LOC122350377 (LOC107562778,LOC107717538,LOC107669657,LOC107711943,LOC107679735,LOC107591842)


Basic Information

Item Value
gene id LOC122350377
gene name LOC107562778,LOC107717538,LOC107669657,LOC107711943,LOC107679735,LOC107591842
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 13286754 ~ 13298975 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043246790.1
AAATGCGAACCGCAAACGGCCCCCTCAACACCTGGAAACCCGCACGATTCTGATAACTGCGACTCAGGGGTGAAGTTCGGACCTTCCCCCTTACGTGCGCCTAGTTATGTTTTTTAACAGATGCAAGCGAACGACACAAAATTGGTTTTCATTGTGGATTAGTAATAAAACCTCTTAAGTTTCGTTTCTTCCGTCGCTATCCGCTTCCGCAGAAACAGCTGTCCTTGCTTCGTGAGAGGCAGAGTAAATCATAAAACGACGGAGTACATCACCACAGAGCTCACGACACCAGAGCCGAGAAACATGAACAggagaaacaggaaaaaacagcTCTCTAGGGATGATTTGCTTAGCGTTGGATTTGACTTTATAGAATTTCTGTCGGAAAGCGAAAGGAGATCCATTACTGATAGAATAACTCTTAAAACCATCTATAATGAAGAGTTCCGACACAGGGATGGAGTCAGAGACCCAAACTTCTCTTCAGTCCTCTTTGTGTTGAGAAACAGCAGCAAAGCGCGCATCACCAGATCAGGACacgtttactttaaaaataatGTCCGAGTGCTGCACGATCAATGGTTTAGACCCTGTCACAGACAACAAAATCAAGCTACTCCACCTCTGAGTAACGGTAGCTCATCACCCCCCGCTAGTGACCAGATTCCTGACCCATCGTCGGTGCCAGGGCCAGAAGATGGAGTCAGAGGAAGGAGGACACTGTCAAAAGCCATACTGAAGAGAATATACACTACAGAAAGGACTGTGTTTATTGCTGATAAAAGTGGGGTGCGGGTATCTTCAGAACTGCAGACAGAGGATGGCATGATTCAGCTGTTTGTGGAGAAGGCAGAAATTCGTGAGCTAAAGTTGTTTGTGGAGAACACAGGTCAGGATGCTGTGTATTTCACATACTACACTGCTCTTCATTGGCTGCAGTATTTCACTCTGGAAGACAGCAGAAGAGTCACACGTAACAATCCACTCCTTCTGGAGCCATatgagaAGTACGAGGTGACCTTAAGATTCAAAGCAGAACACATAGGAGTCTATCCTGCCACTCTGGCATTCGAGTTCATGGAAAACACCCAACCCGCCACCCGTCCTTTCCACATTGTTCGGTTCATTCAGGCAGAATACAGATCTGAGCTTGCAGCTTTGCTGGGTCCAGAAGAACCATTCAGACCTAAGAGGCTTGAGACATATGAACCTGCGAGGTGCAACATAGATGAGGGGGTTCAACCTGAGAGTTCTGCTCGAAACTTTTTGAAGTTTGTGGTGCCACTGGATAACTACGCTCGTCCTTCTTACATCTCTGACTTAGCCGAGGTCCTAAAAGGCAGCCGTTCTTTCCCAAAGCTCCAGGAAAAGAAGTTACTTCTAGAGAGCGATCTGGGTTTACATAACTATAAGGAGCGCTTTGATCTACTACTGTACCTGGAAGAAGATCAAATGTGTCTAGACATCAAGAGGTATAACAAAGATGATGTGTCCATGGTGAGAGACCGTGAGAACAAACGGCTGCTGGTCTTAGAGCTCCCTGGTGTATCAGAGAACAGACCATCAGTCCTGAGAGGAGATCACCTACTTCTCACCAAGAGTGAAGAGGTTAATTTCTCAACTGTGACCAAATACAAAGGCTACGTCCATAGAGTGGAACTGGATCAAGTCAAGCTGGGCTTCTCTCAAAGACTACTTAATGGTTTCATAGATAATATGAAATTCCACGTGGAGTTCACAGTGAATCGTCTCCCGTTAAAACTGCAACACAGAGCAGTGCACATGGCGGTCCAGCATGAATTAGGTGATGTGCTGTTCCCTGTGGGCTCAAGGAGCTTGAACCCCGTGCATCCACCTGCACTGAGGCTGTTTGATCAAAAGCTGGAAAAGAACGATGAACAGAAAAATGCAGTATGCAACATTGTGGCCGGTACGTCCAAGCCGGCGCCGTACATGGTGTTTGGACCTCCTGGCACTGGTAAAACTGTCACGATCGTGGAGGCCATCAAACAGGTGGAGAAGAATATACCTGGTGCCTGCATCCTAGCTTGTGCTCCATCTAACAGTGCAGCTGATCAGCTGTGTGAAAAGTTGATCACTAGTCAACATGTTGATGCACAGAAAATATACAGAGTCTATGCCAGCTCACGTAATCCAAGAGATATCCCTAAAGTCCTAGAGAAAAACAGTAATCTGGAGGGAGAGATTATTATTTTCCCATGTAAAGAGGATCTAATGTCCTACAAGATCCTGGTCTGCACTCTGGTCACCGCTGGCAGACTGGTCAGCGGGGGTTTTCCTAAAGGTCATTTTTCACATATCTTTGTGGATGAGGCAGGACATGCTGTGGAGCCAGAGACCATCATCAGTGTGGCAGGACTGCTGAATGCAAAGACTGGACAGCTTGTTTTGGCCGGAGATCCTAAGCAGCTGGGGCCAATCCTGAGATCTCCTTTTGCCATTAAATACGGACTTGgtCTATCCTTGCTGGAGAGGCTGATGACACAGAATGAACTTTACCAGAAAGGTACTACCGGATATGACAACTGTTATGTAACCAAGCTGCTGCGCAACTACAGGTCTCATCCATCCATTCTGAAGATTCCTAATGAGATGTTCTATGATGGGGAGTTGGTGGCATGTGCAGATGAAATTATCTCCCGCCAGTACTGCACGTGGGAGCACCTTCCAAAAAGAGGATTTCCTGTGATTTTCCATGGAGTGATCGGAAAGGATGAGAGGGAGTCGAACAGCCCCTCCTTTTTCAACACTTCTGAAATTGATATCATAATTGACTACCTGAAGAAGCTGCTCCTGACACAGGCCAAGAAGGGCATTGCAAAAATCTTCCCCAAAGAGATTGGCATTATCGCCCCCTACAGGAAGCAggtgGAGAAAATCAGGAAGGCCATCAAGATGCACAAGGATCTTAAATCCTGTTCGGGTATTGAGGAGCTGAAGgTTGGCTCCGTGGAGGAGTTTCAAGGTCAGGAGAGGAAAGTGATCATTGTGTCAACTGTTCGCAGCGACAAGAACCACATCAATTTGGATGAAAAATTCAACATTGGGTTTCTGAAGAATGAGAAGAGGTTTAATGTGGCAGTGACGAGAGCAAAATCCCTGTTAATTATGGTGGGAAACCCCATCATTCTACAGAGAGACGCAGCCTGGGGCCGGTTTATTAATTACTGCATTGAGGAGGGAGGTTATACGGGATATGATATTTCCAATTTGGAGGAAACAGAGGCGGTTGTTGAGCGCCTGCTCGCACTAAACATCTGTGAGGAGATCATAGTGGAAACAGAGGAGAGTGTGGTCCAGCAATATCTGAATCCTGAGTGGAGACATGACCATTAGATGAAGTGCCGCCATTAAAGTGCCTCCCATTCCCATTCATAGCCTAACCACACCCCTTGCCCTTCCTCCTGAAGTTAGACTTCATTTTAATGCTAAAACTGGATTATGATATGTAAACATTGCGTTAAAGTAAAGGGGTATTTTGTTCTTAGTAATCGGTGCTGTAAACGTTTGAGAAACTTCAGCATCCATAATACACTAGACTCATTCCTGTATGGTAATATCACGGAAAATTCTCAGGGCTTTGCATGCCGTGTCACCTATAATGATTGAAACGTtgtattatatgttttaatgaaaatgcattcatcTGAAATCCTCCGCAGTTGGAATACATGGTTGATAATTCACTGGTTACTGCCAAAAAAAGccttgtttttataaaattatcaaacaacagaaatgttattttaattggtGTTGATAATGGTTTTGTTTGTGGACCCACTGGATTGTCTGTAAATTGCAAATAGAGTTGAAGGATTGCATCAATGCATTGTCAAACACATCAAGACTTTTAATGGAAGTATTGTAAAATGGAGGATGTTGAATCAcacattaatgtaaaatttgTACATGACACGTATGGGTTGTTATTGACCATTAAACTGTATTACGCCTTA

Function

NR:

description
PREDICTED: putative helicase mov-10-B.1

GO:

id name namespace
GO:0035279 mRNA cleavage involved in gene silencing by miRNA biological_process
GO:0000932 P-body cellular_component
GO:0005524 ATP binding molecular_function
GO:0003723 RNA binding molecular_function
GO:0004386 helicase activity molecular_function

KEGG:

id description
K18422 MOV10; helicase MOV-10

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043246790.1 True 3980 mRNA 0.45 22 13286754 13298975

Neighbor

gene id symbol gene type direction distance location
mov10b.2 mov10b.2,LOC107711942,LOC107679724,LOC107591756,LOC107717538 coding downstream 76 13276193 ~ 13286678 (-)
slc16a1b slc16a1b,LOC107669643,LOC107717534,LOC107591766,LOC107711946,LOC107679710,LOC108425094 coding downstream 222231 13045401 ~ 13064523 (-)
kazna kazna,LOC107669642,LOC107556484,LOC107591771,LOC107711950,LOC107717500,LOC107680131 coding downstream 304532 12948703 ~ 12982222 (-)
tmem51a tmem51a,LOC107717531,LOC107669600,LOC107556479,LOC107679674,LOC107711951,LOC107591770 coding downstream 338163 12942690 ~ 12948591 (-)
sema3b LOC107717529,LOC107556489,LOC107669651,LOC107591772,LOC107711952 coding downstream 367363 12890474 ~ 12919391 (-)
cttnbp2nlb LOC107717506,LOC107669604,LOC107562782,LOC107679769,LOC107711913,LOC107591755 coding upstream 52841 13351816 ~ 13369026 (-)
ddx20 ddx20,LOC107669638,LOC107751451,LOC107594523,LOC107711848,LOC107679786,LOC107556298 coding upstream 226598 13525573 ~ 13531588 (-)
rap1aa rap1aa,rap1a,LOC107594522,LOC107679791,LOC107556321,LOC107751450,LOC101074250 coding upstream 246331 13545306 ~ 13551399 (-)
LOC122350013 NA coding upstream 253493 13552468 ~ 13558463 (-)
LOC122350012 NA coding upstream 259906 13558881 ~ 13561981 (-)
G63735 NA non-coding downstream 11886 13261692 ~ 13274868 (-)
G63711 NA non-coding downstream 155537 13128190 ~ 13131217 (-)
G63631 LOC107591782,LOC107669630,LOC107711933,LOC107679511 non-coding downstream 486011 12797379 ~ 12800743 (-)
G63610 NA non-coding downstream 538601 12747899 ~ 12748153 (-)
G63588 NA non-coding downstream 613897 12671344 ~ 12672857 (-)
G63745 NA non-coding upstream 33189 13332164 ~ 13332387 (-)
G63751 NA non-coding upstream 48649 13347624 ~ 13350271 (-)
LOC122350567 NA non-coding upstream 321017 13619992 ~ 13682456 (-)
G63866 NA non-coding upstream 389203 13688178 ~ 13693222 (-)
G63867 NA non-coding upstream 400682 13699657 ~ 13700068 (-)
tafa3b si:ch211-254n4.3,fam19a3,LOC107711931,LOC107591764,LOC107562776,LOC107669582,LOC102289964,LOC104918365,LOC106582736,LOC105921069,LOC106517667,LOC108231490,LOC106937909 other downstream 40624 13185867 ~ 13246130 (-)
zmynd12 zymnd12,LOC107591768,LOC107711949,LOC107679700 other downstream 203382 12985654 ~ 13083372 (-)
foxp3a foxp3a,si:ch211-167b20.8,LOC107669635,LOC107731227,LOC107550508,LOC107711972,LOC107679368,LOC107591799,LOC107591800 other downstream 782601 12489197 ~ 12504153 (-)
kcnq2a LOC107679259,LOC107668096,LOC107731192,LOC107550457,LOC108442249,LOC108265949,LOC107711924 other downstream 923650 12342160 ~ 12363104 (-)
G63385 NA other downstream 1022221 12263694 ~ 12264533 (-)
mc3r mc3r,LOC107751459,LOC107669608,LOC107711834,LOC107680356 other upstream 417653 13716628 ~ 13720514 (-)
G63933 LOC107556304,LOC107751435,LOC107594508 other upstream 510453 13809428 ~ 13863250 (-)
LOC122350784 zgc:162939,LOC107602843,LOC107674500,LOC107724903 other upstream 1086625 14385600 ~ 14455243 (-)
slc20a1a slc20a1a,LOC107724894,LOC107711884,LOC107686402,LOC107667554,LOC107602858,LOC108440301 other upstream 1424737 14723712 ~ 14731391 (-)
G64228 NA other upstream 1480556 14779531 ~ 14781710 (-)

Expression


Co-expression Network