asgrl1 (LOC107580964)


Basic Information

Item Value
gene id asgrl1
gene name LOC107580964
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 18075597 ~ 18079483 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043246661.1
ACCTAGTATAACAAGCAGACAAAGAAACagataatgaatgaattacGATAATTCGTTTTGTGATATTTCGCACACACGTGAGACACAAGCGTTACAAAAAGACCAATAGGATATTGGGACTGTCAGTTCCGGCCTCAGAAATGGTTAGGAGCCATTGCGTAAGGACAGAATCACAGAGAACAGCCATCAGGACACTGACCGCAACCGAGGAGAGGAAGCCCACTGAAACAGTCACTTTTAACAACATGGAAACGGTATCATATGACCGGTTTAGCACAATTGAGGCAGAAATTAATCAGGCTggccaaaaatgtatatatcaatcaggtagacagaaaagaaagatgtACATTCTATATGGAGTTCTCATCCTCTATGTGTTTATACTCACTCTGGCTCTAGGAATTAAAATCTCTCAGGTCAGCCGAGATGTCGCCGATCTGAGAGTTTTGCTGAAGTCCTCCGAAACATTTGAAAATGCTCATTTCTCTGAACGTGTGATGGCGGTGCAAGGTCCCTGTCAGGAAGGCTGGGTGTTTTATGAAGACTCATGCtattttcagtcttcagtgaaGAAGAACTGGCAAACTGCTGAGAAAAACTGCGTAGAGAAAGGATCGCATTTAGTGGTTGCCAATAACCTGGCTGAGATTGACTTCCTGTCTTCATTCGTGAAGTTGTCTGATAGCTACTGGATCGGGCTTGTTGAGAAAGAAGAGGGACAGTGGACCTGGGTAGATGGAACGGACTTTAGTGCTACTGAACACCACTGGGACATGGGTCAACCAGATGACTGGGATGTCAGAGTGAACGGTGAAGATTGTGGGCAGCTTCATGCCCGGATAACTGTGGAAGGACGGAGGCTGTGGAATGATGCAGACTGTACCCTTCCTTACCCTTACATCTGTGAGGGCAAACCCAAGAGCCACTGACAAACATCAACTAACTTCCAACATTGCAAAAATCATTTCTTTGGTCcctttttttccagtaaaaatatctgaacatccttaaaacaagatatatttatttgagaaCCAAACTTTAGATGTGTGTATTGAACGAATGTATGAATTGGAAGCTGAATTGATGTTGTtggtggttttttttctttttctaaatttaaaCAGCAGAACATTTTATGCTTAAACAATTCACTAGTGGGGAAAAACAAATATCACTTCATCACTTCAAGGTAATGTGTCTTTCATCTAAAAAACTAATGTGAATGACTGGTTTTCCTGCAGGATTACAACAATTTAagtatgtttaaattaaatactttaagtatgtttgtttaatttattagaaGTTATATTATGATTCTGTTTCAgtaattgcatacattttttttaaaccatgcaCATCTTGTTTTAAGCGCAAACCACCGATtggaagaaaatacattttaaaaatgaaataagatatacattttttaatggtttgttatGTTCCtgccttatgttaaactgctttcaATTACACCATAAtgcaaaagcacaaacacaacTGTCTACTTtgtaaattctttaaaaaaaatgaaataaaatgaaaaaagtacatTGCATAACTATTCATACCCTTAAATTAGCACTTAGCTGAAGCAGCTTTAAAGTCTCAAGTCTTTTTGGTTATGAAGTGACAAGCTTTGCTCTTCTCTCCTCTTCACCTCAcaagctctgtcaggttggattGGGGCAGATGCACATTTTCAAGTTTCTctagaaatatttgattgggttCAGTCCCAGGATCTGGCCGAGCCACTCCAGGACATTGACAGAGTACTTTATAAGCCACTCTTGCTGTGTGCTTAAggtcattgtcttgttggaagGTTAACCTTCTGCCCAGTCTGAGGTTCTAAATGCTCTGGACTGGTTTTTCATTAAAGTTTTTGAAAGGGTTTTCATTATCTCAGTATTTTGGTTCATTGAGCTTTTCTTCGACTCTAACAAGTCCCTCAGTCCTTTCCACTAACAGCTCCACAGCATAAGGCTGCTAACAGCCCAATTTACTTTTCACGTTTCCTTCATATATGATGCTTGGAATTGAGGTTCATCGGACCAGAGAATCTTGTTTCTCCCAGTCTGAGGGTCCTTTAAGTGCTCTTTTTGCACATTCCATGTCTTCGCTGAGCAGAGGATTGACTTTTGCCACAAACTCACTGCCATAAAGCTCAAATCAGTGATGTTTGTTCTTCTGTAGATTTCTCCAAATATGATCATGAAGCTCAACAAAAGTGACCATCAGGTTCTTGGTCACCAGTCTAGACAAAGCCCTTCTCTCTCAATTGCTCAGTTTGGCCAGGAGGCTAGATCTAGGAAGAGTCCtggttgttttaaatatgtgtggCTTAATGCAATCCTGTTTCTGAGCTCTACAGGCAGTTTTTTTACTACCTCAAAACATAACTATTCGATTAAATGTGCCACTCAAAGTGTAGTTGATatgggtatgaatacttttgcaatagaataggttttttttttcaatgtatttgcaaagatgttaaaacagtttttttttctttcacattatGGTGTATGAATTCTATCACAAGAAACTGTATTCTCCGAAGTCTTAGTATCTAACACTACATATATAACTAtgtttactggaaaaaaaagactaataatttttaaaaagtaatactttaattgcatgaataaattaacatataAGATCAAA

Function

NR:

description
CD209 antigen-like protein C isoform X1

GO:

id name namespace
GO:0030246 carbohydrate binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043246661.1 True 2691 mRNA 0.38 8 18075597 18079483

Neighbor

gene id symbol gene type direction distance location
si:dkey-63d15.12 NA coding downstream 19320 18053359 ~ 18056277 (-)
LOC122350049 LOC107748126,LOC107553823,LOC107687983,LOC107549670,LOC107697074,LOC107697075 coding downstream 369106 17701512 ~ 17706491 (-)
crybb2 crybb2,LOC107565327,LOC107753119,LOC107684510,LOC107553840,LOC107687964,LOC107748132 coding downstream 376182 17697175 ~ 17699415 (-)
slc23a2 slc23a2,LOC107753122,LOC107687958,LOC107684505 coding downstream 477750 17569420 ~ 17597847 (-)
rassf2a rassf2a,LOC107687959,LOC107553834,LOC107742747 coding downstream 507988 17552520 ~ 17567609 (-)
si:ch211-170d8.8 LOC107712454,LOC107687991,LOC107550941,LOC107554434 coding upstream 462 18079945 ~ 18082617 (-)
LOC122349911 LOC107569538,LOC107747839,LOC107694233,LOC107554410,LOC107703160 coding upstream 52011 18131494 ~ 18143145 (-)
LOC122351022 NA coding upstream 78814 18158297 ~ 18162389 (-)
c8h12orf43 NA coding upstream 106775 18186258 ~ 18188684 (-)
unc119.1 unc119b,unc119.1,LOC107753165,LOC107712459,LOC107550938,LOC107687994 coding upstream 111012 18190495 ~ 18196236 (-)
G64942 lzts1,LOC107712471,LOC107687967,LOC107550927,LOC107554439,LOC107753115,LOC107703152 non-coding downstream 42871 18029535 ~ 18032726 (-)
G64777 NA non-coding downstream 329673 17745685 ~ 17745924 (-)
G64757 NA non-coding downstream 410465 17661349 ~ 17665132 (-)
LOC122350842 NA non-coding downstream 414619 17657809 ~ 17660978 (-)
G64724 NA non-coding downstream 662725 17411009 ~ 17412872 (-)
LOC122350292 hnf1a,LOC107687971,LOC107550982,LOC107712475 non-coding upstream 16612 18096095 ~ 18103013 (-)
G64966 NA non-coding upstream 46702 18126185 ~ 18128804 (-)
G64992 NA non-coding upstream 206002 18285485 ~ 18285734 (-)
G65010 NA non-coding upstream 285956 18365439 ~ 18365779 (-)
G65011 NA non-coding upstream 287943 18367426 ~ 18367640 (-)
kcnip3a kcnip3a,LOC108440810,LOC107684506,LOC107553838,LOC107566017,LOC102307840,LOC108264878,LOC101482209,LOC103397788,LOC107753121,LOC107687962,LOC102210345,LOC108233759,LOC102228939,LOC102799407,LOC104951840,LOC102798027 other downstream 430086 17601258 ~ 17645511 (-)
LOC122350953 NA other downstream 674369 17320376 ~ 17401228 (-)
zgc:194007 NA other downstream 713747 17359385 ~ 17361850 (-)
LOC122350945 drd2b,LOC107745132,LOC107705176,LOC107691748,LOC107664308,LOC107600777,LOC107556418,LOC108428674 other downstream 978802 17046467 ~ 17096795 (-)
LOC122350093 NA other downstream 1665901 16407834 ~ 16409696 (-)
LOC122350290 LOC107569538,LOC107747839,LOC107554410,LOC107703160,LOC107694233 other upstream 27970 18107453 ~ 18112701 (-)
G64967 NA other upstream 75652 18155135 ~ 18157543 (-)
tbc1d10aa tbc1d10aa,LOC107657331,LOC107712481,LOC107550973,LOC107753095,LOC107703173,LOC107554420 other upstream 311180 18390663 ~ 18401938 (-)
G65033 NA other upstream 480184 18559667 ~ 18560334 (-)
LOC122350102 LOC107717958,LOC107676625,LOC107550916,LOC107682323,LOC107659265 other upstream 944230 19023713 ~ 19047969 (-)

Expression


Co-expression Network