sprb (spr,LOC107661521,LOC107569671,LOC107726883,LOC107712600,LOC107568099)


Basic Information

Item Value
gene id sprb
gene name spr,LOC107661521,LOC107569671,LOC107726883,LOC107712600,LOC107568099
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 607450 ~ 610914 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043246783.1
tcactataaaaatgttcatataaaaaaagtatcgtttaaataatttagggaaaaaaacgaaattgcaaaaattaaaataataaataataataaaataagtcaaTCGGTATATTCTCATGACTTCTGATGCTGAAAAGCACAGAAATAGATGACACTTTAGCAcgcattcacacagaaaacagcccTTTTAAGATTCTACAAATATTCCCGTTTTTTCTGTGACTTCAGAAAATCTTGATTCGTCCCATCGTCGCTCCAGGCCTTTTCTATCACGCAGAACTCATCGCGTTTTTGTGCATGATCCGTGCATGAAATGCATCGGTTCCTCTCGGGGCGCCTGGTTTTAAAGCGGAGCGCCCCGCTGAGACGCACCATTCTTCCGGAGGCATGGAAGACGGGATCTCTCCGGAGGCCAGGGATCTGGGCAGGGCTCTGTGCGTCGTCACCGGAGCGTCCAAAGGCTTCGGCCGGACGCTGGCCTTCCAGCTCAGCTGTCTCCTGAAGCCCCGGTCCGTCCTGATGCTGGTCGCTCGCAGCTCGGAGCAGCTCCAGCAGCTGAAGAAGGACATCGTAAACCTGCACGGACAGAGCGCGCTGGACGTCCGCTGCGTACGGGCCGACCTGGAGAAGAAGGAAGGCGTGGAAAAAACGGTTCAGGCTGCTAAAGAGACTTCGGTGTCAGAAATGGAGCACATACTCCTGATCAACAACGCAGCGTCTCTGGGCGACGTGTCTCGCTTCGCTCTGACCTTCACGGATCCACTCGAGGTCAACCGTTACCTGTCTCTGAACGTGAGCGGAGCTCTGTGTCTGACGGCCGGCGTCCTGCAGGCCTTCCCTCGGCGTCTGGGTCTCCGGCGCTCCGTGGTCAACATCAGCTCTCTGTGTGCGCTCAAACCCTTCCCGTCCTGGGTGCTGTACTGCTCCGGGAAAGCCGCCCGAGACATGATGTTCCGGGTGTTAGCCGAGGAGGAGCCGGACGTAAGAGTGCTCAGCTACGCACCCGGTCCTCTGGACACAGACATGCAGCTTCAGGCGAGGCGTTCCTCGGGAGATCTTCAGCTCAGACGCTCCTTCTCCTCCATGTTCTCCGAGGGTCAGCTGCTGTCCTGCGAGGAGTCCGGAGCCAAGCTCATGAAGCTCCTGCTGGACGACCGCTTCCGCTCCGGAGCGCACCTGGACTTCTACGAGCTCTGAGGCCCGCGAGCTCCCCCGCTGTACATACACCCCgcttaaaaatctataaatctgGTTAGAAATATGCTGCGTTTTTATAAAAGGAATAAACGAACGACTGTTCTGCCGGTCCGTGTCTTTCACTGATGAAGCAGCTGAGGACCTCTAGTGGAGatcacgcacaaacacacagagaaagactgaaatgtaaaaacagggtcagatttgatttaaaatgttttatgtagtaAATGAGAAGGgttctaattaatattcataatctGAGACAAAATCGATCAACAGTTAATCAACGGTTTTCAATAAGTGAGGATTTTGTAAAAGCATAGAATTaagttttgtgttgtttttggtgCTGATGTTTTTTGACGTGATACGAGCAGAttcagataataataaaaaaaaaaattatttgggggataataaattatgatatataacaggcataataaaaaaaagcattattaatgTAGAGAAGGAAAGAATTTAattagtattaaattaaatcaacaattcaataaaaaaaattatgctaacaccatgttaaaatattgtttattcatttac

Function

symbol description
spr Predicted to enable protein homodimerization activity and sepiapterin reductase activity. Involved in nitric oxide biosynthetic process. Located in cytosol and nucleoplasm. Implicated in dystonia and sepiapterin reductase deficiency.

NR:

description
PREDICTED: sepiapterin reductase-like

GO:

id name namespace
GO:0006729 tetrahydrobiopterin biosynthetic process biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0004757 sepiapterin reductase activity molecular_function

KEGG:

id description
K00072 SPR; sepiapterin reductase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043246783.1 True 1761 mRNA 0.47 3 607450 610914

Neighbor

gene id symbol gene type direction distance location
lzts3b lzts3,LOC107569677,LOC107712591,LOC107661533 coding downstream 5606 588798 ~ 601844 (-)
ubox5 NA coding downstream 20749 581029 ~ 586701 (-)
LOC122350794 LOC107661539,LOC107704586,LOC107726870,LOC107568101,LOC107581163 coding downstream 31272 572583 ~ 576178 (-)
slc35d2 slc35d2,LOC107570982,LOC107570985 coding downstream 44236 558256 ~ 563214 (-)
fbxl17 fbxl17,LOC107704582,LOC107712428,LOC107661528,LOC107737136,LOC107570989 coding downstream 75062 362578 ~ 532388 (-)
fabp1b.1 fabp1b.1,LOC107573351,LOC107726869,LOC107704576,LOC107579792,LOC107712467,LOC107661522,LOC103043953 coding upstream 19440 630354 ~ 631145 (-)
rnf165b rnf165b,rnf165,LOC107726876,LOC107569673,LOC107712483,LOC107704592 coding upstream 102452 713366 ~ 724970 (-)
spinb zgc:110697,LOC107726871,LOC107704578,LOC107577825 coding upstream 132279 743193 ~ 747336 (-)
lrrc2 lrrc2,LOC107697579 coding upstream 149304 760218 ~ 770520 (-)
srp19 srp19,LOC107704595 coding upstream 172734 783648 ~ 786422 (-)
G59739 NA non-coding downstream 55568 514767 ~ 551882 (-)
G59750 NA non-coding downstream 59539 545919 ~ 547911 (-)
G59688 NA non-coding downstream 370793 236074 ~ 236657 (-)
G59654 NA non-coding downstream 523597 83574 ~ 83853 (-)
G60016 NA non-coding upstream 4367 615281 ~ 617472 (-)
G60036 NA non-coding upstream 49521 660435 ~ 661098 (-)
G60003 NA non-coding upstream 112276 723190 ~ 725000 (-)
G60061 NA non-coding upstream 144710 755624 ~ 756643 (-)
G60079 NA non-coding upstream 205547 816461 ~ 820768 (-)
ccl27a NA other downstream 36477 565886 ~ 570973 (-)
LOC122349987 LOC107661519,LOC107712504,LOC107726877,LOC107704593,LOC107573347,LOC794598 other upstream 112231 723145 ~ 731844 (-)
csgalnact1b LOC107712620 other upstream 121879 732793 ~ 739372 (-)
G60098 NA other upstream 524487 1135401 ~ 1138152 (-)
commd10 commd10,LOC107728250,LOC107663591 other upstream 529784 1140698 ~ 1159286 (-)
LOC122350266 dgcr6,LOC107572069,LOC107721026,LOC105899531,LOC103029434 other upstream 738257 1349171 ~ 1356953 (-)

Expression


Co-expression Network