LOC122350362 (LOC107687124,LOC107727989,LOC107594958,LOC107727992,LOC107687125)


Basic Information

Item Value
gene id LOC122350362
gene name LOC107687124,LOC107727989,LOC107594958,LOC107727992,LOC107687125
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 23967525 ~ 23972075 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043246765.1
agagagagagagagagagagagagtacgaGAAGGACTCAAATTTAATCTGTCATTATTATTGGATGAGGGAATAGAAGGAAGTCTGTCTAAACTTACATAACTGGTTGAGTTCAAAGtacggagagagagaggataagCATAGCGTGACAACTTGGAATAAAATTTGACACGGAAAGGCTGCAAGAAACATTTTAGAAGAGCAGAAATCTACTCGATTTACTGTTTCAACATAATGGAAATCCCAGACTTGTCTTCAATGAAACTATCTGGTCGTCCTGAGTTGTTTGATTTTGAGGGTGTTTCTATGGTTCACTATTTCACTGACAACTGGGAAAAGGTGAAAAACTTTCAAGCAAGACCTGATGACATTCTAATCGCCACTTACCCTAAAGCAGGTACCACCTGGGTGTCATATATTCTAGACCTTCTCTACTTTGGTCACAATGCTCCAGAGCGCCAGACTTCCCAGCCTATCTATATGAGAGTGCCGTTCTTGGAGTCATGTTTTAAAGTGATTCCATCAGGGACAGAACTGTCTGATAATCTGCCCACTTCTCCTCGCCTCATCAAAACTCATTTGCCTGTTCAGCTAGTGCCCAAGTCCTTCTGGGAGCAGAACTCAAGGGTTGTATATGTAGCACGGAATGCAAAAGACAATGCAGTTtcctattttcattttgatcgAATGAACATGGGTGAACCTGAACCAGGAGACTGGAACACCTTCTTACAAAAATTTATAGAAGGAAAGAAAGTGTTTGGTTCATGGTTTGACCATGTCAATGGATGGTGGGAGAAAAAACAGACTTATTCTAACTTACTGTACATGTTCTACGAGGATTTGGTTGAAgaCACTGGACGCGAGGTGGAAAATTTGTGCTCCTTCTTAGGTTTGACAACCTCAGttgaagagagggagaaaataaCAAAAGGGGTTCAGTTTGATGCCAtgaaagagaacaaaatgaCTAACTACTCCACTATCCCAGTCATGGACTTCAAGATCTCACCCTTCATGAGGAAAGGTAAAGTTGGAGACTGGAAAAATCATTTCACTGTGGCACAAAATGAACAGTTCGATGAGGTCTACAAACAGAAGATGAAGAACACCACTGTAAAGTTCCGCACtgagatttaatttattatttttttaatagtttctaGTTACAGGAATTGTTTAGCTATGGGTCTTGCACCTGCAATCtgaatattcattaaaattatatgtTCCCCAATCCCAATGTACCATGCAATAAATTTGAAATGCTGCATTATTAGGAAAATGTCTGCTAATAGTGGTAAATTTGTCTTATCATATTTGTGCATAATGTTGGTGAAAggtctttcttgtttttttttttttttttcaaaatctaactttacacaaaaatacaataataataataatagtgattaGTGTCCATAGTGTAAACCTGACTGGTGCAATTCCCCAGCTTGCAGGCCAGTTCTGAGTGTTTGGATGTGGTGGATATGGTACACTACTGCATAATTTGCTGATCAGTCCAGGATCCTGGATCATCTCTTTAAAATTACACCTGATATTGTGTGATTGTTTGTTACATTATTTGAGCATCAGCTGATGAATTACCGCTGCTGTGATTAATAATGCTCCTGCTTTCCACAATTAGCGAATATCACTATGAAAACAGTACATACTATAAAGTCCAGTTTGCACAGAATGCAGAATTTTTCTGAAAagattgaataaaataatcagtCAAAATATGGCACACCACAATACAGTA

Function

NR:

description
PREDICTED: cytosolic sulfotransferase 3-like

GO:

id name namespace
GO:0008210 estrogen metabolic process biological_process
GO:0006805 xenobiotic metabolic process biological_process
GO:0006584 catecholamine metabolic process biological_process
GO:0005737 cytoplasm cellular_component
GO:0004304 estrone sulfotransferase activity molecular_function

KEGG:

id description
K01014 SULT1A; aryl sulfotransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043246765.1 True 1767 mRNA 0.38 8 23967525 23972075

Neighbor

gene id symbol gene type direction distance location
LOC122350539 sult1st3,LOC107727992,LOC107687125,LOC107687124,LOC107594958,LOC107738928,LOC107727989 coding upstream 4385 23956048 ~ 23963140 (+)
LOC122351094 sult1st3,LOC107727994,LOC107594958,LOC107727992,LOC107687124,LOC107687147,LOC107687125 coding upstream 13935 23942761 ~ 23953590 (+)
LOC122350978 gpr153,LOC107687122,LOC107693426 coding upstream 67450 23871236 ~ 23900075 (+)
LOC122350042 acot7 coding upstream 102610 23828666 ~ 23864915 (+)
hes2.2 LOC107595804,LOC107748990,LOC107687144,LOC107734829 coding upstream 215094 23750246 ~ 23752431 (+)
qars1 qars,LOC107727984,LOC107738933 coding downstream 22862 23994937 ~ 24007734 (+)
mtor mtor,LOC107564227,LOC107727986,LOC107594963 coding downstream 42072 24014147 ~ 24113382 (+)
LOC122350145 NA non-coding upstream 285693 23676434 ~ 23681832 (+)
G66418 LOC107748960,LOC107687117,LOC107691060,LOC107595771,LOC107602461,LOC107755278 non-coding upstream 344054 23620927 ~ 23623471 (+)
G66416 NA non-coding upstream 350843 23615216 ~ 23616682 (+)
G66351 NA non-coding upstream 532492 23434118 ~ 23435033 (+)
G66350 NA non-coding upstream 533780 23432809 ~ 23433745 (+)
acot7 acot7,LOC107754737,LOC107687121,LOC107693425 other upstream 163476 23752568 ~ 23804049 (+)
ndufa7 ndufa7,LOC107748992,LOC107755274 other upstream 333460 23632350 ~ 23634065 (+)
LOC122350936 LOC107710771,LOC106926566,LOC107691064 other upstream 556964 23403713 ~ 23410561 (+)
prdm16 prdm16,si:ch211-263k4.2 other upstream 565963 23054616 ~ 23401562 (+)
mfn2 mfn2,LOC107748965,LOC107602467,LOC107710790,LOC107678429,LOC107698839,LOC107595787 other upstream 980363 22973995 ~ 22987162 (+)

Expression


Co-expression Network