lzts3b (lzts3,LOC107569677,LOC107712591,LOC107661533)


Basic Information

Item Value
gene id lzts3b
gene name lzts3,LOC107569677,LOC107712591,LOC107661533
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 588798 ~ 601844 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043246776.1
TTAAAGAAGACGTAAACGTTCTCGGATCTCCCTCTGGAGGACCGCGCGCGCACTACAAACGCCTGACCGAATAGCGTGACATACACGACGCGCGTGCGCAGTCCCCGTCGGCGTTTCGGGGGGCGTCGCTGGCGTGCGGCAGAGGGGCGGGGCGAAGGTGGGTGTGTGGCTCAGCTGATACCGACTaccgtcctcctcctcctcatcatcatcacccGAGACCCGTTCCTGTCAAGACGCACGCCGCTCGGTTTTATGGACGCGACGCGAGCGGCTCGGTGAATGAACGCGGCTGACGTGACGCGCGTCGCTGTCCGCGGTGCTGAAACATGAGTGTTTCTGGGGGTCGGGCAGCTGTGACGGCCCATGCGGAGGCTCGCGGCGCTGACTGACGCTCTGGTTCCCCAGCATGGGCAGTGTGGGCAGCGGAGTGGCCGGTGAGCAGGAGTTTGCCATGAAGAGCGTGGGCACTCGCACCACCCTCCCTCGTGGCCCTCCTCTGTCCCGTCTCCACGCGCCTCCCTCCGCCTCGGACGGCTCCAGCGAAAGCACCGCCACGGATCGAGGTCAGCACAACGCCGCCTCGTCTCGACCCGGCAACGGGGACAAGGCCTCGCACAGAGCCGGAGGAGTGTCTCTGGATGCGTGCGGGAACGTGGTGGGTCACGGCACGGAGAAGAACCACGAGGTCAAGGGCAGAGATGGGAACAACAGCAAGAGAGACAGTCGCACACCGCCCAAGATCCTCACTGTGTCCGGAAAACTCGAGCAGAGTACTTCTGCTCTGGTGCGTCCGTCTGCCTTCAAGCCCGTGGTGCCCAAGAGTTTTCACTCCATGCAGAATCTGCTGGGTCAGTCGGGCGGAGGACGCTCCGCTGGCTCCGACGCTCCACAGTCCCTCTGTGAGCAGGACAGTCCGGATCGGGACCCTTCAGCCGGAAACGACGGCCCGGCCGGGATGACCGACTCCGGGAGGAACTCGCTGACCAGTCTGCCCACCATGAGCTACGGCCCCGCTCAAGCCCTGGGGCCCCTGAGCGCCTCCACCAGCCACATCAACAGACTGAGCAGCACCGCGCCGCCGCTCGACAAACCAGATAAACCCAGCTATCAGAACGGCTTGAGCGTGTCCGACAGTGGCCAGTCCTCCTCCGGAAAGAGCTGCTTATCCTATCAGAGACTGTGTCACCTGACGGACACCAGCGCCACCGTCCAGCCCTCGCCCTCCACCGACGACATCATCCAGGACCTGGAGGACCGGCTCTGGGAGAAAGAGCAGGAGGTGATCCACATGCGGCGTAACCTGGACCAGAGCGAGGCGGCCATCGTGCAGGTGTTCGAGGAGAAGCAGCGCGTCTGGGAGCGAGAGATGGAGGAGCTGAGGCAGAACTACGCCGGGCGTCTTCAGCAGGTGACCCACCGAGCCCAGCGCACCCAGCAGGCCCTGCAGACCCACATCGCCCGCCTGCAGCAGGACAAGGGCCGGCTCCAGGACGAGATCAGCACCCTGCTCGCCCAGAGAGAGGAGCTGGAGCGCAAGTGTCTGGACTACCGCAAGGAGCAGGCCGATCTCCTGCCTCGCCTGGAGGAGACCAAGTgggagCTGTGTCAGAAAGCGGGCGAGATCTCTCTGCTGAAGCAGCAGCTGCGGGAGAGTCAGAACGAGGTGACGCAGAGGGCCGGAGAGATGGTGGCCCTCAGGGGCCAGCTGAAGGAGCTCAACGCCCAGATGAAGGAGCGCGAGGAGACCATGATCGGCCTGAAGGACTCGTACACCAACAAGAGCCGCGAGCTGGAGAGATGTGAAGGAGAACTGAAGAGGACGCTGACAGAGGTGTCGATGCTGCGAGACAAGCTGGTGGTGTTCGAGGCCGAGGTGCTGGGTCTGAAGCGGGCTCTGAGCGAGCTGAGCTGCAGGAACGATCACGCCGTGTGCCTGCGGGACATCAGCGGCAGCAGCAGCTTGCCCTGGGCCGGCCTGCACTCGCCCCGCTCGCCCGACGCCCTGCCCCTCGACAGCTTCCTCAGCCTGCAGAGCGACGAGGCCAAGGCGCAGCGGCAGGAGGCCGGAGAGCTGCGGAGGCAGCTGGAGCGACTGCAGGGCGAGCTGTGTCTGGAGCGGCAGCAGAGAGAGCGCCAGGCCCTCACCTTCGCCCAGGAGCGCCACACCTGGCAGGGCGAGAAGGAGCGGGTGCTGAAGTACCAGGCCCAGCTGCAGATCAGCTACGTGGAGACGCTGCAGAGGAACCAGGCGCTGGAGGAGCGGGTCGGCCAGCTCGGAGCCAAACTGGGCACCACGCCCGGATCGCCCGGATCGTCGCCCGTCAGCCTCTCCATCCCCGTCCTGGGCGAGAAAGAGCGTGTGCTGAAGTATCAGGCGCTGGAGGAGCGGGTCGGATCTAAACTGGGCACCAGGCCCGGCTCGCCCGTCGGCCTCTCCCTCCCCGTCCCGCTGACCGCCGGAGATCCCAAACCGCCCGCTCTGCATCAGCTGGCTCCTCCGTGGCCCGGACCTACTCGCCTGGAGCGGATCGAGTCCACGGAGATCTAGACGCGAGACAATCGACGGCGGACGGTTCTGCGTGAGATGACAGAATAACGCGGTTACGAATCAAAAGGGACGCGCTTTCAGCTTTCAAACCTTCTGACATCTCTTTTGGTCATCGGCGAAACGGAGGAGAAGCGCTTCGCTGGTCTGTGCGGGCCGCACGGGAACGGAGTTTGGAATAATTAGGATTCgttaatgctttaaaagtagTCTCCTCTGCTCGCCAGGACCGCATTCATACAGCGGAAAGTgcgaaatatcattacaatttaaaatatctgtctTCTGTGGAAGCCgtgtaataaaagaaaaaccttgCCTTTGCAATTTTACATAAATCACAATCGTTTTTTTCCTgccacgaaaaaaaaaaaataataataataaaaggtggTCACAATTCTAGTTTTTCCTGAGCTGATAATAAAGCCTTTTTTCCTTCGAATTGAGCGAGATACAATTTTGCAACACGCTTCcatagtaatacattttaaatatcatttactttcagcatcattactccgctcttcagtcacatgatccttcagaaatcattaaaatatactgatttaccGCTCAACCAAACAGTTCTGATAACTATCAGTTTACGTTTTTGTGTAAACTGTGATGCATGTTCAtgcaattattcaaaataaacgtcCTTTGTAACATTGCAAACGTCTTTACTGTTACAACCGATCAGATCAAAGCATCCTTACTGAACTAAAGCATTCATCCCTTTCCGTTTTTTTGGCTCAATAACCTATTACGGCTTACCACAAAAATACTGCGCAGCACAGCTGTTGAACATTGATAATGATCAGAAACGTGTCTCGAGCATTAAATCGATTTCTGAAGGGCCGCGTGACGCcggagactggagtaatgacgcttaaaaatcacagaaataaatgtaattgtaaaatatattcgagtagaaaacagctcatttgaattgtaataatatgtcACATTTTTACTGGATAAATGCAGTCCTGCTGAGCGGAAGAGACCCGCGGAGAAAGGCGTTTTGTTCCCGAAGGTGTTGGTTCGGTGAGGTTTCGTGTTTCAGGGACGCCGGGGAGCATCGGTCAACAGACCACAAACAGAGGGCTCCTATCTGCAGGCAGAATTACTAACATTTGGCTGAAATTGAAACCCGAACTTGCTTTCCCAATTCTGCAGCGATGTTTCTGGACGGTTCTGAGAGCTGCTGCTATGTTCAGTGTGTTGTGGGTAGACAGGCAGGCCGTGAAAACGATGGTTATTTATGTGAAATCGTTATTTCCAGTATACCGACATATTGCGTGTTCATATTTTGAGAAGACGAGACATGCTGTCATTTCGCCCGTTCCGATTATTGTGAATAAAGCCGCtgttttagctttgtttttctgtaacaTGTAAGACTTTTCACCGATGAAACGGTTTAAACGCATCAGCGGTTTCCAAAACCATATTCCTTTTGGTGTAGTTCTGAtgtaattatttgatttgacgatgtaattaattgatttaGAGATCAAATGCTATGTTTTTATACTTCTATTGTTCGTATTTATGTTACTGTAATGATTTGCGTAAAAGCATATCCGGTcgaaaacacattaaatgatAAAGACACAA

Function

symbol description
lzts3 Predicted to enable PDZ domain binding activity and protein self-association. Predicted to be involved in protein homooligomerization and regulation of dendritic spine morphogenesis. Predicted to be located in postsynaptic density. Predicted to be active in dendritic spine.

NR:

description
PREDICTED: leucine zipper putative tumor suppressor 3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043246776.1 True 4174 mRNA 0.55 7 588798 601844

Neighbor

gene id symbol gene type direction distance location
ubox5 NA coding downstream 2097 581029 ~ 586701 (-)
LOC122350794 LOC107661539,LOC107704586,LOC107726870,LOC107568101,LOC107581163 coding downstream 12620 572583 ~ 576178 (-)
slc35d2 slc35d2,LOC107570982,LOC107570985 coding downstream 25584 558256 ~ 563214 (-)
fbxl17 fbxl17,LOC107704582,LOC107712428,LOC107661528,LOC107737136,LOC107570989 coding downstream 56410 362578 ~ 532388 (-)
efna5b efna5,efna5b,LOC107721028,LOC107709298,LOC107692204,LOC108265807,LOC107661535,LOC100702629 coding downstream 293528 202147 ~ 295270 (-)
sprb spr,LOC107661521,LOC107569671,LOC107726883,LOC107712600,LOC107568099 coding upstream 5606 607450 ~ 610914 (-)
fabp1b.1 fabp1b.1,LOC107573351,LOC107726869,LOC107704576,LOC107579792,LOC107712467,LOC107661522,LOC103043953 coding upstream 28510 630354 ~ 631145 (-)
rnf165b rnf165b,rnf165,LOC107726876,LOC107569673,LOC107712483,LOC107704592 coding upstream 111522 713366 ~ 724970 (-)
spinb zgc:110697,LOC107726871,LOC107704578,LOC107577825 coding upstream 141349 743193 ~ 747336 (-)
lrrc2 lrrc2,LOC107697579 coding upstream 158374 760218 ~ 770520 (-)
G59739 NA non-coding downstream 36916 514767 ~ 551882 (-)
G59750 NA non-coding downstream 40887 545919 ~ 547911 (-)
G59688 NA non-coding downstream 352141 236074 ~ 236657 (-)
G59654 NA non-coding downstream 504945 83574 ~ 83853 (-)
G60016 NA non-coding upstream 13437 615281 ~ 617472 (-)
G60036 NA non-coding upstream 58591 660435 ~ 661098 (-)
G60003 NA non-coding upstream 121346 723190 ~ 725000 (-)
G60061 NA non-coding upstream 153780 755624 ~ 756643 (-)
G60079 NA non-coding upstream 214617 816461 ~ 820768 (-)
ccl27a NA other downstream 17825 565886 ~ 570973 (-)
LOC122349987 LOC107661519,LOC107712504,LOC107726877,LOC107704593,LOC107573347,LOC794598 other upstream 121301 723145 ~ 731844 (-)
csgalnact1b LOC107712620 other upstream 130949 732793 ~ 739372 (-)
G60098 NA other upstream 533557 1135401 ~ 1138152 (-)
commd10 commd10,LOC107728250,LOC107663591 other upstream 538854 1140698 ~ 1159286 (-)
LOC122350266 dgcr6,LOC107572069,LOC107721026,LOC105899531,LOC103029434 other upstream 747327 1349171 ~ 1356953 (-)

Expression


Co-expression Network