LOC122350319 (LOC107574771,LOC107751454,LOC107669655)


Basic Information

Item Value
gene id LOC122350319
gene name LOC107574771,LOC107751454,LOC107669655
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 14173054 ~ 14175823 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043246691.1
ATAGAAATGCACTTTCACTCAGCACACAAGGTGGTCATGGAGTCGAGAGTCTTCTGCCTGCTGTTGCTCTACTGCTCTATCAACATCTGCAACGTTTATCCACTCATTCATCCCAGTAATGGACTCAATGAATGTCATAAAAACTCACCTTTGCCAGCTCTGGAGGTTCTTCCAGGAGGAGGCTGGGATAACCTGCGCAACATAGACATGGGCCGGGTGATGAATCTGAGCTATTCCCAGTGCCAGACAACAGAAGACGGTGTCTATCTCATTCCAGATGAAGTTTTTGTGATTCCACAGAAAGTGAGCGGAGTGGAAACAAACTCTGAGATCATCATGTCATGGATGGACCAGACAAGCTCCACATCTAGCTCCATCAATGCAGATGCTTCCTTTCCTCTGGTGCTCAACGGGAAATTTTCCAAAGAAAGCCAACGTGTTAAAACCCACCAAGTGAAGGAGAGTTCTGCAACAGCACGCGTTCAAGTCCGTAACCATCTGTACACAGTAAAGCCGTATCCCAACTTCCCTTTTGACATCCGCTTTGCTCAACAGGCAAGGGAGATCGCAGATGCTATTAAGAACAACCAAACACGTCTAGCAACGTATCTGTCAGAGAAACTCATTCTTGATTATGGTACTCATGTCATCACAAGTATTGATGCAGGTGCCATTTTGGTGCAAGAggactatttaaaaatgtcttttgtcaCAAAGAATCAGCTACAATTGTCTTCTCTTTCTGCATCAGCAGGTCTTTCATTTTTTGATAAACTTAAATTTGATTTTGGCAGCAGTGGATCACAAAACTACTCTCAAATCAGTGGTTATCAGAGCAACATCACATATTCCTTAATTCAGAGTCAAGGAGGGGCTTTATTCTACCCAGGCATCACTCTGCAGAAGTGGCAAGAGAGTACACTCAATAATCTGGTGGCCATTGACCGCTCTGGGCTGCCCATTCACTATTTTCTGAATCCATCAGCATTCCCAGACCTCCCAGTACCAGTAGTGAATAAATTAGCTTTGTTGGTTTCTCAGGCAGCAGAGCAGTACTATAAAGTAAATACCATTCCAGGGTGTATCAGTCCAGATTCCAAAAACTTCAATTTTCAAGCAAACGTAGACGATGCATCTTGTGAGGGCCCACTCACTAATCTTAGCTTTGGTGGCGTTTACCAACGATGCACTGCACTGACATCAGATGGAAGCACAATCTGTGATGACACAGCACAGACAAACCCAGCTACTGGTGTTTATTCTTGTCCTTCACAGTACAACTCCACCCTGTTACGCACTGAGACAATAGAAGTAGGTTATACTCGTTACGAGTGCCAAAGAAACTGTCGTTCATGTGGTTTCTTGTGGTTGTCCACTTGTTGTGACCAAACATGTAATGATGTATACTATGTTCGCCGTGCAAAGGTGGACACTTACTGGTGTTCCACAGTTCAGAGAACCCCTGTAAACTCTGGATATCTCTTTGGAGGCCTATATGGACCGTCTTTGCAAAATCCAATTACCAAATCTTATGGCTGTCCTCCAAATTTCTTTGTCCAAAAGTTTTTGTCTAGTGGTTTGATGGTTTGTCTGAGCAATGATTATGTCACAGCAACTAAATCCTCCGTGCCTTTTGGTGGTTTCTTCAGCTGCCAATCTGTCAACCCTCTCTCAAATGGTCAGTCTCGCTGTCCACCTCAGTTCAGCCAACAACTAGCTGCCATAAGCGACGGTTGTGAGATATTGTACTGCGTCCAGTCGGGTGTATTCAGCGGTGGTCAGTTAAAACCTGTTCGTCTCCCACCATTCACAAGCCCACCGCTGATCGGCATGACTGCCACCAACTCTGTAGCTGTAATGACAGATGGTAATGTTTCCTTGGTGAGAGCTGGAGAAACAAGGACATGGCAATTGGCAAATCCTGttgaaattaatcaaatgtttgaGAAGTCTGGAGGAGACAAGGCTGGTGTGACCTATGGTCTGATAGCTCTAATTACTCTTGAGGTATCAGGATTGCTTGTTTAATGCGTATAAAGAGGTTTTCATACCTTGAGGGGgaatttgtaaacaaaattgACATTGTCAGgaagaacaaatgaatgaaaaagctAATTATCATAATTGCTAGAATTATAGTCATATTACAAAGTGATTGACACAAGTACATGGGTATAGGTTCAAGGATgtttatagtttaaaaagaaaaaaatcattattgttATCGTTAATTATAATAGCGGTGGTAGTACTACTATATTATTAGCAAAGTTATCcaactatatacagtatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatataaaatcaaaacaa

Function

NR:

description
PREDICTED: macrophage-expressed gene 1 protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043246691.1 True 2367 mRNA 0.41 2 14173054 14175823

Neighbor

gene id symbol gene type direction distance location
cebpb cebpb,LOC107556312,LOC107669676,LOC107751442,LOC107594515,LOC107679873,LOC107711812 coding downstream 531572 13639945 ~ 13641482 (-)
adipor1b adipor1b,LOC107751445,LOC107679819,LOC107594512,LOC107711855 coding downstream 557716 13608854 ~ 13615338 (-)
LOC122351021 klhl12,LOC107679803,LOC107556315,LOC107711853,LOC107751446,LOC107594517 coding downstream 564777 13599250 ~ 13608277 (-)
tuba5 tuba8l,LOC108265838,LOC108425079,LOC107679810,LOC107711852,LOC107594520,LOC103031418 coding downstream 575207 13593701 ~ 13597847 (-)
kdm5bb LOC107751449,LOC107556320,LOC107711851 coding downstream 581878 13571079 ~ 13591176 (-)
LOC122350320 prf1.5,LOC107751453,LOC107574770,LOC107594505,LOC107711865,LOC107679935 coding upstream 5709 14181532 ~ 14186141 (-)
mpeg1.1 mpeg1.1,LOC107724877,LOC107669601,LOC107602834,LOC107679909,LOC107724864,LOC107751428,LOC107602817 coding upstream 11606 14187429 ~ 14190244 (-)
LOC122349900 LOC107724883,LOC107580262,LOC107669607 coding upstream 18010 14193833 ~ 14194501 (-)
slc20a2 slc20a2,LOC107724891,LOC107669617,LOC107602837,LOC107594502,LOC107711867 coding upstream 49533 14225356 ~ 14259044 (-)
ercc6l2 LOC107669670,LOC107724913,LOC107602840,LOC107689281 coding upstream 97713 14273536 ~ 14285846 (-)
G63955 grid2,LOC107568412,LOC107751431,LOC107594506,LOC107680191,LOC107711862 non-coding downstream 35631 14131391 ~ 14137423 (-)
G63956 grid2,LOC107669587,LOC107711862,LOC107751431,LOC107680191 non-coding downstream 44632 14128189 ~ 14128422 (-)
G63963 NA non-coding downstream 55052 14117730 ~ 14118002 (-)
G63962 grid2,LOC107669587,LOC107751431,LOC107711862,LOC107680191 non-coding downstream 72903 14099665 ~ 14100151 (-)
G63944 NA non-coding downstream 110314 14062497 ~ 14062740 (-)
G63975 NA non-coding upstream 27223 14203046 ~ 14203270 (-)
G63976 NA non-coding upstream 27819 14203642 ~ 14203921 (-)
G63979 NA non-coding upstream 89349 14265172 ~ 14265635 (-)
G63980 NA non-coding upstream 89903 14265726 ~ 14266043 (-)
G63981 NA non-coding upstream 92781 14268604 ~ 14269763 (-)
G63933 LOC107556304,LOC107751435,LOC107594508 other downstream 309804 13809428 ~ 13863250 (-)
mc3r mc3r,LOC107751459,LOC107669608,LOC107711834,LOC107680356 other downstream 452540 13716628 ~ 13720514 (-)
tafa3b si:ch211-254n4.3,fam19a3,LOC107711931,LOC107591764,LOC107562776,LOC107669582,LOC102289964,LOC104918365,LOC106582736,LOC105921069,LOC106517667,LOC108231490,LOC106937909 other downstream 926924 13185867 ~ 13246130 (-)
zmynd12 zymnd12,LOC107591768,LOC107711949,LOC107679700 other downstream 1089682 12985654 ~ 13083372 (-)
foxp3a foxp3a,si:ch211-167b20.8,LOC107669635,LOC107731227,LOC107550508,LOC107711972,LOC107679368,LOC107591799,LOC107591800 other downstream 1668901 12489197 ~ 12504153 (-)
LOC122350784 zgc:162939,LOC107602843,LOC107674500,LOC107724903 other upstream 209777 14385600 ~ 14455243 (-)
slc20a1a slc20a1a,LOC107724894,LOC107711884,LOC107686402,LOC107667554,LOC107602858,LOC108440301 other upstream 547889 14723712 ~ 14731391 (-)
G64228 NA other upstream 603708 14779531 ~ 14781710 (-)
G64353 hmcn2,LOC107723245,LOC107659581,LOC107570300 other upstream 1108038 15283861 ~ 15284130 (-)
mvb12bb mvb12b,LOC107550570,LOC107753158,LOC107723228 other upstream 1473403 15649226 ~ 15700896 (-)

Expression


Co-expression Network