcttgacGCTCTGGGGTGATTTTTTTACGGAGGGCCAAATTACtccaaattaaataattaaataaatgtta

Function

symbol description
rasal1 Predicted to enable GTPase activator activity; metal ion binding activity; and phospholipid binding activity. Involved in positive regulation of dendrite extension. Located in cytosol. Colocalizes with plasma membrane.

NR:

description
PREDICTED: rasGAP-activating-like protein 1

GO: NA

KEGG:

id description
K17632 RASAL1; RAS protein activator-like 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043246611.1 True 2881 mRNA 0.54 23 1456231 1481554

Neighbor

gene id symbol gene type direction distance location
spats2 LOC107749411,LOC107701385,LOC107573793,LOC107661167,LOC107572966,LOC107728257 coding upstream 189997 1253631 ~ 1266234 (+)
LOC122350095 NA coding upstream 213073 1236932 ~ 1243158 (+)
trim36 trim36 coding upstream 220654 1219724 ~ 1235577 (+)
LOC122350068 ccdc112,LOC107573794,LOC107578772 coding upstream 246588 1204241 ~ 1209643 (+)
LOC122350615 fem1c,LOC107728259,LOC107572967,LOC106580179 coding upstream 256294 1188348 ~ 1199937 (+)
LOC122351062 NA coding downstream 77566 1559120 ~ 1560367 (+)
LOC122350660 NA coding downstream 166924 1648478 ~ 1649618 (+)
serpind1 serpind1,LOC107671000,LOC107738496,LOC107559590,LOC107722856,LOC107698014,LOC107560052 coding downstream 321141 1802695 ~ 1807402 (+)
snap29 snap29,LOC107722859,LOC107560055,LOC107726963 coding downstream 341082 1822636 ~ 1827411 (+)
LOC122350512 NA coding downstream 455207 1936761 ~ 1946949 (+)
G59914 NA non-coding upstream 62803 1392143 ~ 1393428 (+)
G59899 NA non-coding upstream 187557 1268438 ~ 1268674 (+)
G59898 NA non-coding upstream 187839 1268184 ~ 1268392 (+)
G59877 NA non-coding upstream 291455 1162420 ~ 1164776 (+)
G59876 NA non-coding upstream 295071 1156922 ~ 1161160 (+)
G59938 NA non-coding downstream 77578 1559132 ~ 1648740 (+)
G59940 LOC102197881,LOC106633085 non-coding downstream 79905 1561459 ~ 1694820 (+)
G59939 NA non-coding downstream 101435 1582989 ~ 1780567 (+)
G59952 NA non-coding downstream 114158 1595712 ~ 1792467 (+)
G59953 NA non-coding downstream 119794 1601348 ~ 1799170 (+)
pggt1b pggt1b other upstream 237427 1210815 ~ 1218804 (+)
znf608 znf608,LOC107574328,LOC107697597,LOC107712568,LOC107704598,LOC107573349,LOC107726216 other upstream 604227 842077 ~ 852004 (+)
G59807 NA other upstream 651392 803653 ~ 804839 (+)
cdc14b cdc14b,LOC107661524,LOC107704583,LOC107568104,LOC107726879,LOC107570987 other upstream 905544 537775 ~ 550687 (+)
G60259 LOC107560031,LOC107559593,LOC108412499,LOC107754396 other downstream 433906 1915460 ~ 1918371 (+)
polb polb,LOC107670984,LOC107722860 other downstream 533305 2014859 ~ 2020034 (+)
LOC122350053 NA other downstream 549270 2030824 ~ 2035980 (+)
LOC122350758 dynll1,dynll2a,LOC103397138,LOC100698873,LOC107559583 other downstream 556145 2037699 ~ 2039836 (+)
G60788 lhfpl4b,LOC107584928,LOC107674308,LOC107743140,LOC107727430,LOC107701811,LOC103032126,LOC105898894 other downstream 2367060 3848614 ~ 3850557 (+)

Expression


Co-expression Network